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Os10g0580300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein kinase-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.4 (0.0154) R2 : 0.159
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.302 (0.0325) R2dN8 : 0.206 R2N8 : 0.159
σ : 0.29
deviance : 38.7
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
20.45 0.212 12.4 -0.413 0.463 -0.806 0.834 -0.846 0.198 2.21 22.05 25 -- --
21.05 0.215 12.5 -0.482 0.452 -0.624 0.618 -- 0.184 2.21 22.4 31 -- --
22.46 0.222 12.5 -0.489 0.455 -0.674 -- -0.153 0.184 2.23 22.13 18 -- --
22.45 0.222 12.5 -0.501 0.454 -0.639 -- -- 0.18 2.22 22.32 9 -- --
33.42 0.271 12.5 -0.45 -- -0.402 -- 0.212 0.225 -- 20.8 71 -- --
25.4 0.236 12.4 -0.365 0.372 -- 0.647 -- 0.256 2.44 -- -- -- --
26.91 0.243 12.4 -0.383 0.374 -- -- -- 0.252 2.52 -- -- -- --
33.45 0.271 12.4 -0.441 -- -0.462 -- -- 0.227 -- 20.7 79 -- --
28.56 0.25 12.4 -- 0.419 -0.432 -- -- 0.255 2.28 22.32 9 -- --
35.15 0.277 12.4 -0.367 -- -- -- -- 0.261 -- -- -- -- --
30.77 0.259 12.4 -- 0.367 -- -- -- 0.294 2.5 -- -- -- --
38.15 0.289 12.4 -- -- -0.238 -- -- 0.287 -- 21.1 10 -- --
38.7 0.29 12.4 -- -- -- -- -- 0.302 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 20.79 temperature 25.0 270 < th dose dependent rect. 16 13
16 20.97 temperature 20.0 10 < th dose independent rect. 18 12
22 20.98 temperature 20.0 10 < th dose independent rect. 16 14
23 20.98 temperature 25.0 90 < th dose dependent sin 12 NA
44 21.02 temperature 20.0 10 > th dose independent rect. 7 23
48 21.04 temperature 20.0 10 > th dose independent sin 10 NA
59 21.08 temperature 20.0 10 < th dose independent sin 11 NA
94 21.12 temperature 20.0 10 < th dose independent rect. 12 18
137 21.14 humidity 80.0 14400 > th dose dependent rect. 13 1
180 21.17 temperature 20.0 10 > th dose independent rect. 18 12
222 21.19 temperature 25.0 720 < th dose dependent rect. 17 4
270 21.22 temperature 20.0 90 > th dose independent rect. 17 22
292 21.24 temperature 20.0 90 < th dose independent rect. 12 18
345 21.28 humidity 90.0 14400 > th dose independent rect. 13 1
354 21.29 precipitation 0.1 14400 < th dose independent rect. 14 2
358 21.29 temperature 20.0 10 > th dose independent rect. 18 21
361 21.29 precipitation 0.1 14400 < th dose dependent rect. 14 2
388 21.33 temperature 20.0 10 > th dose independent no NA NA
400 21.34 precipitation 0.1 14400 > th dose independent rect. 14 2
403 21.34 precipitation 0.1 14400 > th dose dependent rect. 14 2
441 21.37 temperature 25.0 720 < th dose dependent rect. 19 1
442 21.37 humidity 90.0 4320 > th dose dependent rect. 7 2
449 21.38 temperature 20.0 10 < th dose independent no NA NA
452 21.38 temperature 20.0 10 < th dose independent rect. 17 23
453 21.38 temperature 20.0 10 < th dose independent rect. 19 23
454 21.38 temperature 20.0 10 < th dose independent rect. 23 23
468 21.39 temperature 20.0 10 < th dose independent rect. 21 23
505 21.41 temperature 20.0 10 < th dose independent rect. 1 23
506 21.41 temperature 20.0 10 < th dose independent rect. 3 23
507 21.41 temperature 20.0 10 < th dose independent rect. 5 23
535 21.43 precipitation 0.1 14400 > th dose independent rect. 9 7
565 21.45 precipitation 0.1 14400 > th dose dependent rect. 5 11
569 21.46 precipitation 0.1 14400 < th dose independent rect. 9 7
574 21.46 temperature 20.0 10 > th dose independent rect. 17 23
576 21.46 precipitation 0.1 14400 < th dose dependent rect. 9 7
602 21.49 precipitation 0.1 14400 > th dose independent rect. 5 11
614 21.50 precipitation 0.1 14400 < th dose independent rect. 5 11
625 21.50 precipitation 0.1 14400 < th dose dependent rect. 5 11
647 21.52 temperature 20.0 10 > th dose independent rect. 3 23
662 21.53 temperature 15.0 270 > th dose dependent rect. 18 11
664 21.54 precipitation 0.1 14400 > th dose independent rect. 7 9
694 21.56 precipitation 0.1 14400 < th dose independent rect. 7 9
696 21.56 temperature 20.0 270 > th dose independent rect. 17 11
708 21.56 precipitation 0.1 14400 < th dose dependent rect. 7 9
819 21.61 temperature 20.0 90 < th dose dependent rect. 23 7
829 21.62 humidity 90.0 14400 < th dose independent rect. 13 1
870 21.63 temperature 20.0 10 > th dose independent rect. 9 23
894 21.64 temperature 20.0 30 < th dose dependent no NA NA
910 21.64 temperature 20.0 30 < th dose dependent rect. 5 23
915 21.64 temperature 20.0 30 < th dose dependent rect. 17 23
916 21.64 temperature 20.0 30 < th dose dependent rect. 19 23
917 21.64 temperature 20.0 30 < th dose dependent rect. 23 23
918 21.65 precipitation 0.1 14400 > th dose independent rect. 17 1
942 21.65 temperature 20.0 30 < th dose dependent rect. 3 23
944 21.65 temperature 20.0 30 < th dose dependent rect. 21 23
946 21.66 humidity 90.0 14400 > th dose independent rect. 7 1
975 21.66 temperature 20.0 30 < th dose dependent rect. 1 23