Os11g0106000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os11g0106000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 121.37 | 0.518 | 8.95 | 1.6 | 1.72 | 3.11 | 1.93 | -0.11 | -0.28 | 8.57 | 25.17 | 287 | -- | -- |
| 121.36 | 0.513 | 8.95 | 1.58 | 1.71 | 3.11 | 1.91 | -- | -0.278 | 8.6 | 25.26 | 284 | -- | -- |
| 133.34 | 0.538 | 8.95 | 1.62 | 1.71 | 3.12 | -- | 0.111 | -0.284 | 8.6 | 25.25 | 282 | -- | -- |
| 133.25 | 0.538 | 8.95 | 1.65 | 1.72 | 3.11 | -- | -- | -0.272 | 8.66 | 25.3 | 264 | -- | -- |
| 227.3 | 0.702 | 8.95 | 1.9 | -- | 3.81 | -- | -0.461 | -0.138 | -- | 29.95 | 550 | -- | -- |
| 263.14 | 0.76 | 9.08 | 0.794 | 1.95 | -- | 1.96 | -- | -0.916 | 7.82 | -- | -- | -- | -- |
| 274.22 | 0.775 | 9.09 | 0.844 | 1.95 | -- | -- | -- | -0.919 | 7.76 | -- | -- | -- | -- |
| 227.01 | 0.702 | 8.96 | 1.86 | -- | 3.86 | -- | -- | -0.117 | -- | 29.52 | 542 | -- | -- |
| 196.97 | 0.654 | 9.02 | -- | 1.76 | 2.41 | -- | -- | -0.588 | 8.37 | 25.26 | 272 | -- | -- |
| 480.7 | 1.02 | 9.13 | 0.869 | -- | -- | -- | -- | -0.891 | -- | -- | -- | -- | -- |
| 293.01 | 0.801 | 9.11 | -- | 1.96 | -- | -- | -- | -1.01 | 7.73 | -- | -- | -- | -- |
| 308.81 | 0.818 | 9.04 | -- | -- | 3.23 | -- | -- | -0.467 | -- | 30.26 | 522 | -- | -- |
| 500.61 | 1.04 | 9.16 | -- | -- | -- | -- | -- | -0.988 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 117.50 | temperature | 25 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 8 | 121.38 | temperature | 25 | 270 | < th | dose dependent | rect. | 14 | 23 |
| 12 | 121.63 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 14 | 121.72 | temperature | 25 | 270 | < th | dose dependent | rect. | 11 | 23 |
| 23 | 122.80 | temperature | 15 | 270 | > th | dose dependent | sin | 9 | NA |
| 29 | 123.26 | temperature | 25 | 270 | < th | dose dependent | rect. | 8 | 23 |
| 65 | 129.10 | temperature | 25 | 270 | < th | dose dependent | rect. | 3 | 23 |
| 74 | 130.13 | temperature | 25 | 270 | < th | dose dependent | sin | 8 | NA |
| 86 | 131.57 | temperature | 25 | 720 | < th | dose dependent | sin | 13 | NA |
| 97 | 132.64 | temperature | 25 | 720 | < th | dose dependent | rect. | 16 | 15 |
| 98 | 132.65 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 12 |
| 112 | 133.41 | temperature | 25 | 720 | < th | dose dependent | rect. | 9 | 20 |
| 114 | 133.46 | temperature | 25 | 270 | < th | dose dependent | rect. | 21 | 14 |
| 234 | 137.97 | temperature | 25 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 265 | 138.56 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 274 | 138.80 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 387 | 141.74 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 403 | 142.05 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 404 | 142.07 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 6 |
| 427 | 142.31 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 7 |
| 451 | 142.60 | temperature | 15 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 485 | 142.90 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 570 | 143.64 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 624 | 144.13 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 725 | 144.85 | temperature | 20 | 270 | > th | dose independent | rect. | 17 | 23 |
| 749 | 145.00 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 983 | 146.74 | temperature | 20 | 270 | > th | dose independent | rect. | 4 | 23 |