Os11g0106100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os11g0106100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 269.45 | 0.771 | 5.51 | 4.57 | 0.901 | -1.86 | 1.34 | 2.34 | 0.363 | 19.8 | 81.03 | 1528 | -- | -- |
| 277.78 | 0.776 | 5.53 | 4.37 | 0.905 | -1.68 | 1.25 | -- | 0.348 | 20 | 81.48 | 1519 | -- | -- |
| 273.72 | 0.771 | 5.51 | 4.53 | 0.888 | -1.87 | -- | 2.25 | 0.35 | 20.5 | 80.15 | 1505 | -- | -- |
| 281.07 | 0.781 | 5.55 | 4.29 | 0.883 | -1.67 | -- | -- | 0.309 | 20.8 | 81.15 | 1477 | -- | -- |
| 317.39 | 0.83 | 5.48 | 4.53 | -- | -1.9 | -- | 2.29 | 0.354 | -- | 81.09 | 1486 | -- | -- |
| 354.23 | 0.882 | 5.52 | 4.08 | 0.896 | -- | 1.21 | -- | 0.404 | 20 | -- | -- | -- | -- |
| 357.31 | 0.885 | 5.52 | 4.04 | 0.894 | -- | -- | -- | 0.402 | 20.6 | -- | -- | -- | -- |
| 324.97 | 0.84 | 5.51 | 4.31 | -- | -1.73 | -- | -- | 0.33 | -- | 82 | 1477 | -- | -- |
| 737.6 | 1.26 | 5.6 | -- | 0.906 | -1.4 | -- | -- | 0.0122 | 20.5 | 94 | 1587 | -- | -- |
| 402.36 | 0.937 | 5.5 | 4.04 | -- | -- | -- | -- | 0.394 | -- | -- | -- | -- | -- |
| 787.62 | 1.31 | 5.62 | -- | 0.885 | -- | -- | -- | -0.0482 | 21 | -- | -- | -- | -- |
| 781.63 | 1.3 | 5.6 | -- | -- | -1.39 | -- | -- | -0.0224 | -- | 94 | 1501 | -- | -- |
| 832.46 | 1.35 | 5.6 | -- | -- | -- | -- | -- | -0.0541 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 266.21 | humidity | 70 | 1440 | < th | dose independent | sin | 14 | NA |
| 2 | 266.44 | humidity | 80 | 1440 | < th | dose dependent | rect. | 13 | 8 |
| 16 | 267.46 | humidity | 80 | 1440 | < th | dose dependent | sin | 17 | NA |
| 39 | 268.07 | humidity | 50 | 1440 | > th | dose dependent | rect. | 13 | 8 |
| 63 | 268.47 | humidity | 70 | 1440 | > th | dose independent | sin | 14 | NA |
| 80 | 268.76 | humidity | 70 | 1440 | < th | dose independent | rect. | 15 | 17 |
| 112 | 269.29 | humidity | 70 | 1440 | < th | dose independent | rect. | 15 | 5 |
| 123 | 269.30 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 2 |
| 167 | 270.13 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 232 | 271.00 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 2 |
| 323 | 271.61 | humidity | 80 | 1440 | < th | dose dependent | no | NA | NA |
| 329 | 271.70 | humidity | 50 | 1440 | > th | dose dependent | sin | 20 | NA |
| 357 | 271.86 | humidity | 70 | 1440 | < th | dose independent | rect. | 11 | 21 |
| 362 | 271.94 | humidity | 70 | 1440 | < th | dose independent | rect. | 11 | 9 |
| 390 | 272.06 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 398 | 272.20 | humidity | 70 | 1440 | > th | dose independent | rect. | 15 | 17 |
| 400 | 272.24 | humidity | 80 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 432 | 272.66 | humidity | 80 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 454 | 272.82 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 21 |
| 485 | 273.18 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 16 |
| 486 | 273.18 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 18 |
| 489 | 273.19 | humidity | 70 | 1440 | > th | dose independent | rect. | 15 | 8 |
| 490 | 273.19 | humidity | 70 | 1440 | > th | dose independent | rect. | 15 | 12 |
| 491 | 273.19 | humidity | 70 | 1440 | > th | dose independent | rect. | 15 | 14 |
| 495 | 273.20 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 12 |
| 509 | 273.25 | humidity | 70 | 1440 | > th | dose independent | rect. | 15 | 5 |
| 537 | 273.39 | humidity | 70 | 1440 | > th | dose independent | rect. | 16 | 22 |
| 665 | 274.04 | humidity | 70 | 1440 | < th | dose independent | rect. | 15 | 22 |
| 892 | 275.75 | humidity | 70 | 1440 | < th | dose independent | no | NA | NA |
| 955 | 275.86 | humidity | 70 | 1440 | > th | dose independent | rect. | 24 | 23 |
| 959 | 275.88 | humidity | 70 | 1440 | > th | dose independent | rect. | 6 | 23 |
| 961 | 275.89 | humidity | 70 | 1440 | > th | dose independent | no | NA | NA |
| 963 | 275.89 | humidity | 70 | 1440 | > th | dose independent | rect. | 7 | 20 |
| 970 | 275.89 | humidity | 70 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 971 | 275.89 | humidity | 70 | 1440 | > th | dose independent | rect. | 21 | 23 |
| 982 | 275.92 | humidity | 70 | 1440 | > th | dose independent | rect. | 7 | 15 |
| 987 | 275.92 | humidity | 70 | 1440 | > th | dose independent | rect. | 4 | 18 |