Os10g0577200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0577200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 48.03 | 0.326 | 9.98 | 0.437 | 0.629 | 1.57 | -0.367 | 2.64 | -0.0433 | 5.72 | 0.1701 | 1462 | -- | -- |
| 50.97 | 0.333 | 9.98 | 0.619 | 0.623 | 0.844 | -0.32 | -- | -0.0691 | 5.41 | 0.17 | 1449 | -- | -- |
| 48.3 | 0.324 | 9.98 | 0.43 | 0.63 | 1.56 | -- | 2.64 | -0.0428 | 5.47 | 0.171 | 1453 | -- | -- |
| 50.51 | 0.331 | 9.97 | 0.639 | 0.616 | 1 | -- | -- | -0.051 | 3.47 | 0.1699 | 1310 | -- | -- |
| 52.33 | 0.337 | 9.97 | 0.443 | -- | 1.3 | -- | 0.837 | -0.0968 | -- | 0.2843 | 3535 | -- | -- |
| 58.76 | 0.359 | 9.96 | 0.402 | 0.628 | -- | -0.352 | -- | -0.109 | 5.32 | -- | -- | -- | -- |
| 59.06 | 0.36 | 9.96 | 0.401 | 0.625 | -- | -- | -- | -0.108 | 5.24 | -- | -- | -- | -- |
| 50.39 | 0.331 | 9.95 | 0.696 | -- | 1.3 | -- | -- | 0.0259 | -- | 0.17 | 3540 | -- | -- |
| 58.63 | 0.357 | 9.98 | -- | 0.641 | 0.748 | -- | -- | -0.115 | 3.81 | 1.765 | 1299 | -- | -- |
| 79.5 | 0.417 | 9.96 | 0.423 | -- | -- | -- | -- | -0.092 | -- | -- | -- | -- | -- |
| 63.3 | 0.372 | 9.97 | -- | 0.632 | -- | -- | -- | -0.152 | 5.21 | -- | -- | -- | -- |
| 59.18 | 0.358 | 9.95 | -- | -- | 1.12 | -- | -- | -0.0273 | -- | 2 | 3540 | -- | -- |
| 84.22 | 0.428 | 9.98 | -- | -- | -- | -- | -- | -0.139 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 45.62 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 6 | 46.08 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 24 | 10 |
| 21 | 46.33 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 10 |
| 24 | 46.37 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 25 | 46.40 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 32 | 46.47 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 24 | 16 |
| 47 | 46.59 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 8 | NA |
| 56 | 46.62 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 22 | 7 |
| 71 | 46.70 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 72 | 46.73 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 77 | 46.75 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 23 | 9 |
| 85 | 46.80 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 86 | 46.80 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 107 | 46.90 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 129 | 46.99 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 136 | 47.02 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 137 | 47.02 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 150 | 47.06 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 22 | 6 |
| 178 | 47.15 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 200 | 47.21 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 227 | 47.25 | humidity | 90.0 | 14400 | > th | dose independent | sin | 9 | NA |
| 262 | 47.34 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 22 | 3 |
| 268 | 47.36 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 311 | 47.47 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 321 | 47.49 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 329 | 47.51 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 16 | 12 |
| 341 | 47.54 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 342 | 47.54 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 15 | 2 |
| 343 | 47.54 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 15 | 2 |
| 353 | 47.56 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 15 | 2 |
| 357 | 47.56 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 16 | 13 |
| 366 | 47.58 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 373 | 47.60 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 405 | 47.64 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 11 | 18 |
| 408 | 47.65 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 434 | 47.68 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 13 | 4 |
| 450 | 47.70 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 11 | 18 |
| 451 | 47.70 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 1 | 19 |
| 456 | 47.70 | humidity | 90.0 | 14400 | > th | dose dependent | no | NA | NA |
| 461 | 47.71 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 18 | 7 |
| 463 | 47.72 | atmosphere | 1005.0 | 43200 | < th | dose independent | sin | 15 | NA |
| 505 | 47.75 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 16 | 8 |
| 506 | 47.75 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 23 | 10 |
| 561 | 47.78 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 15 | 2 |
| 563 | 47.79 | atmosphere | 1005.0 | 43200 | > th | dose independent | sin | 14 | NA |
| 613 | 47.82 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 629 | 47.82 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 16 | 23 |
| 631 | 47.82 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 18 | 2 |
| 650 | 47.83 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 14 | 22 |
| 654 | 47.83 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 16 | 16 |
| 656 | 47.84 | atmosphere | 1005.0 | 43200 | > th | dose independent | no | NA | NA |
| 669 | 47.84 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 1 | 19 |
| 694 | 47.85 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 23 |
| 745 | 47.88 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 23 | 20 |
| 753 | 47.88 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 754 | 47.89 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 758 | 47.89 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 16 | 8 |
| 794 | 47.90 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 18 | 23 |
| 799 | 47.91 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 800 | 47.91 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 13 | 4 |
| 821 | 47.92 | atmosphere | 1005.0 | 43200 | > th | dose independent | sin | 0 | NA |
| 824 | 47.92 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 7 |
| 839 | 47.92 | radiation | 30.0 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 840 | 47.93 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 872 | 47.94 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 6 | 14 |
| 887 | 47.95 | atmosphere | 1005.0 | 43200 | < th | dose independent | no | NA | NA |
| 888 | 47.95 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 891 | 47.95 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 10 | 5 |
| 898 | 47.95 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 8 | 15 |
| 912 | 47.96 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 923 | 47.96 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 8 | 12 |
| 939 | 47.96 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 16 | 23 |
| 948 | 47.97 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 15 | 1 |