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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os10g0578100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.11 (0.0174) R2 : 0.00112
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0262 (0.0366) R2dN8 : 0.00145 R2N8 : 0.00112
σ : 0.327
deviance : 49.17
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
47.5 0.324 3.11 0.101 0.158 -0.184 -0.474 0.166 0.0355 1.25 20 8 -- --
47.54 0.321 3.11 0.1 0.152 -0.175 -0.318 -- 0.0351 1.56 20 7 -- --
47.76 0.322 3.11 0.104 0.154 -0.174 -- -0.184 0.0358 1.61 20.11 7 -- --
47.94 0.322 3.11 0.11 0.153 -0.176 -- -- 0.0373 1.63 20.56 7 -- --
48.22 0.323 3.11 0.102 -- -0.0685 -- -0.19 0.0371 -- 20.61 7 -- --
48.25 0.326 3.11 0.104 0.0601 -- 0.298 -- 0.0384 10.6 -- -- -- --
48.5 0.326 3.11 0.115 0.0767 -- -- -- 0.038 8.12 -- -- -- --
48.42 0.324 3.11 0.115 -- -0.0698 -- -- 0.0406 -- 20.91 6 -- --
48.26 0.324 3.12 -- 0.157 -0.179 -- -- 0.0251 1.65 20.91 7 -- --
48.82 0.326 3.11 0.115 -- -- -- -- 0.039 -- -- -- -- --
48.85 0.327 3.11 -- 0.0774 -- -- -- 0.0253 8.01 -- -- -- --
48.77 0.325 3.11 -- -- -0.0703 -- -- 0.0267 -- 21.04 6 -- --
49.17 0.327 3.11 -- -- -- -- -- 0.0262 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 43.90 radiation 30.0 4320 < th dose dependent rect. 23 1
3 43.92 wind 9.0 1440 < th dose independent rect. 23 1
4 43.92 temperature 10.0 1440 > th dose independent rect. 23 1
7 43.92 temperature 30.0 1440 < th dose independent rect. 23 1
11 43.92 humidity 50.0 1440 > th dose independent rect. 23 1
21 43.92 atmosphere 995.0 1440 > th dose independent rect. 23 1
22 43.92 radiation 1.0 1440 < th dose independent rect. 23 1
42 43.92 temperature 10.0 1440 > th dose independent rect. 24 23
45 43.92 radiation 1.0 1440 < th dose dependent rect. 23 1
51 43.93 temperature 25.0 30 > th dose independent rect. 22 1
52 43.98 wind 3.0 30 < th dose independent rect. 22 1
53 43.98 temperature 20.0 30 > th dose dependent rect. 22 1
54 44.00 humidity 80.0 30 > th dose independent rect. 22 1
55 44.00 atmosphere 1005.0 30 > th dose dependent rect. 22 1
60 44.06 humidity 90.0 30 < th dose independent rect. 22 1
63 44.07 wind 5.0 30 < th dose dependent rect. 22 1
68 44.11 atmosphere 1005.0 30 > th dose independent rect. 22 1
71 44.12 precipitation 0.1 30 < th dose independent rect. 22 1
72 44.12 precipitation 0.1 30 < th dose dependent rect. 22 1
73 44.14 wind 1.0 30 > th dose independent rect. 22 1
76 44.14 temperature 10.0 30 > th dose independent rect. 22 1
78 44.14 temperature 30.0 30 < th dose independent rect. 22 1
79 44.14 humidity 50.0 30 > th dose independent rect. 22 1
83 44.14 atmosphere 1010.0 30 < th dose independent rect. 22 1
85 44.14 radiation 1.0 30 < th dose independent rect. 22 1
90 44.14 temperature 10.0 30 > th dose independent rect. 23 23
91 44.14 humidity 50.0 30 > th dose dependent rect. 22 1
93 44.14 radiation 1.0 30 < th dose dependent rect. 22 1
99 44.20 radiation 40.0 43200 < th dose dependent rect. 23 1
103 44.31 atmosphere 1015.0 30 < th dose dependent rect. 22 1
105 44.38 humidity 90.0 30 < th dose dependent rect. 22 1
107 44.44 wind 1.0 30 > th dose dependent rect. 22 1
112 44.55 temperature 30.0 30 < th dose dependent rect. 22 1
155 45.13 wind 9.0 30 < th dose independent rect. 23 23
160 45.55 atmosphere 1005.0 90 > th dose dependent rect. 2 1
163 45.61 atmosphere 1000.0 30 > th dose independent rect. 3 23
164 45.65 atmosphere 1005.0 10 > th dose dependent rect. 2 2
170 45.74 radiation 1.0 43200 < th dose dependent rect. 3 1
174 45.75 radiation 1.0 4320 < th dose dependent rect. 3 1
180 45.78 wind 9.0 1440 < th dose independent rect. 3 1
181 45.78 temperature 10.0 1440 > th dose independent rect. 3 1
184 45.78 temperature 30.0 1440 < th dose independent rect. 3 1
188 45.78 humidity 50.0 1440 > th dose independent rect. 3 1
197 45.78 atmosphere 995.0 1440 > th dose independent rect. 3 1
198 45.78 radiation 1.0 1440 < th dose independent rect. 3 1
218 45.78 temperature 10.0 1440 > th dose independent rect. 4 23
234 45.79 temperature 25.0 90 > th dose independent rect. 1 1
239 45.81 temperature 25.0 90 > th dose dependent rect. 1 2
241 45.82 wind 1.0 30 < th dose independent rect. 2 1
242 45.82 wind 3.0 30 < th dose dependent rect. 2 1
246 45.84 atmosphere 1005.0 30 > th dose independent rect. 2 1
250 45.84 wind 3.0 10 < th dose dependent rect. 22 5
265 45.87 temperature 10.0 30 > th dose independent rect. 2 1
267 45.87 temperature 30.0 30 < th dose independent rect. 2 1
268 45.87 humidity 50.0 30 > th dose independent rect. 2 1
271 45.87 humidity 90.0 30 > th dose independent rect. 2 1
273 45.87 atmosphere 1010.0 30 < th dose independent rect. 2 1
275 45.87 radiation 1.0 30 < th dose independent rect. 2 1
280 45.87 precipitation 0.1 30 < th dose independent rect. 2 1
281 45.87 temperature 10.0 30 > th dose independent rect. 3 23
282 45.87 humidity 50.0 30 > th dose dependent rect. 2 1
284 45.87 radiation 1.0 30 < th dose dependent rect. 2 1
289 45.87 precipitation 0.1 30 < th dose dependent rect. 2 1
292 45.88 precipitation 0.1 30 < th dose independent rect. 23 23
296 45.88 precipitation 0.1 30 < th dose dependent rect. 23 23
298 45.90 temperature 25.0 270 > th dose independent rect. 19 8
305 45.92 atmosphere 1015.0 30 < th dose dependent rect. 2 1
307 45.92 temperature 20.0 30 > th dose dependent rect. 22 5
309 45.93 temperature 30.0 30 < th dose dependent rect. 2 1
310 45.94 wind 1.0 10 < th dose independent rect. 23 4
311 45.94 atmosphere 1000.0 30 > th dose independent rect. 23 23
322 45.98 precipitation 0.1 30 < th dose independent rect. 3 23
325 45.98 wind 5.0 10 < th dose dependent rect. 20 7
326 45.98 precipitation 0.1 30 < th dose dependent rect. 3 23
328 45.99 temperature 25.0 270 > th dose independent rect. 19 11
332 45.99 temperature 25.0 270 > th dose dependent rect. 19 11
333 46.00 wind 1.0 30 > th dose independent rect. 2 1
336 46.00 temperature 25.0 270 > th dose dependent rect. 19 8
339 46.01 radiation 10.0 30 < th dose independent rect. 11 1
353 46.04 wind 1.0 10 < th dose independent rect. 17 10
394 46.05 temperature 20.0 30 > th dose dependent rect. 20 7
402 46.09 wind 9.0 30 < th dose independent rect. 3 23
407 46.10 radiation 10.0 10 < th dose dependent rect. 12 1
488 46.25 radiation 20.0 10 < th dose dependent rect. 3 23
489 46.26 temperature 20.0 30 > th dose independent rect. 22 5
505 46.29 wind 5.0 10 < th dose dependent rect. 16 11
537 46.36 humidity 50.0 30 > th dose independent rect. 3 23
563 46.39 wind 5.0 90 < th dose independent rect. 19 8
575 46.40 atmosphere 1000.0 720 > th dose independent rect. 3 8
608 46.44 wind 9.0 720 < th dose independent rect. 3 8
621 46.44 wind 7.0 90 < th dose dependent rect. 16 11
623 46.45 humidity 90.0 90 < th dose independent rect. 2 1
624 46.45 atmosphere 995.0 720 > th dose independent rect. 23 16
649 46.48 temperature 10.0 720 > th dose independent rect. 3 8
650 46.48 humidity 50.0 720 > th dose independent rect. 3 8
655 46.48 temperature 10.0 720 > th dose independent rect. 11 16
656 46.48 atmosphere 995.0 720 > th dose independent rect. 11 16
665 46.49 atmosphere 1010.0 90 < th dose independent rect. 3 17
666 46.49 radiation 10.0 10 < th dose independent rect. 3 23
682 46.51 atmosphere 1010.0 30 < th dose independent rect. 22 5
683 46.51 precipitation 0.1 720 < th dose independent rect. 15 8
684 46.51 humidity 50.0 90 > th dose independent rect. 3 16
691 46.51 precipitation 0.1 720 < th dose dependent rect. 15 8
698 46.52 precipitation 0.1 720 < th dose independent rect. 11 16
712 46.52 precipitation 0.1 720 < th dose dependent rect. 11 16
713 46.53 temperature 25.0 270 > th dose independent sin 11 NA
715 46.53 wind 9.0 720 < th dose independent rect. 15 8
724 46.54 wind 3.0 270 < th dose independent rect. 22 1
729 46.54 atmosphere 995.0 720 > th dose independent rect. 15 8
741 46.55 atmosphere 1010.0 90 < th dose independent rect. 20 7
743 46.55 temperature 10.0 720 > th dose independent rect. 15 8
746 46.55 temperature 10.0 720 > th dose independent rect. 23 16
747 46.55 atmosphere 995.0 90 > th dose independent rect. 3 16
761 46.56 precipitation 0.1 720 < th dose independent rect. 3 8
769 46.56 precipitation 0.1 720 < th dose dependent rect. 3 8
785 46.58 atmosphere 1015.0 720 < th dose independent rect. 3 8
787 46.58 radiation 40.0 30 < th dose independent rect. 11 16
807 46.60 temperature 30.0 30 < th dose independent rect. 3 23
865 46.63 radiation 30.0 30 < th dose independent rect. 3 8
881 46.64 radiation 40.0 90 < th dose dependent rect. 3 7
894 46.65 radiation 40.0 30 < th dose dependent rect. 11 16
902 46.67 atmosphere 1005.0 90 > th dose independent rect. 20 7
913 46.68 humidity 50.0 720 > th dose independent rect. 23 16
929 46.69 temperature 30.0 30 < th dose independent rect. 23 23
936 46.69 humidity 50.0 30 > th dose dependent rect. 3 8
949 46.70 radiation 10.0 10 < th dose independent rect. 10 16
958 46.70 humidity 50.0 90 > th dose dependent rect. 3 16
965 46.71 atmosphere 1005.0 10 > th dose independent rect. 22 6
966 46.71 temperature 30.0 10 < th dose independent rect. 13 7
972 46.71 temperature 15.0 90 > th dose independent rect. 3 16
990 46.72 humidity 70.0 10 > th dose independent rect. 3 7
997 46.72 humidity 50.0 30 > th dose independent rect. 23 23