Os10g0579200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Sugar transporter family protein.
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Os10g0579200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Sugar transporter family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 54.23 | 0.346 | 11.2 | -0.0466 | 0.813 | -1.3 | -0.426 | -0.512 | -0.206 | 11.4 | 20.7 | 1346 | -- | -- |
| 54.4 | 0.344 | 11.2 | 0.0314 | 0.813 | -1.21 | -0.331 | -- | -0.185 | 11.3 | 20.9 | 1323 | -- | -- |
| 54.69 | 0.344 | 11.2 | -0.0232 | 0.818 | -1.29 | -- | -0.393 | -0.184 | 11.4 | 20.9 | 1359 | -- | -- |
| 54.68 | 0.344 | 11.1 | 0.0221 | 0.815 | -1.18 | -- | -- | -0.171 | 11.3 | 21.1 | 1334 | -- | -- |
| 84.35 | 0.428 | 11.2 | -0.0376 | -- | -1.25 | -- | -0.0796 | -0.157 | -- | 21.4 | 896 | -- | -- |
| 91.31 | 0.448 | 11.2 | -0.461 | 0.864 | -- | -0.445 | -- | -0.482 | 11.6 | -- | -- | -- | -- |
| 92.15 | 0.45 | 11.2 | -0.479 | 0.867 | -- | -- | -- | -0.484 | 11.5 | -- | -- | -- | -- |
| 84.38 | 0.428 | 11.2 | -0.0276 | -- | -1.26 | -- | -- | -0.147 | -- | 21.35 | 890 | -- | -- |
| 54.65 | 0.344 | 11.1 | -- | 0.798 | -1.17 | -- | -- | -0.171 | 11.3 | 21.16 | 1254 | -- | -- |
| 139.3 | 0.552 | 11.2 | -0.503 | -- | -- | -- | -- | -0.493 | -- | -- | -- | -- | -- |
| 98.2 | 0.464 | 11.2 | -- | 0.872 | -- | -- | -- | -0.43 | 11.5 | -- | -- | -- | -- |
| 84.4 | 0.428 | 11.2 | -- | -- | -1.26 | -- | -- | -0.142 | -- | 21.35 | 891 | -- | -- |
| 145.97 | 0.564 | 11.2 | -- | -- | -- | -- | -- | -0.437 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 53.90 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 8 |
| 2 | 53.95 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 11 |
| 11 | 54.19 | temperature | 20 | 1440 | > th | dose independent | sin | 10 | NA |
| 14 | 54.22 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 11 |
| 31 | 54.39 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 8 |
| 45 | 54.52 | temperature | 20 | 1440 | < th | dose independent | sin | 10 | NA |
| 228 | 55.76 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 234 | 55.78 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 3 |
| 264 | 55.89 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 342 | 56.29 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 383 | 56.53 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 434 | 56.84 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 23 |
| 440 | 56.86 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 23 |
| 446 | 56.91 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 23 |
| 451 | 56.95 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 465 | 57.05 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 23 |
| 468 | 57.09 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 475 | 57.13 | temperature | 25 | 720 | < th | dose dependent | rect. | 2 | 22 |
| 477 | 57.15 | temperature | 20 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 490 | 57.24 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 494 | 57.28 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 9 |
| 506 | 57.33 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 23 |
| 508 | 57.37 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 23 |
| 520 | 57.40 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 15 |
| 535 | 57.47 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 583 | 57.68 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 588 | 57.70 | temperature | 25 | 720 | < th | dose dependent | rect. | 16 | 22 |
| 609 | 57.76 | temperature | 25 | 1440 | < th | dose dependent | sin | 10 | NA |
| 637 | 57.84 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 6 |
| 640 | 57.85 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 646 | 57.86 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 676 | 57.95 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 686 | 57.98 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 687 | 57.98 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 765 | 58.16 | temperature | 25 | 720 | < th | dose dependent | rect. | 8 | 23 |