Os11g0105600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os11g0105600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 175.62 | 0.623 | 6.14 | 0.518 | 2.43 | -1.51 | 2.24 | 1.17 | -0.194 | 6.89 | 20.17 | 4031 | -- | -- |
| 177.89 | 0.621 | 6.17 | 0.328 | 2.48 | -1.46 | 2.43 | -- | -0.222 | 6.81 | 20.23 | 4111 | -- | -- |
| 188.55 | 0.64 | 6.14 | 0.563 | 2.44 | -1.53 | -- | 1.13 | -0.196 | 6.89 | 19.66 | 4014 | -- | -- |
| 189.33 | 0.641 | 6.18 | 0.291 | 2.47 | -1.56 | -- | -- | -0.269 | 6.89 | 18.82 | 4057 | -- | -- |
| 435.85 | 0.972 | 6.21 | 0.554 | -- | -2.11 | -- | 1.37 | -0.214 | -- | 24.78 | 2013 | -- | -- |
| 232.89 | 0.715 | 6.25 | -0.458 | 2.43 | -- | 2.22 | -- | -0.589 | 7.1 | -- | -- | -- | -- |
| 245.89 | 0.734 | 6.25 | -0.414 | 2.43 | -- | -- | -- | -0.594 | 7.11 | -- | -- | -- | -- |
| 300.82 | 0.808 | 6.22 | 0.202 | -- | -3.04 | -- | -- | -0.201 | -- | 24.18 | 506 | -- | -- |
| 190.91 | 0.644 | 6.19 | -- | 2.45 | -1.43 | -- | -- | -0.32 | 6.88 | 19.66 | 3986 | -- | -- |
| 558.28 | 1.1 | 6.31 | -0.367 | -- | -- | -- | -- | -0.55 | -- | -- | -- | -- | -- |
| 250.4 | 0.74 | 6.24 | -- | 2.43 | -- | -- | -- | -0.548 | 7.12 | -- | -- | -- | -- |
| 301.34 | 0.809 | 6.25 | -- | -- | -2.96 | -- | -- | -0.282 | -- | 24.3 | 507 | -- | -- |
| 561.84 | 1.11 | 6.3 | -- | -- | -- | -- | -- | -0.51 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 170.45 | temperature | 15 | 270 | > th | dose dependent | rect. | 11 | 22 |
| 5 | 171.67 | temperature | 20 | 1440 | > th | dose dependent | rect. | 7 | 2 |
| 9 | 172.29 | radiation | 30 | 4320 | < th | dose independent | rect. | 15 | 17 |
| 13 | 173.21 | temperature | 10 | 270 | > th | dose dependent | rect. | 23 | 22 |
| 19 | 173.64 | temperature | 20 | 4320 | > th | dose dependent | rect. | 16 | 3 |
| 20 | 173.67 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 2 |
| 25 | 173.82 | radiation | 20 | 4320 | > th | dose dependent | rect. | 15 | 17 |
| 66 | 174.84 | temperature | 10 | 4320 | > th | dose dependent | rect. | 16 | 5 |
| 71 | 174.88 | temperature | 20 | 4320 | > th | dose dependent | rect. | 8 | 14 |
| 72 | 174.90 | temperature | 10 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 108 | 175.14 | temperature | 20 | 4320 | > th | dose dependent | sin | 19 | NA |
| 110 | 175.14 | temperature | 15 | 90 | > th | dose dependent | rect. | 1 | 20 |
| 120 | 175.19 | radiation | 40 | 4320 | < th | dose dependent | rect. | 18 | 9 |
| 133 | 175.25 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 138 | 175.29 | radiation | 10 | 4320 | > th | dose dependent | rect. | 16 | 15 |
| 163 | 175.46 | temperature | 30 | 4320 | < th | dose dependent | rect. | 18 | 3 |
| 328 | 176.20 | radiation | 1 | 4320 | < th | dose independent | rect. | 18 | 11 |
| 382 | 176.42 | temperature | 10 | 4320 | > th | dose dependent | rect. | 8 | 15 |
| 389 | 176.45 | temperature | 10 | 4320 | > th | dose dependent | sin | 19 | NA |
| 399 | 176.47 | radiation | 1 | 4320 | < th | dose independent | rect. | 18 | 9 |
| 425 | 176.54 | temperature | 20 | 4320 | > th | dose dependent | rect. | 13 | 22 |
| 445 | 176.60 | temperature | 20 | 4320 | > th | dose dependent | no | NA | NA |
| 507 | 176.76 | radiation | 1 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 633 | 177.04 | radiation | 1 | 4320 | < th | dose independent | rect. | 18 | 3 |
| 670 | 177.16 | radiation | 1 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 706 | 177.24 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 17 |
| 720 | 177.27 | radiation | 1 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 853 | 177.56 | radiation | 1 | 14400 | < th | dose independent | rect. | 22 | 8 |