Os11g0103800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os11g0103800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22.47 | 0.223 | 9.67 | -0.363 | 0.305 | 0.922 | -0.273 | 0.708 | -0.288 | 13.2 | 15.3 | 10 | -- | -- |
| 22.9 | 0.223 | 9.68 | -0.448 | 0.299 | 0.963 | -0.181 | -- | -0.312 | 12.9 | 15.2 | 18 | -- | -- |
| 22.69 | 0.222 | 9.68 | -0.415 | 0.311 | 0.907 | -- | 0.421 | -0.303 | 13.2 | 15.3 | 10 | -- | -- |
| 22.82 | 0.222 | 9.69 | -0.47 | 0.311 | 0.921 | -- | -- | -0.316 | 13.2 | 15.3 | 10 | -- | -- |
| 26.82 | 0.241 | 9.69 | -0.485 | -- | 1.31 | -- | 0.467 | -0.352 | -- | 11.58 | 10 | -- | -- |
| 31.52 | 0.263 | 9.66 | -0.286 | 0.577 | -- | 0.0386 | -- | -0.181 | 13.8 | -- | -- | -- | -- |
| 31.53 | 0.263 | 9.66 | -0.285 | 0.577 | -- | -- | -- | -0.18 | 13.8 | -- | -- | -- | -- |
| 27 | 0.242 | 9.7 | -0.549 | -- | 1.32 | -- | -- | -0.37 | -- | 11.5 | 10 | -- | -- |
| 28.07 | 0.247 | 9.67 | -- | 0.372 | 0.66 | -- | -- | -0.233 | 13.4 | 16.9 | 10 | -- | -- |
| 51.78 | 0.336 | 9.66 | -0.308 | -- | -- | -- | -- | -0.193 | -- | -- | -- | -- | -- |
| 33.67 | 0.271 | 9.65 | -- | 0.583 | -- | -- | -- | -0.149 | 13.8 | -- | -- | -- | -- |
| 33.76 | 0.271 | 9.68 | -- | -- | 0.934 | -- | -- | -0.288 | -- | 20.06 | 6 | -- | -- |
| 54.29 | 0.344 | 9.65 | -- | -- | -- | -- | -- | -0.159 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 21.47 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 2 | 21.56 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 14 | 22.24 | temperature | 25 | 10 | < th | dose dependent | rect. | 24 | 22 |
| 25 | 22.48 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 33 | 22.53 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 38 | 22.61 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 42 | 22.67 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 22 |
| 43 | 22.67 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 45 | 22.74 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 46 | 22.75 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 54 | 22.80 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 55 | 22.83 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 59 | 22.86 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 78 | 22.99 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 86 | 23.02 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 92 | 23.05 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 121 | 23.18 | temperature | 20 | 10 | > th | dose dependent | rect. | 2 | 23 |
| 129 | 23.23 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 143 | 23.28 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 171 | 23.39 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 234 | 23.64 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 247 | 23.68 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 21 |
| 252 | 23.70 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 19 |
| 258 | 23.72 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 21 |
| 303 | 23.85 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 325 | 23.92 | temperature | 10 | 10 | > th | dose dependent | sin | 6 | NA |
| 387 | 24.08 | temperature | 30 | 10 | < th | dose dependent | sin | 6 | NA |
| 428 | 24.14 | temperature | 25 | 90 | < th | dose independent | rect. | 24 | 23 |
| 441 | 24.16 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 519 | 24.31 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 12 |
| 531 | 24.33 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 632 | 24.45 | temperature | 20 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 694 | 24.53 | temperature | 25 | 90 | > th | dose independent | rect. | 21 | 23 |
| 716 | 24.55 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 20 |
| 799 | 24.64 | temperature | 25 | 1440 | < th | dose independent | rect. | 11 | 19 |
| 800 | 24.64 | temperature | 30 | 10 | < th | dose dependent | rect. | 16 | 16 |
| 850 | 24.68 | temperature | 25 | 4320 | < th | dose independent | rect. | 20 | 8 |
| 871 | 24.69 | temperature | 25 | 1440 | < th | dose dependent | rect. | 10 | 19 |
| 901 | 24.71 | temperature | 25 | 1440 | > th | dose independent | rect. | 11 | 19 |
| 926 | 24.72 | temperature | 25 | 1440 | > th | dose independent | rect. | 11 | 17 |
| 962 | 24.74 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 2 |