Os11g0103700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Mitochondrial substrate carrier family protein.
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Os11g0103700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Mitochondrial substrate carrier family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29.21 | 0.254 | 11.6 | 1.16 | 0.805 | -0.927 | 0.155 | 3.67 | 0.279 | 6.83 | 20.11 | 1718 | -- | -- |
| 38.01 | 0.287 | 11.7 | 0.512 | 0.907 | -1.14 | -0.28 | -- | 0.187 | 6.75 | 14.49 | 8903 | -- | -- |
| 29.27 | 0.252 | 11.6 | 1.16 | 0.8 | -0.931 | -- | 3.68 | 0.279 | 6.82 | 20.12 | 1740 | -- | -- |
| 37.1 | 0.284 | 11.7 | 0.443 | 0.896 | -1.11 | -- | -- | 0.166 | 6.76 | 12.53 | 8721 | -- | -- |
| 57.41 | 0.353 | 11.6 | 1.77 | -- | -1.4 | -- | 6.74 | 0.359 | -- | 24.55 | 1960 | -- | -- |
| 56.11 | 0.351 | 11.8 | -0.17 | 0.862 | -- | 0.0601 | -- | -0.186 | 6.85 | -- | -- | -- | -- |
| 56.12 | 0.351 | 11.8 | -0.169 | 0.863 | -- | -- | -- | -0.186 | 6.85 | -- | -- | -- | -- |
| 74.73 | 0.403 | 11.8 | 0.424 | -- | -1.11 | -- | -- | 0.143 | -- | 11.3 | 7835 | -- | -- |
| 39.93 | 0.294 | 11.8 | -- | 0.877 | -0.843 | -- | -- | 0.0295 | 6.66 | 11 | 8378 | -- | -- |
| 95.09 | 0.456 | 11.8 | -0.15 | -- | -- | -- | -- | -0.17 | -- | -- | -- | -- | -- |
| 56.87 | 0.353 | 11.8 | -- | 0.861 | -- | -- | -- | -0.167 | 6.86 | -- | -- | -- | -- |
| 72.69 | 0.397 | 11.8 | -- | -- | -1.06 | -- | -- | 0.00805 | -- | 10.02 | 1998 | -- | -- |
| 95.68 | 0.457 | 11.8 | -- | -- | -- | -- | -- | -0.153 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.24 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 2 | 27.25 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 13 | 27.89 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 6 |
| 28 | 28.12 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 30 | 28.13 | wind | 1 | 43200 | < th | dose dependent | rect. | 24 | 2 |
| 36 | 28.29 | wind | 3 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 39 | 28.33 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 41 | 28.40 | wind | 3 | 43200 | < th | dose dependent | rect. | 8 | 4 |
| 42 | 28.42 | humidity | 80 | 43200 | < th | dose dependent | rect. | 21 | 2 |
| 50 | 28.53 | humidity | 80 | 43200 | < th | dose dependent | rect. | 20 | 4 |
| 51 | 28.54 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 53 | 28.55 | humidity | 90 | 14400 | > th | dose dependent | rect. | 14 | 16 |
| 79 | 28.74 | temperature | 20 | 1440 | > th | dose dependent | sin | 14 | NA |
| 82 | 28.77 | humidity | 80 | 43200 | < th | dose independent | rect. | 20 | 4 |
| 83 | 28.77 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 17 |
| 85 | 28.81 | humidity | 80 | 43200 | < th | dose independent | rect. | 20 | 9 |
| 108 | 28.88 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 110 | 28.88 | humidity | 90 | 14400 | > th | dose dependent | sin | 13 | NA |
| 117 | 28.91 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 148 | 29.05 | humidity | 90 | 14400 | > th | dose dependent | rect. | 20 | 7 |
| 149 | 29.06 | humidity | 80 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 181 | 29.20 | humidity | 80 | 43200 | < th | dose dependent | rect. | 20 | 13 |
| 186 | 29.24 | humidity | 80 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 188 | 29.25 | wind | 3 | 43200 | > th | dose independent | rect. | 8 | 7 |
| 205 | 29.31 | humidity | 80 | 43200 | > th | dose independent | rect. | 20 | 9 |
| 210 | 29.33 | wind | 5 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 212 | 29.34 | wind | 3 | 43200 | < th | dose independent | rect. | 8 | 7 |
| 213 | 29.34 | wind | 1 | 43200 | > th | dose dependent | rect. | 9 | 8 |
| 226 | 29.38 | humidity | 80 | 43200 | > th | dose independent | rect. | 20 | 4 |
| 239 | 29.44 | wind | 9 | 43200 | < th | dose dependent | rect. | 8 | 9 |
| 271 | 29.54 | wind | 5 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 283 | 29.57 | wind | 1 | 43200 | < th | dose independent | rect. | 24 | 2 |
| 315 | 29.63 | wind | 3 | 43200 | < th | dose independent | rect. | 9 | 5 |
| 349 | 29.71 | wind | 3 | 43200 | > th | dose independent | rect. | 11 | 3 |
| 406 | 29.81 | humidity | 80 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 443 | 29.87 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 444 | 29.87 | wind | 5 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 463 | 29.89 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 23 |
| 474 | 29.90 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 23 |
| 482 | 29.92 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 6 |
| 511 | 29.95 | humidity | 80 | 43200 | < th | dose independent | rect. | 3 | 2 |
| 548 | 29.99 | wind | 1 | 43200 | > th | dose dependent | sin | 22 | NA |
| 549 | 29.99 | wind | 1 | 43200 | > th | dose dependent | rect. | 8 | 13 |
| 566 | 30.00 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 593 | 30.04 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 636 | 30.08 | wind | 9 | 43200 | < th | dose dependent | sin | 22 | NA |
| 642 | 30.08 | wind | 9 | 43200 | < th | dose dependent | rect. | 8 | 13 |
| 652 | 30.09 | humidity | 80 | 43200 | < th | dose independent | rect. | 23 | 6 |
| 657 | 30.09 | wind | 1 | 43200 | > th | dose dependent | rect. | 6 | 15 |
| 670 | 30.11 | radiation | 30 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 763 | 30.18 | wind | 9 | 43200 | < th | dose dependent | rect. | 6 | 15 |
| 771 | 30.19 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 807 | 30.23 | wind | 3 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 855 | 30.26 | humidity | 90 | 14400 | > th | dose independent | rect. | 18 | 10 |
| 912 | 30.31 | humidity | 80 | 43200 | < th | dose independent | rect. | 23 | 2 |
| 938 | 30.33 | wind | 1 | 43200 | > th | dose independent | rect. | 24 | 2 |
| 941 | 30.33 | wind | 5 | 43200 | < th | dose independent | rect. | 12 | 5 |
| 967 | 30.35 | radiation | 1 | 43200 | < th | dose dependent | rect. | 21 | 8 |
| 974 | 30.36 | radiation | 40 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 978 | 30.36 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |