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Os10g0577000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : NERD domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.2 (0.0136) R2 : 0.0491
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.139 (0.0286) R2dN8 : 0.0634 R2N8 : 0.0491
σ : 0.256
deviance : 30.13
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
16.16 0.189 11.2 -0.494 0.111 0.697 0.428 -1.67 -0.0558 20 19.98 299 -- --
17.84 0.197 11.2 -0.207 0.0843 0.817 0.361 -- 0.012 22.1 15.48 285 -- --
16.62 0.19 11.2 -0.458 0.14 0.686 -- -1.44 -0.0379 19.8 19.3 245 -- --
17.69 0.196 11.2 -0.216 0.193 0.728 -- -- 0.0307 16 11.78 601 -- --
17.1 0.193 11.2 -0.495 -- 0.76 -- -1.49 -0.0616 -- 20.32 358 -- --
24.02 0.23 11.2 -0.0431 0.341 -- 0.0214 -- 0.141 17.7 -- -- -- --
24.02 0.23 11.2 -0.0432 0.341 -- -- -- 0.141 17.7 -- -- -- --
18.46 0.2 11.2 -0.238 -- 0.878 -- -- 0.0103 -- 14.15 388 -- --
18.79 0.202 11.2 -- 0.204 0.63 -- -- 0.067 16.5 10.21 573 -- --
30.05 0.256 11.2 -0.0539 -- -- -- -- 0.133 -- -- -- -- --
24.07 0.229 11.2 -- 0.342 -- -- -- 0.146 17.7 -- -- -- --
19.84 0.207 11.2 -- -- 0.76 -- -- 0.0465 -- 15.46 379 -- --
30.13 0.256 11.2 -- -- -- -- -- 0.139 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 15.70 radiation 1 14400 < th dose dependent rect. 4 1
3 15.71 temperature 10 720 > th dose dependent rect. 21 20
5 15.73 temperature 10 270 > th dose dependent rect. 2 23
8 15.80 temperature 20 270 > th dose dependent rect. 12 23
14 15.89 temperature 15 720 > th dose dependent rect. 23 19
15 15.90 wind 9 43200 > th dose dependent rect. 18 3
18 15.91 wind 9 43200 < th dose independent rect. 18 3
19 15.91 temperature 20 720 > th dose dependent rect. 21 17
25 15.96 wind 9 43200 > th dose independent rect. 18 3
38 16.02 temperature 20 720 > th dose dependent sin 7 NA
46 16.05 temperature 20 270 > th dose dependent rect. 23 23
47 16.06 radiation 1 14400 > th dose independent rect. 18 1
71 16.10 temperature 20 270 > th dose dependent rect. 14 23
72 16.11 temperature 20 270 > th dose dependent rect. 21 23
81 16.17 temperature 30 10 < th dose dependent rect. 7 23
82 16.18 temperature 20 270 > th dose dependent no NA NA
96 16.21 wind 1 43200 > th dose dependent rect. 20 1
100 16.22 wind 9 43200 < th dose dependent rect. 20 1
111 16.24 wind 5 43200 > th dose independent rect. 11 6
112 16.24 temperature 10 720 > th dose dependent rect. 20 15
122 16.27 wind 5 43200 > th dose independent rect. 13 3
123 16.27 wind 5 43200 < th dose independent rect. 11 6
124 16.27 wind 5 43200 > th dose independent rect. 11 10
125 16.27 wind 9 43200 > th dose dependent rect. 18 12
131 16.28 wind 5 43200 > th dose independent rect. 14 1
132 16.28 wind 5 43200 > th dose independent rect. 14 8
146 16.31 wind 5 43200 < th dose independent rect. 11 10
155 16.32 wind 3 43200 > th dose dependent rect. 13 2
161 16.33 wind 5 43200 > th dose dependent rect. 15 1
162 16.33 wind 3 43200 > th dose dependent rect. 11 5
168 16.34 wind 5 43200 < th dose independent rect. 13 9
173 16.34 wind 3 43200 > th dose dependent rect. 11 11
204 16.37 wind 9 43200 > th dose dependent rect. 18 7
233 16.39 radiation 1 14400 < th dose dependent rect. 18 1
235 16.39 radiation 1 14400 < th dose dependent rect. 18 4
236 16.39 wind 3 43200 > th dose dependent rect. 13 9
276 16.42 temperature 30 10 < th dose dependent rect. 9 21
277 16.43 wind 5 43200 > th dose independent sin 19 NA
278 16.43 wind 3 43200 > th dose independent rect. 20 1
286 16.44 wind 5 43200 < th dose independent sin 19 NA
357 16.49 radiation 1 14400 < th dose independent rect. 18 1
360 16.49 radiation 1 14400 < th dose independent rect. 18 4
361 16.49 radiation 1 14400 < th dose independent rect. 18 6
368 16.49 wind 3 43200 > th dose dependent sin 20 NA
371 16.49 wind 5 43200 > th dose dependent rect. 14 7
428 16.54 wind 9 43200 < th dose dependent rect. 11 4
532 16.64 wind 3 43200 < th dose independent rect. 20 1
538 16.64 wind 9 43200 < th dose dependent rect. 13 2
629 16.71 radiation 40 43200 > th dose independent rect. 9 2
645 16.72 radiation 40 43200 < th dose independent rect. 9 1
647 16.72 wind 9 43200 > th dose independent rect. 18 7
653 16.72 radiation 20 43200 > th dose dependent rect. 9 1
692 16.74 radiation 40 43200 > th dose dependent rect. 11 1
709 16.75 wind 9 43200 < th dose dependent rect. 11 11
714 16.76 humidity 80 43200 > th dose independent rect. 21 1
757 16.78 humidity 80 43200 < th dose independent rect. 21 1
763 16.78 temperature 20 1440 > th dose dependent rect. 17 5
769 16.78 temperature 30 10 < th dose dependent rect. 11 23
834 16.82 temperature 20 1440 > th dose dependent rect. 16 16
840 16.82 temperature 30 10 < th dose dependent rect. 15 23
848 16.83 temperature 30 10 < th dose dependent no NA NA
872 16.84 humidity 90 14400 > th dose dependent rect. 21 7
882 16.84 wind 5 43200 > th dose dependent rect. 13 18
895 16.85 temperature 20 1440 > th dose dependent rect. 6 1
948 16.86 temperature 15 10 > th dose dependent no NA NA
966 16.86 temperature 10 720 > th dose dependent rect. 12 21