Os10g0578700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0578700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 178.79 | 0.628 | 8.09 | 0.47 | 3.21 | -2.52 | 0.173 | 1.66 | -0.482 | 9.64 | 18.72 | 686 | 23 | 10.2 |
| 180.37 | 0.625 | 8.09 | 0.251 | 3.37 | -2.56 | 0.609 | -- | -0.523 | 9.49 | 18.54 | 604 | 23.1 | 10.6 |
| 178.77 | 0.623 | 8.09 | 0.498 | 3.23 | -2.58 | -- | 1.87 | -0.484 | 9.63 | 18.7 | 668 | 23 | 10.4 |
| 180.44 | 0.626 | 8.11 | 0.242 | 3.21 | -2.39 | -- | -- | -0.55 | 9.87 | 18.59 | 599 | 23 | 11.7 |
| 278.97 | 0.778 | 8.42 | 0.995 | -- | -3.11 | -- | 1.68 | -0.735 | -- | -4.925 | 1119 | 5.49 | 11.9 |
| 264.81 | 0.763 | 8.24 | -0.242 | 2.09 | -- | 0.165 | -- | -0.982 | 9.56 | -- | -- | -- | -- |
| 264.91 | 0.762 | 8.24 | -0.236 | 2.09 | -- | -- | -- | -0.981 | 9.56 | -- | -- | -- | -- |
| 247.36 | 0.733 | 8.25 | 0.331 | -- | -2.96 | -- | -- | -0.684 | -- | -6.352 | 1168 | 6.03 | 10.5 |
| 181.76 | 0.628 | 8.12 | -- | 3.19 | -2.33 | -- | -- | -0.579 | 9.84 | 18.73 | 599 | 23 | 11.6 |
| 521.87 | 1.07 | 8.3 | -0.252 | -- | -- | -- | -- | -0.976 | -- | -- | -- | -- | -- |
| 266.37 | 0.763 | 8.24 | -- | 2.09 | -- | -- | -- | -0.955 | 9.57 | -- | -- | -- | -- |
| 246.37 | 0.731 | 8.29 | -- | -- | -2.76 | -- | -- | -0.782 | -- | -6.396 | 1096 | 6.24 | 11.5 |
| 523.54 | 1.07 | 8.29 | -- | -- | -- | -- | -- | -0.949 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 181.96 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 2 | 182.60 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 21 | 187.25 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 6 |
| 22 | 187.46 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 8 |
| 72 | 192.06 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 12 |
| 114 | 194.36 | temperature | 25 | 720 | < th | dose dependent | sin | 8 | NA |
| 128 | 194.88 | temperature | 20 | 720 | < th | dose independent | rect. | 24 | 7 |
| 160 | 196.11 | temperature | 15 | 720 | > th | dose dependent | sin | 8 | NA |
| 211 | 197.69 | temperature | 20 | 270 | > th | dose dependent | rect. | 23 | 17 |
| 274 | 199.43 | temperature | 20 | 720 | > th | dose independent | sin | 9 | NA |
| 307 | 200.04 | temperature | 15 | 270 | > th | dose dependent | sin | 4 | NA |
| 329 | 200.53 | temperature | 20 | 720 | < th | dose independent | sin | 8 | NA |
| 366 | 201.18 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 20 |
| 467 | 203.04 | temperature | 20 | 720 | > th | dose independent | rect. | 15 | 18 |
| 537 | 204.15 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 21 |
| 691 | 206.08 | temperature | 20 | 720 | < th | dose independent | rect. | 5 | 1 |
| 985 | 209.57 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 999 | 209.71 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |