Os10g0572100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function UPF0005 family protein.
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Os10g0572100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function UPF0005 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 172.26 | 0.617 | 7.38 | -1.75 | 3.08 | 1.62 | 0.805 | 0.39 | -0.515 | 7.48 | 27.02 | 1146 | -- | -- |
| 172.26 | 0.611 | 7.39 | -1.83 | 3.09 | 1.66 | 0.802 | -- | -0.54 | 7.48 | 26.95 | 1142 | -- | -- |
| 174.02 | 0.614 | 7.39 | -1.8 | 3.08 | 1.65 | -- | 0.0856 | -0.548 | 7.48 | 26.85 | 1148 | -- | -- |
| 173.99 | 0.614 | 7.39 | -1.82 | 3.09 | 1.68 | -- | -- | -0.555 | 7.5 | 26.7 | 1146 | -- | -- |
| 642.46 | 1.18 | 7.47 | -1.69 | -- | 1.52 | -- | 0.507 | -0.598 | -- | 25.6 | 1362 | -- | -- |
| 276.61 | 0.78 | 7.39 | -1.36 | 3 | -- | 0.824 | -- | -0.536 | 7.09 | -- | -- | -- | -- |
| 278.39 | 0.781 | 7.4 | -1.34 | 3 | -- | -- | -- | -0.537 | 7.1 | -- | -- | -- | -- |
| 640.22 | 1.18 | 7.52 | -1.89 | -- | 1.71 | -- | -- | -0.754 | -- | 24.11 | 1360 | -- | -- |
| 253.79 | 0.742 | 7.33 | -- | 3.04 | 1.29 | -- | -- | -0.246 | 7.43 | 28.3 | 1126 | -- | -- |
| 753.26 | 1.28 | 7.46 | -1.28 | -- | -- | -- | -- | -0.484 | -- | -- | -- | -- | -- |
| 325.86 | 0.844 | 7.36 | -- | 2.99 | -- | -- | -- | -0.388 | 7.13 | -- | -- | -- | -- |
| 723.84 | 1.25 | 7.42 | -- | -- | 1.21 | -- | -- | -0.286 | -- | 27.08 | 1366 | -- | -- |
| 796.77 | 1.32 | 7.43 | -- | -- | -- | -- | -- | -0.341 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 173.74 | temperature | 25 | 1440 | > th | dose dependent | rect. | 17 | 2 |
| 19 | 176.51 | temperature | 25 | 1440 | > th | dose dependent | rect. | 10 | 11 |
| 21 | 176.53 | temperature | 25 | 1440 | > th | dose dependent | sin | 18 | NA |
| 84 | 177.35 | temperature | 25 | 1440 | > th | dose dependent | rect. | 10 | 22 |
| 116 | 177.54 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 20 |
| 214 | 177.93 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 258 | 178.70 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 12 |
| 283 | 179.44 | temperature | 15 | 270 | > th | dose dependent | rect. | 10 | 19 |
| 354 | 182.24 | temperature | 10 | 270 | > th | dose dependent | rect. | 24 | 16 |
| 357 | 182.29 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 3 |
| 368 | 182.55 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 7 |
| 377 | 182.74 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 3 |
| 390 | 182.97 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 22 |
| 396 | 183.03 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 12 |
| 436 | 183.27 | temperature | 30 | 1440 | < th | dose independent | rect. | 19 | 21 |
| 440 | 183.29 | temperature | 30 | 1440 | > th | dose independent | rect. | 14 | 22 |
| 442 | 183.30 | temperature | 30 | 1440 | < th | dose independent | rect. | 7 | 9 |
| 448 | 183.33 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 454 | 183.37 | temperature | 30 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 486 | 183.51 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 7 |
| 512 | 183.63 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 6 |
| 555 | 183.88 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 3 |
| 571 | 184.05 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 15 |
| 596 | 184.09 | temperature | 30 | 1440 | > th | dose independent | rect. | 14 | 3 |
| 597 | 184.09 | temperature | 30 | 1440 | < th | dose independent | rect. | 5 | 7 |
| 611 | 184.16 | temperature | 30 | 1440 | < th | dose independent | sin | 1 | NA |
| 641 | 184.25 | temperature | 30 | 1440 | < th | dose independent | rect. | 19 | 17 |
| 936 | 184.62 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 999 | 184.78 | temperature | 30 | 1440 | > th | dose independent | sin | 1 | NA |