Os10g0576900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : NAD-dependent epimerase/dehydratase family protein.
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Os10g0576900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : NAD-dependent epimerase/dehydratase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 83.98 | 0.431 | 9.42 | -1.49 | 1.56 | -0.585 | -0.177 | 0.757 | -0.387 | 5.94 | 0.3899 | 100 | -- | -- |
| 87.32 | 0.435 | 9.42 | -1.48 | 1.55 | -0.582 | -0.0937 | -- | -0.391 | 5.96 | 0.4645 | 103 | -- | -- |
| 84.05 | 0.427 | 9.42 | -1.5 | 1.56 | -0.585 | -- | 0.75 | -0.388 | 5.94 | 0.39 | 103 | -- | -- |
| 87.19 | 0.435 | 9.42 | -1.47 | 1.58 | -0.616 | -- | -- | -0.392 | 5.85 | 0.5092 | 110 | -- | -- |
| 186.17 | 0.639 | 9.44 | -1.43 | -- | -0.598 | -- | 0.814 | -0.328 | -- | 1.91 | 20 | -- | -- |
| 90.8 | 0.447 | 9.39 | -1.41 | 1.59 | -- | -0.715 | -- | -0.336 | 7.63 | -- | -- | -- | -- |
| 92.23 | 0.45 | 9.39 | -1.43 | 1.59 | -- | -- | -- | -0.335 | 7.6 | -- | -- | -- | -- |
| 188.61 | 0.642 | 9.44 | -1.42 | -- | -0.607 | -- | -- | -0.334 | -- | 3.31 | 10 | -- | -- |
| 143.85 | 0.559 | 9.37 | -- | 1.5 | -0.461 | -- | -- | -0.206 | 6.33 | 1.279 | 86 | -- | -- |
| 228.78 | 0.707 | 9.43 | -1.41 | -- | -- | -- | -- | -0.311 | -- | -- | -- | -- | -- |
| 146.35 | 0.566 | 9.36 | -- | 1.58 | -- | -- | -- | -0.176 | 7.66 | -- | -- | -- | -- |
| 240.96 | 0.725 | 9.4 | -- | -- | -0.617 | -- | -- | -0.181 | -- | 5.26 | 6 | -- | -- |
| 281.25 | 0.783 | 9.4 | -- | -- | -- | -- | -- | -0.155 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 79.47 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 8 |
| 2 | 79.63 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 23 | 17 |
| 3 | 79.75 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 23 | 15 |
| 14 | 79.99 | radiation | 1.0 | 10 | < th | dose independent | rect. | 23 | 17 |
| 26 | 80.17 | radiation | 1.0 | 30 | < th | dose independent | rect. | 23 | 15 |
| 32 | 80.30 | radiation | 1.0 | 90 | < th | dose dependent | sin | 10 | NA |
| 33 | 80.35 | wind | 5.0 | 270 | < th | dose independent | rect. | 22 | 16 |
| 34 | 80.49 | radiation | 1.0 | 90 | < th | dose independent | sin | 10 | NA |
| 35 | 80.50 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 23 | 13 |
| 39 | 80.56 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 9 |
| 40 | 80.56 | temperature | 25.0 | 270 | < th | dose independent | rect. | 2 | 10 |
| 47 | 80.65 | radiation | 1.0 | 30 | < th | dose independent | rect. | 23 | 13 |
| 49 | 80.67 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 23 | 9 |
| 53 | 80.68 | radiation | 1.0 | 30 | < th | dose independent | rect. | 23 | 9 |
| 63 | 80.72 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 7 | 10 |
| 89 | 80.87 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 5 | 18 |
| 96 | 80.96 | radiation | 1.0 | 90 | > th | dose independent | rect. | 17 | 14 |
| 119 | 81.12 | temperature | 25.0 | 270 | > th | dose independent | rect. | 7 | 7 |
| 123 | 81.16 | temperature | 15.0 | 270 | > th | dose independent | rect. | 16 | 15 |
| 127 | 81.21 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 19 | 22 |
| 130 | 81.26 | temperature | 25.0 | 270 | > th | dose independent | rect. | 23 | 15 |
| 146 | 81.36 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 23 | 6 |
| 151 | 81.40 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 9 |
| 176 | 81.59 | radiation | 1.0 | 90 | < th | dose independent | rect. | 19 | 22 |
| 191 | 81.67 | wind | 9.0 | 270 | < th | dose dependent | rect. | 21 | 17 |
| 204 | 81.74 | radiation | 1.0 | 90 | > th | dose independent | sin | 10 | NA |
| 220 | 81.84 | wind | 5.0 | 10 | < th | dose independent | rect. | 23 | 6 |
| 252 | 81.99 | wind | 9.0 | 90 | < th | dose dependent | rect. | 7 | 22 |
| 253 | 82.00 | wind | 7.0 | 90 | < th | dose independent | rect. | 9 | 8 |
| 288 | 82.17 | wind | 9.0 | 10 | < th | dose dependent | rect. | 23 | 6 |
| 350 | 82.33 | wind | 3.0 | 90 | < th | dose independent | rect. | 7 | 22 |
| 362 | 82.38 | radiation | 1.0 | 10 | > th | dose independent | sin | 7 | NA |
| 365 | 82.38 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 17 | 14 |
| 376 | 82.44 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 10 |
| 386 | 82.46 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 22 | 16 |
| 388 | 82.47 | wind | 9.0 | 30 | < th | dose dependent | rect. | 23 | 17 |
| 391 | 82.48 | temperature | 10.0 | 10 | > th | dose independent | rect. | 23 | 6 |
| 392 | 82.48 | temperature | 30.0 | 10 | < th | dose independent | rect. | 23 | 6 |
| 393 | 82.48 | humidity | 50.0 | 10 | > th | dose independent | rect. | 23 | 6 |
| 396 | 82.48 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 23 | 6 |
| 403 | 82.48 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 16 | 15 |
| 404 | 82.48 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 18 |
| 406 | 82.48 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 5 | 18 |
| 415 | 82.48 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 16 | 15 |
| 417 | 82.49 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 5 | 18 |
| 418 | 82.49 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 5 | 18 |
| 425 | 82.51 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 8 | 10 |
| 426 | 82.52 | wind | 9.0 | 1440 | < th | dose independent | rect. | 24 | 7 |
| 432 | 82.54 | wind | 5.0 | 270 | < th | dose independent | rect. | 20 | 7 |
| 435 | 82.54 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 20 |
| 448 | 82.59 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 7 | 8 |
| 452 | 82.60 | temperature | 15.0 | 270 | > th | dose independent | rect. | 14 | 8 |
| 456 | 82.60 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 23 | 6 |
| 457 | 82.60 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 8 |
| 467 | 82.63 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 14 | 8 |
| 476 | 82.65 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 5 | 18 |
| 485 | 82.69 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 5 | 2 |
| 487 | 82.69 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 9 |
| 488 | 82.69 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 9 |
| 499 | 82.73 | radiation | 40.0 | 270 | < th | dose independent | rect. | 16 | 15 |
| 503 | 82.74 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 22 | 23 |
| 525 | 82.79 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 5 | 17 |
| 528 | 82.79 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 5 | 17 |
| 531 | 82.80 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 20 | 21 |
| 532 | 82.81 | radiation | 1.0 | 90 | > th | dose independent | rect. | 5 | 2 |
| 535 | 82.81 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 17 | 14 |
| 556 | 82.84 | wind | 9.0 | 270 | < th | dose independent | rect. | 16 | 15 |
| 557 | 82.84 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 5 | 2 |
| 586 | 82.88 | humidity | 60.0 | 4320 | < th | dose dependent | rect. | 15 | 19 |
| 587 | 82.89 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 16 |
| 589 | 82.89 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 16 |
| 630 | 82.94 | radiation | 1.0 | 10 | < th | dose independent | rect. | 20 | 21 |
| 635 | 82.95 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 19 | 15 |
| 636 | 82.96 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 23 | 6 |
| 640 | 82.96 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 23 | 6 |
| 644 | 82.97 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 5 | 2 |
| 665 | 82.99 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 1 | 3 |
| 670 | 82.99 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 19 | 13 |
| 676 | 83.00 | wind | 7.0 | 90 | < th | dose independent | rect. | 7 | 22 |
| 683 | 83.01 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 689 | 83.02 | wind | 9.0 | 10 | < th | dose independent | rect. | 7 | 23 |
| 706 | 83.03 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 5 | 3 |
| 719 | 83.06 | temperature | 25.0 | 270 | < th | dose independent | sin | 5 | NA |
| 726 | 83.08 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 9 |
| 733 | 83.09 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 8 |
| 738 | 83.09 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 8 |
| 743 | 83.10 | wind | 9.0 | 270 | < th | dose dependent | rect. | 20 | 7 |
| 751 | 83.11 | humidity | 60.0 | 4320 | < th | dose dependent | rect. | 15 | 3 |
| 807 | 83.15 | wind | 5.0 | 270 | < th | dose independent | rect. | 7 | 20 |
| 808 | 83.15 | humidity | 60.0 | 4320 | < th | dose dependent | sin | 12 | NA |
| 828 | 83.18 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 5 | 15 |
| 842 | 83.21 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 24 | 7 |
| 845 | 83.21 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 24 | 7 |
| 849 | 83.21 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 24 | 7 |
| 854 | 83.21 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 24 | 7 |
| 855 | 83.21 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 24 | 7 |
| 859 | 83.21 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 17 |
| 867 | 83.21 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 5 | 14 |
| 878 | 83.23 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 886 | 83.24 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 891 | 83.24 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 7 |
| 895 | 83.25 | wind | 1.0 | 90 | > th | dose independent | rect. | 23 | 6 |
| 906 | 83.27 | radiation | 1.0 | 90 | < th | dose independent | rect. | 19 | 15 |
| 946 | 83.31 | radiation | 1.0 | 90 | < th | dose independent | rect. | 19 | 13 |
| 947 | 83.31 | temperature | 15.0 | 10 | > th | dose independent | rect. | 18 | 14 |
| 967 | 83.33 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 20 | 18 |
| 971 | 83.34 | humidity | 60.0 | 270 | > th | dose independent | rect. | 19 | 8 |
| 973 | 83.34 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 16 | 15 |
| 975 | 83.34 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 23 | 7 |
| 980 | 83.35 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 8 |
| 981 | 83.35 | temperature | 30.0 | 270 | < th | dose independent | rect. | 19 | 8 |
| 983 | 83.35 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 8 |
| 984 | 83.35 | radiation | 1.0 | 270 | < th | dose independent | rect. | 19 | 8 |
| 989 | 83.35 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 16 |
| 990 | 83.35 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 16 |
| 993 | 83.35 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 19 | 8 |