Os10g0573400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os10g0573400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 52.76 | 0.341 | 11.9 | 0.324 | 0.229 | 0.68 | 1.66 | -0.821 | -0.204 | 6.24 | 79.73 | 793 | -- | -- |
| 53.25 | 0.34 | 11.9 | 0.356 | 0.155 | 0.616 | 1.85 | -- | -0.21 | 6.7 | 80.75 | 865 | -- | -- |
| 57.36 | 0.353 | 11.9 | 0.325 | 0.254 | 0.57 | -- | -1.59 | -0.217 | 3.73 | 82 | 726 | -- | -- |
| 60.2 | 0.364 | 11.9 | 0.45 | 0.529 | 0.581 | -- | -- | -0.215 | 1.25 | 82 | 726 | -- | -- |
| 60.06 | 0.361 | 11.9 | 0.313 | -- | 0.66 | -- | -1.41 | -0.214 | -- | 78.44 | 926 | -- | -- |
| 61.55 | 0.368 | 11.9 | 0.446 | 0.129 | -- | -1.57 | -- | -0.229 | 19.9 | -- | -- | -- | -- |
| 64.53 | 0.376 | 11.9 | 0.476 | 0.285 | -- | -- | -- | -0.237 | 0.403 | -- | -- | -- | -- |
| 62.15 | 0.367 | 11.9 | 0.374 | -- | 0.573 | -- | -- | -0.214 | -- | 78.93 | 1036 | -- | -- |
| 64.12 | 0.373 | 11.9 | -- | 0.203 | 0.506 | -- | -- | -0.258 | 0.284 | 74 | 1222 | -- | -- |
| 69.64 | 0.39 | 11.9 | 0.486 | -- | -- | -- | -- | -0.233 | -- | -- | -- | -- | -- |
| 70.5 | 0.393 | 11.9 | -- | 0.292 | -- | -- | -- | -0.29 | 0.487 | -- | -- | -- | -- |
| 66 | 0.378 | 11.9 | -- | -- | 0.642 | -- | -- | -0.241 | -- | 76.78 | 1069 | -- | -- |
| 75.87 | 0.407 | 11.9 | -- | -- | -- | -- | -- | -0.287 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 49.60 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 1 | 15 |
| 5 | 50.21 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 1 | 14 |
| 10 | 50.45 | humidity | 60.0 | 270 | > th | dose independent | rect. | 10 | 9 |
| 18 | 50.65 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 11 | 10 |
| 21 | 50.72 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 11 | 10 |
| 25 | 50.80 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 10 | 8 |
| 35 | 50.92 | humidity | 60.0 | 270 | > th | dose independent | rect. | 24 | 18 |
| 45 | 51.14 | humidity | 60.0 | 720 | > th | dose independent | rect. | 16 | 21 |
| 74 | 51.49 | humidity | 70.0 | 720 | > th | dose independent | rect. | 17 | 14 |
| 79 | 51.51 | humidity | 80.0 | 10 | > th | dose independent | rect. | 1 | 15 |
| 81 | 51.52 | humidity | 70.0 | 720 | < th | dose independent | rect. | 15 | 17 |
| 93 | 51.60 | humidity | 70.0 | 720 | > th | dose independent | rect. | 16 | 18 |
| 98 | 51.63 | humidity | 50.0 | 270 | > th | dose independent | rect. | 22 | 22 |
| 104 | 51.66 | humidity | 70.0 | 720 | > th | dose independent | sin | 12 | NA |
| 105 | 51.66 | humidity | 70.0 | 720 | < th | dose independent | rect. | 15 | 4 |
| 108 | 51.68 | radiation | 20.0 | 30 | < th | dose independent | rect. | 1 | 14 |
| 117 | 51.71 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 11 | 7 |
| 165 | 51.87 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 11 | 4 |
| 175 | 51.92 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 12 | 9 |
| 177 | 51.93 | wind | 1.0 | 30 | > th | dose independent | rect. | 17 | 8 |
| 184 | 51.95 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 13 | 6 |
| 198 | 51.99 | humidity | 50.0 | 10 | > th | dose dependent | sin | 0 | NA |
| 205 | 52.01 | humidity | 70.0 | 720 | < th | dose independent | sin | 14 | NA |
| 222 | 52.03 | radiation | 40.0 | 90 | < th | dose independent | rect. | 1 | 14 |
| 241 | 52.09 | humidity | 60.0 | 720 | > th | dose independent | sin | 1 | NA |
| 286 | 52.21 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 13 | 20 |
| 317 | 52.28 | radiation | 30.0 | 90 | < th | dose dependent | sin | 6 | NA |
| 329 | 52.30 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 1 | 20 |
| 357 | 52.34 | humidity | 90.0 | 720 | < th | dose dependent | sin | 19 | NA |
| 378 | 52.38 | humidity | 80.0 | 720 | < th | dose dependent | sin | 17 | NA |
| 406 | 52.44 | humidity | 60.0 | 720 | > th | dose independent | rect. | 9 | 4 |
| 444 | 52.50 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 3 | 14 |
| 465 | 52.54 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 3 | 17 |
| 480 | 52.57 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 1 | 16 |
| 514 | 52.62 | wind | 9.0 | 30 | < th | dose independent | rect. | 17 | 8 |
| 515 | 52.62 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 17 | 8 |
| 521 | 52.62 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 17 | 8 |
| 537 | 52.64 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 17 | 8 |
| 539 | 52.64 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 1 | 16 |
| 541 | 52.64 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 22 | 4 |
| 542 | 52.64 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 1 | 16 |
| 558 | 52.66 | radiation | 1.0 | 720 | > th | dose dependent | rect. | 15 | 3 |
| 573 | 52.67 | temperature | 10.0 | 10 | > th | dose independent | rect. | 17 | 8 |
| 575 | 52.67 | radiation | 20.0 | 10 | < th | dose independent | rect. | 17 | 8 |
| 581 | 52.67 | temperature | 10.0 | 10 | > th | dose independent | rect. | 1 | 16 |
| 586 | 52.67 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 1 | 16 |
| 615 | 52.69 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 19 | 7 |
| 620 | 52.70 | radiation | 30.0 | 30 | < th | dose dependent | rect. | 16 | 9 |
| 622 | 52.71 | humidity | 50.0 | 10 | > th | dose independent | rect. | 17 | 8 |
| 624 | 52.71 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 17 | 9 |
| 681 | 52.79 | wind | 7.0 | 90 | < th | dose independent | rect. | 21 | 14 |
| 698 | 52.81 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 15 | 1 |
| 716 | 52.83 | wind | 9.0 | 30 | < th | dose independent | rect. | 1 | 16 |
| 725 | 52.84 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 18 | 8 |
| 728 | 52.84 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 18 | 8 |
| 730 | 52.84 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 18 | 8 |
| 743 | 52.84 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 2 | 16 |
| 751 | 52.84 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 17 | 8 |
| 761 | 52.86 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 18 | 8 |
| 776 | 52.87 | humidity | 70.0 | 10 | > th | dose independent | rect. | 17 | 8 |
| 832 | 52.92 | radiation | 10.0 | 720 | > th | dose independent | sin | 14 | NA |
| 838 | 52.92 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 9 | 8 |
| 841 | 52.92 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 21 | 14 |
| 844 | 52.93 | radiation | 1.0 | 720 | > th | dose independent | rect. | 12 | 7 |
| 912 | 52.98 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 1 | 17 |
| 947 | 53.01 | temperature | 30.0 | 30 | < th | dose independent | rect. | 1 | 16 |
| 974 | 53.03 | humidity | 50.0 | 720 | > th | dose dependent | sin | 1 | NA |