Os11g0104900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Clathrin heavy chain, linker domain containing protein.
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Os11g0104900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Clathrin heavy chain, linker domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 33.5 | 0.272 | 10.8 | 1.43 | 0.558 | 0.477 | -0.876 | -0.595 | 0.4 | 5.15 | 92.99 | 560 | -- | -- |
| 34.06 | 0.272 | 10.8 | 1.4 | 0.562 | 0.48 | -0.937 | -- | 0.401 | 5.1 | 92.77 | 599 | -- | -- |
| 35.21 | 0.276 | 10.8 | 1.44 | 0.554 | 0.442 | -- | -0.942 | 0.403 | 5.38 | 92.89 | 510 | -- | -- |
| 36.47 | 0.281 | 10.8 | 1.39 | 0.567 | 0.424 | -- | -- | 0.391 | 5.28 | 93.11 | 624 | -- | -- |
| 45.04 | 0.313 | 10.8 | 1.36 | -- | 0.776 | -- | -0.726 | 0.477 | -- | 90.13 | 350 | -- | -- |
| 36.94 | 0.285 | 10.8 | 1.41 | 0.645 | -- | -0.886 | -- | 0.329 | 5.62 | -- | -- | -- | -- |
| 38.86 | 0.292 | 10.8 | 1.4 | 0.641 | -- | -- | -- | 0.333 | 5.71 | -- | -- | -- | -- |
| 45.7 | 0.315 | 10.8 | 1.34 | -- | 0.672 | -- | -- | 0.451 | -- | 87.85 | 354 | -- | -- |
| 85.14 | 0.43 | 10.8 | -- | 0.618 | 0.573 | -- | -- | 0.286 | 4.75 | 90.17 | 885 | -- | -- |
| 60.15 | 0.362 | 10.8 | 1.42 | -- | -- | -- | -- | 0.348 | -- | -- | -- | -- | -- |
| 90.74 | 0.446 | 10.8 | -- | 0.663 | -- | -- | -- | 0.177 | 5.62 | -- | -- | -- | -- |
| 91.19 | 0.445 | 10.8 | -- | -- | 0.824 | -- | -- | 0.32 | -- | 86.82 | 379 | -- | -- |
| 113.58 | 0.497 | 10.8 | -- | -- | -- | -- | -- | 0.19 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 33.19 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 17 | 16 |
| 2 | 33.19 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 17 | 16 |
| 3 | 33.68 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 21 | 8 |
| 4 | 33.68 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 21 | 8 |
| 5 | 33.78 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 18 | 18 |
| 17 | 33.89 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 4 | 8 |
| 24 | 33.93 | humidity | 80.0 | 720 | > th | dose dependent | rect. | 5 | 1 |
| 45 | 34.02 | humidity | 90.0 | 720 | > th | dose dependent | sin | 7 | NA |
| 49 | 34.03 | temperature | 15.0 | 1440 | > th | dose independent | sin | 20 | NA |
| 64 | 34.08 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 1 | 11 |
| 82 | 34.13 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 4 | 3 |
| 116 | 34.21 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 4 | 22 |
| 128 | 34.24 | temperature | 15.0 | 1440 | > th | dose independent | sin | 2 | NA |
| 129 | 34.24 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 9 | 8 |
| 132 | 34.24 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 9 | 8 |
| 138 | 34.25 | temperature | 15.0 | 720 | < th | dose dependent | rect. | 1 | 22 |
| 141 | 34.26 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 3 | 16 |
| 149 | 34.29 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 3 | 20 |
| 153 | 34.30 | temperature | 15.0 | 720 | < th | dose dependent | sin | 1 | NA |
| 156 | 34.30 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 1 | 22 |
| 169 | 34.34 | humidity | 90.0 | 270 | > th | dose dependent | sin | 0 | NA |
| 170 | 34.34 | humidity | 90.0 | 720 | > th | dose dependent | no | NA | NA |
| 174 | 34.35 | temperature | 15.0 | 720 | < th | dose independent | sin | 19 | NA |
| 175 | 34.35 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 5 | 16 |
| 180 | 34.35 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 5 | 16 |
| 183 | 34.36 | temperature | 15.0 | 720 | < th | dose dependent | sin | 20 | NA |
| 196 | 34.37 | temperature | 15.0 | 720 | < th | dose independent | sin | 1 | NA |
| 203 | 34.38 | humidity | 90.0 | 720 | < th | dose independent | rect. | 7 | 2 |
| 204 | 34.38 | temperature | 15.0 | 720 | < th | dose independent | rect. | 5 | 20 |
| 213 | 34.38 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 227 | 34.41 | temperature | 15.0 | 1440 | < th | dose independent | rect. | 6 | 18 |
| 229 | 34.41 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 5 | 21 |
| 232 | 34.41 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 4 | 1 |
| 250 | 34.43 | temperature | 15.0 | 1440 | < th | dose independent | rect. | 9 | 15 |
| 253 | 34.43 | temperature | 15.0 | 720 | < th | dose independent | rect. | 3 | 18 |
| 254 | 34.43 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 3 | 19 |
| 262 | 34.43 | temperature | 15.0 | 1440 | < th | dose dependent | rect. | 5 | 19 |
| 265 | 34.43 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 8 | 23 |
| 276 | 34.45 | temperature | 15.0 | 270 | > th | dose independent | sin | 9 | NA |
| 277 | 34.45 | temperature | 15.0 | 270 | > th | dose independent | sin | 21 | NA |
| 278 | 34.45 | humidity | 90.0 | 30 | > th | dose independent | rect. | 5 | 7 |
| 286 | 34.45 | temperature | 15.0 | 720 | < th | dose dependent | rect. | 3 | 16 |
| 308 | 34.47 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 5 | 14 |
| 328 | 34.48 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 21 | 16 |
| 331 | 34.48 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 21 | 16 |
| 361 | 34.50 | temperature | 15.0 | 720 | < th | dose dependent | rect. | 5 | 23 |
| 364 | 34.51 | radiation | 1.0 | 720 | < th | dose independent | rect. | 21 | 8 |
| 371 | 34.51 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 11 | 3 |
| 383 | 34.52 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 1 | 18 |
| 392 | 34.52 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 6 | 23 |
| 398 | 34.52 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 21 | 8 |
| 408 | 34.52 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 410 | 34.53 | humidity | 90.0 | 720 | > th | dose independent | rect. | 5 | 2 |
| 411 | 34.53 | temperature | 15.0 | 1440 | < th | dose independent | rect. | 3 | 12 |
| 433 | 34.54 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 5 | 19 |
| 435 | 34.54 | temperature | 15.0 | 720 | < th | dose dependent | no | NA | NA |
| 439 | 34.54 | temperature | 15.0 | 1440 | < th | dose dependent | rect. | 9 | 15 |
| 443 | 34.54 | temperature | 15.0 | 720 | < th | dose dependent | rect. | 17 | 21 |
| 444 | 34.54 | temperature | 15.0 | 720 | < th | dose dependent | rect. | 9 | 22 |
| 445 | 34.54 | temperature | 15.0 | 720 | < th | dose dependent | rect. | 13 | 22 |
| 458 | 34.55 | humidity | 90.0 | 720 | > th | dose independent | rect. | 5 | 5 |
| 459 | 34.55 | humidity | 90.0 | 720 | > th | dose independent | rect. | 5 | 7 |
| 471 | 34.55 | temperature | 15.0 | 720 | < th | dose dependent | rect. | 17 | 19 |
| 509 | 34.57 | humidity | 90.0 | 270 | < th | dose independent | rect. | 1 | 9 |
| 511 | 34.57 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 1 | 21 |
| 524 | 34.57 | temperature | 15.0 | 720 | < th | dose dependent | rect. | 21 | 23 |
| 525 | 34.58 | temperature | 10.0 | 720 | > th | dose independent | rect. | 21 | 8 |
| 526 | 34.58 | temperature | 30.0 | 720 | < th | dose independent | rect. | 21 | 8 |
| 527 | 34.58 | humidity | 50.0 | 720 | > th | dose independent | rect. | 21 | 8 |
| 530 | 34.58 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 21 | 8 |
| 535 | 34.58 | temperature | 10.0 | 720 | > th | dose independent | rect. | 5 | 16 |
| 544 | 34.58 | temperature | 15.0 | 720 | < th | dose dependent | rect. | 9 | 19 |
| 573 | 34.60 | temperature | 15.0 | 1440 | < th | dose independent | rect. | 4 | 8 |
| 590 | 34.61 | temperature | 10.0 | 720 | > th | dose independent | rect. | 9 | 8 |
| 591 | 34.61 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 9 | 8 |
| 593 | 34.61 | temperature | 10.0 | 720 | > th | dose independent | rect. | 17 | 16 |
| 630 | 34.64 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 12 | 1 |
| 648 | 34.65 | temperature | 15.0 | 720 | < th | dose independent | no | NA | NA |
| 650 | 34.65 | temperature | 15.0 | 720 | > th | dose independent | rect. | 19 | 6 |
| 662 | 34.65 | temperature | 15.0 | 720 | < th | dose independent | rect. | 9 | 22 |
| 663 | 34.65 | temperature | 15.0 | 720 | < th | dose independent | rect. | 17 | 22 |
| 666 | 34.65 | temperature | 15.0 | 720 | < th | dose independent | rect. | 12 | 23 |
| 711 | 34.68 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 5 | 7 |
| 717 | 34.68 | temperature | 15.0 | 720 | < th | dose dependent | rect. | 13 | 18 |
| 726 | 34.69 | wind | 9.0 | 720 | < th | dose independent | rect. | 21 | 8 |
| 730 | 34.69 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 15 |
| 749 | 34.70 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 21 | 22 |
| 750 | 34.70 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 6 | 23 |
| 752 | 34.70 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 755 | 34.70 | temperature | 15.0 | 720 | < th | dose dependent | rect. | 17 | 14 |
| 768 | 34.71 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 1 | 8 |
| 774 | 34.71 | temperature | 15.0 | 720 | < th | dose independent | rect. | 21 | 23 |
| 777 | 34.71 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 1 | 8 |
| 830 | 34.73 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 5 | 12 |
| 847 | 34.74 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 1 | 17 |
| 864 | 34.75 | temperature | 15.0 | 90 | > th | dose independent | no | NA | NA |
| 866 | 34.75 | temperature | 15.0 | 90 | < th | dose independent | sin | 7 | NA |
| 915 | 34.75 | temperature | 15.0 | 90 | < th | dose independent | no | NA | NA |
| 917 | 34.75 | temperature | 15.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 919 | 34.75 | temperature | 15.0 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 922 | 34.75 | atmosphere | 1015.0 | 1440 | > th | dose independent | rect. | 1 | 1 |