Os10g0573100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to AMME syndrome candidate gene 1 protein.
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Os10g0573100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to AMME syndrome candidate gene 1 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 36.26 | 0.283 | 11.6 | -1.48 | 0.557 | 0.657 | -0.529 | 1.18 | -0.53 | 14.9 | 5 | 4603 | -- | -- |
| 37.42 | 0.285 | 11.6 | -1.47 | 0.585 | 0.517 | -0.452 | -- | -0.515 | 14.8 | 4.842 | 4576 | -- | -- |
| 37.18 | 0.284 | 11.6 | -1.5 | 0.555 | 0.652 | -- | 1.1 | -0.535 | 14.7 | 5.091 | 4603 | -- | -- |
| 37.68 | 0.286 | 11.5 | -1.49 | 0.629 | 0.496 | -- | -- | -0.507 | 15 | 7.299 | 4603 | -- | -- |
| 54.41 | 0.344 | 11.6 | -1.5 | -- | 0.793 | -- | 1.26 | -0.58 | -- | 5.191 | 4657 | -- | -- |
| 41.01 | 0.3 | 11.5 | -1.68 | 0.612 | -- | -0.474 | -- | -0.502 | 14.8 | -- | -- | -- | -- |
| 41.77 | 0.303 | 11.5 | -1.69 | 0.609 | -- | -- | -- | -0.505 | 14.7 | -- | -- | -- | -- |
| 53.71 | 0.341 | 11.6 | -1.54 | -- | 0.621 | -- | -- | -0.568 | -- | 7.8 | 4638 | -- | -- |
| 60.7 | 0.363 | 11.5 | -- | 0.576 | 1.38 | -- | -- | -0.107 | 14.9 | 6.298 | 44908 | -- | -- |
| 63.37 | 0.372 | 11.5 | -1.72 | -- | -- | -- | -- | -0.52 | -- | -- | -- | -- | -- |
| 117.16 | 0.506 | 11.5 | -- | 0.642 | -- | -- | -- | -0.316 | 14.7 | -- | -- | -- | -- |
| 80.2 | 0.417 | 11.5 | -- | -- | 1.39 | -- | -- | -0.116 | -- | 6.619 | 45014 | -- | -- |
| 141.16 | 0.555 | 11.5 | -- | -- | -- | -- | -- | -0.33 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 34.86 | temperature | 20.0 | 270 | > th | dose independent | rect. | 17 | 10 |
| 4 | 35.37 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 9 | 35.68 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 13 | 35.76 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 14 | 35.77 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 2 |
| 16 | 35.79 | humidity | 80.0 | 720 | < th | dose independent | rect. | 19 | 22 |
| 18 | 35.86 | wind | 5.0 | 1440 | > th | dose independent | rect. | 17 | 1 |
| 21 | 35.88 | humidity | 80.0 | 720 | > th | dose independent | rect. | 8 | 21 |
| 22 | 35.89 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 10 | 3 |
| 23 | 35.91 | wind | 5.0 | 1440 | < th | dose independent | rect. | 17 | 1 |
| 25 | 35.94 | temperature | 25.0 | 270 | < th | dose independent | rect. | 20 | 11 |
| 37 | 36.10 | wind | 1.0 | 43200 | > th | dose independent | rect. | 2 | 5 |
| 43 | 36.16 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 9 | 5 |
| 44 | 36.17 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 24 | 16 |
| 51 | 36.23 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 10 |
| 55 | 36.25 | humidity | 80.0 | 720 | > th | dose independent | rect. | 19 | 20 |
| 56 | 36.25 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 64 | 36.28 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 7 | 20 |
| 66 | 36.29 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 22 | 6 |
| 69 | 36.31 | temperature | 20.0 | 10 | > th | dose independent | rect. | 19 | 11 |
| 70 | 36.31 | wind | 5.0 | 90 | > th | dose independent | rect. | 12 | 12 |
| 75 | 36.32 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 22 | 3 |
| 76 | 36.32 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 10 | 19 |
| 84 | 36.35 | wind | 1.0 | 43200 | < th | dose independent | rect. | 2 | 5 |
| 102 | 36.44 | temperature | 20.0 | 720 | > th | dose independent | rect. | 17 | 4 |
| 122 | 36.49 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 14 | 2 |
| 124 | 36.49 | wind | 9.0 | 4320 | < th | dose independent | rect. | 19 | 9 |
| 125 | 36.49 | humidity | 80.0 | 720 | > th | dose independent | rect. | 23 | 16 |
| 127 | 36.49 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 14 | 2 |
| 134 | 36.50 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 24 | 16 |
| 135 | 36.50 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 24 | 20 |
| 153 | 36.54 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 24 | 4 |
| 159 | 36.55 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 24 | 1 |
| 164 | 36.56 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 14 | 2 |
| 166 | 36.56 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 14 | 2 |
| 181 | 36.59 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 9 | 22 |
| 190 | 36.61 | wind | 3.0 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 199 | 36.63 | wind | 5.0 | 4320 | > th | dose independent | rect. | 15 | 19 |
| 204 | 36.63 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 19 | 10 |
| 213 | 36.64 | humidity | 80.0 | 720 | > th | dose independent | rect. | 24 | 21 |
| 219 | 36.65 | wind | 5.0 | 90 | > th | dose independent | rect. | 12 | 7 |
| 230 | 36.66 | wind | 5.0 | 90 | > th | dose independent | rect. | 12 | 9 |
| 237 | 36.66 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 5 |
| 242 | 36.67 | temperature | 25.0 | 270 | > th | dose independent | sin | 10 | NA |
| 246 | 36.67 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 21 | 2 |
| 248 | 36.68 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 24 | 1 |
| 265 | 36.69 | wind | 5.0 | 4320 | < th | dose independent | rect. | 14 | 20 |
| 270 | 36.70 | temperature | 20.0 | 720 | < th | dose independent | rect. | 19 | 2 |
| 277 | 36.70 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 3 | 13 |
| 314 | 36.74 | temperature | 20.0 | 720 | < th | dose independent | rect. | 18 | 4 |
| 326 | 36.74 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 8 | 13 |
| 360 | 36.76 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 14 | 21 |
| 364 | 36.77 | humidity | 80.0 | 720 | > th | dose independent | rect. | 19 | 10 |
| 368 | 36.77 | wind | 5.0 | 90 | > th | dose independent | rect. | 12 | 20 |
| 371 | 36.77 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 22 | 22 |
| 377 | 36.78 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 21 | 4 |
| 379 | 36.78 | wind | 5.0 | 270 | < th | dose independent | rect. | 8 | 13 |
| 385 | 36.78 | wind | 5.0 | 4320 | > th | dose dependent | sin | 13 | NA |
| 390 | 36.78 | wind | 3.0 | 90 | > th | dose dependent | rect. | 12 | 13 |
| 397 | 36.79 | humidity | 80.0 | 720 | > th | dose independent | rect. | 8 | 13 |
| 407 | 36.80 | temperature | 25.0 | 270 | < th | dose independent | sin | 11 | NA |
| 412 | 36.80 | wind | 5.0 | 4320 | > th | dose independent | rect. | 16 | 13 |
| 423 | 36.80 | wind | 1.0 | 90 | > th | dose dependent | rect. | 12 | 21 |
| 456 | 36.82 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 4 |
| 468 | 36.83 | humidity | 80.0 | 720 | > th | dose independent | rect. | 23 | 6 |
| 489 | 36.84 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 1 | 16 |
| 503 | 36.85 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 24 | 1 |
| 505 | 36.85 | temperature | 25.0 | 90 | > th | dose independent | rect. | 24 | 6 |
| 509 | 36.85 | temperature | 20.0 | 270 | > th | dose independent | rect. | 7 | 14 |
| 513 | 36.85 | humidity | 80.0 | 1440 | > th | dose dependent | sin | 2 | NA |
| 532 | 36.86 | wind | 1.0 | 720 | > th | dose dependent | rect. | 12 | 1 |
| 549 | 36.87 | humidity | 80.0 | 270 | < th | dose independent | rect. | 11 | 20 |
| 577 | 36.89 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 587 | 36.89 | wind | 1.0 | 720 | > th | dose independent | rect. | 5 | 19 |
| 597 | 36.89 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 16 | 18 |
| 608 | 36.90 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 20 | 5 |
| 639 | 36.92 | humidity | 80.0 | 270 | < th | dose independent | rect. | 11 | 6 |
| 640 | 36.92 | wind | 5.0 | 4320 | > th | dose independent | rect. | 16 | 8 |
| 641 | 36.92 | temperature | 15.0 | 720 | > th | dose independent | rect. | 5 | 8 |
| 651 | 36.92 | wind | 3.0 | 90 | > th | dose dependent | rect. | 12 | 7 |
| 661 | 36.93 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 19 | 13 |
| 676 | 36.93 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 16 | 13 |
| 682 | 36.94 | humidity | 80.0 | 1440 | < th | dose independent | no | NA | NA |
| 687 | 36.94 | wind | 5.0 | 4320 | < th | dose independent | rect. | 16 | 13 |
| 700 | 36.94 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 17 | 19 |
| 723 | 36.96 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 18 | 4 |
| 728 | 36.96 | temperature | 25.0 | 270 | > th | dose independent | rect. | 22 | 10 |
| 738 | 36.96 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 5 | 23 |
| 751 | 36.96 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 18 | 21 |
| 752 | 36.97 | wind | 3.0 | 720 | > th | dose independent | rect. | 12 | 1 |
| 763 | 36.97 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 3 | 23 |
| 767 | 36.97 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 20 | 8 |
| 769 | 36.97 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 21 | 10 |
| 771 | 36.98 | humidity | 80.0 | 720 | > th | dose independent | no | NA | NA |
| 774 | 36.98 | wind | 7.0 | 4320 | > th | dose independent | rect. | 20 | 8 |
| 795 | 36.99 | wind | 5.0 | 4320 | > th | dose independent | sin | 14 | NA |
| 797 | 36.99 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 798 | 36.99 | temperature | 25.0 | 270 | > th | dose independent | rect. | 22 | 8 |
| 799 | 36.99 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 13 | 9 |
| 813 | 36.99 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 1 | 23 |
| 816 | 36.99 | radiation | 20.0 | 90 | < th | dose dependent | sin | 13 | NA |
| 822 | 37.00 | radiation | 10.0 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 854 | 37.01 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 3 | 23 |
| 863 | 37.01 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 14 | 15 |
| 878 | 37.02 | temperature | 15.0 | 720 | > th | dose independent | rect. | 1 | 16 |
| 894 | 37.02 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 9 | 12 |
| 903 | 37.03 | wind | 9.0 | 4320 | < th | dose independent | sin | 13 | NA |
| 910 | 37.03 | wind | 9.0 | 4320 | < th | dose independent | rect. | 15 | 14 |
| 931 | 37.03 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 22 |
| 956 | 37.04 | radiation | 10.0 | 30 | > th | dose dependent | rect. | 16 | 15 |
| 959 | 37.05 | wind | 5.0 | 90 | > th | dose independent | sin | 17 | NA |
| 960 | 37.05 | wind | 7.0 | 4320 | > th | dose independent | rect. | 20 | 4 |
| 964 | 37.05 | wind | 5.0 | 4320 | < th | dose independent | rect. | 16 | 8 |
| 982 | 37.05 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 17 | 7 |
| 993 | 37.06 | radiation | 10.0 | 90 | > th | dose independent | sin | 13 | NA |
| 999 | 37.06 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 9 | 11 |