Os10g0577900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Glycerol-3-phosphate acyltransferase (Fragment).
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Os10g0577900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Glycerol-3-phosphate acyltransferase (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 57.38 | 0.356 | 11.8 | -0.419 | 0.894 | -0.527 | -0.198 | -0.398 | -0.0207 | 20.8 | 24.9 | 240 | -- | -- |
| 57.48 | 0.353 | 11.8 | -0.538 | 0.872 | -0.566 | -0.142 | -- | -0.0502 | 21 | 25.16 | 225 | -- | -- |
| 57.44 | 0.353 | 11.8 | -0.406 | 0.905 | -0.517 | -- | -0.388 | -0.016 | 20.7 | 24.9 | 221 | -- | -- |
| 57.55 | 0.353 | 11.8 | -0.536 | 0.874 | -0.563 | -- | -- | -0.05 | 20.9 | 25.13 | 223 | -- | -- |
| 94.13 | 0.452 | 11.8 | -0.56 | -- | -0.724 | -- | 0.22 | -0.101 | -- | 25.3 | 349 | -- | -- |
| 73.17 | 0.401 | 11.8 | -0.368 | 1.12 | -- | 0.0619 | -- | 0.209 | 19.6 | -- | -- | -- | -- |
| 73.19 | 0.401 | 11.8 | -0.37 | 1.12 | -- | -- | -- | 0.209 | 19.6 | -- | -- | -- | -- |
| 92.65 | 0.448 | 11.8 | -0.61 | -- | -0.842 | -- | -- | -0.168 | -- | 25.2 | 348 | -- | -- |
| 64.67 | 0.375 | 11.8 | -- | 0.917 | -0.479 | -- | -- | 0.0456 | 20.7 | 25.12 | 200 | -- | -- |
| 140.75 | 0.554 | 11.7 | -0.385 | -- | -- | -- | -- | 0.192 | -- | -- | -- | -- | -- |
| 76.79 | 0.41 | 11.8 | -- | 1.12 | -- | -- | -- | 0.25 | 19.6 | -- | -- | -- | -- |
| 102.26 | 0.471 | 11.8 | -- | -- | -0.776 | -- | -- | -0.0782 | -- | 25.3 | 340 | -- | -- |
| 144.66 | 0.561 | 11.7 | -- | -- | -- | -- | -- | 0.235 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 48.42 | temperature | 10 | 90 | > th | dose dependent | rect. | 7 | 21 |
| 6 | 49.44 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 16 | 50.52 | temperature | 25 | 90 | < th | dose independent | rect. | 4 | 13 |
| 25 | 50.97 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 15 |
| 27 | 51.00 | temperature | 20 | 270 | > th | dose dependent | rect. | 6 | 5 |
| 35 | 51.31 | temperature | 30 | 90 | < th | dose dependent | sin | 4 | NA |
| 36 | 51.42 | temperature | 10 | 270 | > th | dose dependent | rect. | 21 | 14 |
| 44 | 51.59 | temperature | 20 | 270 | > th | dose dependent | rect. | 7 | 3 |
| 66 | 51.98 | temperature | 20 | 90 | > th | dose dependent | sin | 4 | NA |
| 69 | 52.02 | temperature | 25 | 90 | > th | dose independent | sin | 3 | NA |
| 78 | 52.27 | temperature | 10 | 90 | > th | dose dependent | sin | 4 | NA |
| 83 | 52.40 | temperature | 25 | 30 | > th | dose independent | rect. | 7 | 7 |
| 100 | 52.55 | temperature | 25 | 270 | > th | dose independent | rect. | 22 | 14 |
| 106 | 52.62 | temperature | 25 | 90 | < th | dose independent | sin | 4 | NA |
| 108 | 52.64 | temperature | 25 | 90 | > th | dose independent | rect. | 7 | 5 |
| 120 | 52.71 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 7 |
| 122 | 52.75 | temperature | 25 | 270 | < th | dose independent | sin | 6 | NA |
| 126 | 52.78 | temperature | 25 | 270 | > th | dose independent | sin | 6 | NA |
| 168 | 53.13 | temperature | 25 | 270 | < th | dose independent | rect. | 23 | 20 |
| 197 | 53.36 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 15 |
| 285 | 54.00 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 290 | 54.03 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 18 |
| 365 | 54.50 | temperature | 25 | 90 | < th | dose independent | rect. | 3 | 20 |
| 441 | 54.89 | temperature | 25 | 30 | > th | dose independent | rect. | 7 | 12 |
| 452 | 54.94 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 569 | 55.46 | temperature | 25 | 10 | > th | dose dependent | rect. | 4 | 8 |
| 706 | 55.99 | temperature | 25 | 270 | > th | dose independent | rect. | 20 | 21 |
| 717 | 56.05 | temperature | 25 | 90 | > th | dose independent | rect. | 22 | 21 |
| 810 | 56.39 | temperature | 25 | 90 | > th | dose independent | rect. | 7 | 20 |
| 836 | 56.47 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 12 |
| 921 | 56.77 | temperature | 15 | 90 | > th | dose dependent | rect. | 7 | 12 |