Os10g0571300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Protein kinase-like protein.
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Os10g0571300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Protein kinase-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 300.67 | 0.815 | 5.16 | -1.22 | 1.76 | 1.27 | 0.838 | -1.7 | -1.02 | 20.6 | 90 | 10 | -- | -- |
| 305.63 | 0.814 | 5.16 | -1.18 | 1.74 | 1.25 | 1.29 | -- | -1.02 | 20.7 | 90.97 | 12 | -- | -- |
| 302.67 | 0.817 | 5.16 | -1.25 | 1.77 | 1.32 | -- | -2.16 | -1.02 | 20.6 | 89.55 | 9 | -- | -- |
| 310.87 | 0.821 | 5.16 | -1.23 | 1.72 | 1.2 | -- | -- | -1.03 | 20.6 | 91 | 21 | -- | -- |
| 368.9 | 0.895 | 5.13 | -1.38 | -- | 2.38 | -- | -1.62 | -1.12 | -- | 180.9 | 555 | -- | -- |
| 327.72 | 0.849 | 5.16 | -1.17 | 1.82 | -- | 0.976 | -- | -1.02 | 19.3 | -- | -- | -- | -- |
| 330.18 | 0.851 | 5.15 | -1.19 | 1.82 | -- | -- | -- | -1.02 | 19.2 | -- | -- | -- | -- |
| 370.68 | 0.897 | 5.12 | -1.28 | -- | 2.27 | -- | -- | -1.08 | -- | 95.79 | 575 | -- | -- |
| 349.93 | 0.871 | 5.13 | -- | 1.68 | 1.11 | -- | -- | -0.889 | 20.5 | 91.99 | 48 | -- | -- |
| 506.11 | 1.05 | 5.11 | -1.23 | -- | -- | -- | -- | -1.05 | -- | -- | -- | -- | -- |
| 367.65 | 0.897 | 5.12 | -- | 1.83 | -- | -- | -- | -0.885 | 19.2 | -- | -- | -- | -- |
| 414.15 | 0.948 | 5.09 | -- | -- | 2.23 | -- | -- | -0.944 | -- | 102.4 | 564 | -- | -- |
| 545.7 | 1.09 | 5.08 | -- | -- | -- | -- | -- | -0.914 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 293.82 | humidity | 90 | 10 | < th | dose dependent | rect. | 7 | 11 |
| 9 | 295.54 | humidity | 90 | 30 | < th | dose dependent | rect. | 3 | 15 |
| 19 | 295.98 | humidity | 80 | 30 | < th | dose independent | rect. | 8 | 10 |
| 31 | 296.89 | humidity | 90 | 30 | < th | dose dependent | rect. | 24 | 18 |
| 32 | 296.90 | humidity | 90 | 10 | < th | dose dependent | sin | 22 | NA |
| 41 | 297.19 | humidity | 90 | 10 | < th | dose dependent | rect. | 7 | 18 |
| 42 | 297.28 | humidity | 90 | 10 | < th | dose dependent | rect. | 7 | 16 |
| 51 | 297.47 | humidity | 90 | 30 | < th | dose dependent | rect. | 22 | 20 |
| 78 | 298.07 | humidity | 90 | 30 | < th | dose dependent | rect. | 20 | 22 |
| 87 | 298.26 | humidity | 80 | 10 | > th | dose dependent | rect. | 6 | 12 |
| 126 | 298.65 | humidity | 80 | 10 | < th | dose independent | sin | 22 | NA |
| 128 | 298.66 | humidity | 90 | 10 | < th | dose dependent | rect. | 7 | 21 |
| 155 | 299.01 | humidity | 80 | 10 | > th | dose dependent | rect. | 8 | 10 |
| 160 | 299.11 | humidity | 90 | 10 | < th | dose dependent | rect. | 3 | 22 |
| 174 | 299.22 | humidity | 90 | 10 | < th | dose dependent | rect. | 3 | 20 |
| 245 | 300.02 | humidity | 80 | 10 | > th | dose dependent | sin | 21 | NA |
| 274 | 300.25 | humidity | 90 | 10 | < th | dose dependent | rect. | 24 | 23 |
| 310 | 300.68 | humidity | 90 | 10 | < th | dose dependent | no | NA | NA |
| 388 | 300.99 | humidity | 60 | 10 | > th | dose dependent | sin | 22 | NA |
| 443 | 301.34 | humidity | 90 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 453 | 301.42 | humidity | 60 | 90 | > th | dose dependent | rect. | 4 | 23 |
| 473 | 301.57 | radiation | 10 | 90 | > th | dose independent | no | NA | NA |
| 474 | 301.57 | radiation | 10 | 90 | > th | dose independent | rect. | 6 | 12 |
| 597 | 301.89 | radiation | 20 | 90 | < th | dose dependent | rect. | 4 | 23 |
| 642 | 302.10 | radiation | 10 | 90 | > th | dose independent | rect. | 13 | 23 |
| 670 | 302.22 | humidity | 60 | 10 | > th | dose dependent | no | NA | NA |
| 678 | 302.25 | humidity | 80 | 10 | > th | dose independent | rect. | 7 | 11 |
| 704 | 302.36 | humidity | 60 | 90 | > th | dose dependent | rect. | 17 | 23 |
| 719 | 302.44 | humidity | 60 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 720 | 302.44 | humidity | 90 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 779 | 302.75 | humidity | 60 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 782 | 302.78 | humidity | 60 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 792 | 302.86 | humidity | 80 | 10 | > th | dose independent | sin | 22 | NA |
| 807 | 302.92 | humidity | 60 | 10 | > th | dose dependent | rect. | 4 | 23 |
| 809 | 302.93 | humidity | 60 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 824 | 302.99 | humidity | 60 | 30 | > th | dose dependent | rect. | 15 | 23 |
| 883 | 303.27 | humidity | 60 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 885 | 303.29 | humidity | 60 | 10 | > th | dose dependent | rect. | 19 | 23 |
| 900 | 303.40 | humidity | 70 | 90 | > th | dose independent | rect. | 9 | 23 |
| 932 | 303.52 | humidity | 60 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 934 | 303.55 | humidity | 70 | 90 | > th | dose independent | rect. | 5 | 13 |
| 937 | 303.55 | humidity | 90 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 946 | 303.63 | radiation | 10 | 90 | > th | dose independent | sin | 23 | NA |
| 951 | 303.67 | humidity | 90 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 967 | 303.76 | humidity | 70 | 90 | > th | dose independent | rect. | 18 | 23 |