Os10g0570200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to RIR1b protein precursor.
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Os10g0570200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to RIR1b protein precursor.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 422.5 | 0.966 | 10.6 | 4.81 | 2.09 | 1.57 | -0.00628 | 6.61 | 1.55 | 20.1 | 1044 | 13256 | -- | -- |
| 470.19 | 1.01 | 10.7 | 3.71 | 2.17 | 1.99 | -0.311 | -- | 1.45 | 20.1 | 1011 | 11737 | -- | -- |
| 422.5 | 0.957 | 10.6 | 4.81 | 2.09 | 1.57 | -- | 6.61 | 1.55 | 20.1 | 1073 | 13255 | -- | -- |
| 469.8 | 1.01 | 10.6 | 3.67 | 2.18 | 2.06 | -- | -- | 1.44 | 20.1 | 1011 | 11742 | -- | -- |
| 661.3 | 1.2 | 10.5 | 4.83 | -- | 1.54 | -- | 6.79 | 1.53 | -- | 1070 | 13543 | -- | -- |
| 561.05 | 1.11 | 10.7 | 4.1 | 2.1 | -- | 0.0378 | -- | 1.37 | 20.1 | -- | -- | -- | -- |
| 561.06 | 1.11 | 10.7 | 4.1 | 2.1 | -- | -- | -- | 1.37 | 20.1 | -- | -- | -- | -- |
| 713.69 | 1.24 | 10.6 | 3.68 | -- | 2.2 | -- | -- | 1.44 | -- | 1011 | 12084 | -- | -- |
| 545.25 | 1.09 | 10.9 | -- | 2.1 | 4.08 | -- | -- | 0.229 | 20 | 1061 | 47520 | -- | -- |
| 803.44 | 1.32 | 10.6 | 4.08 | -- | -- | -- | -- | 1.35 | -- | -- | -- | -- | -- |
| 1003.77 | 1.48 | 10.8 | -- | 2.08 | -- | -- | -- | 0.916 | 20.2 | -- | -- | -- | -- |
| 787.11 | 1.31 | 10.9 | -- | -- | 4.07 | -- | -- | 0.207 | -- | 1073 | 47520 | -- | -- |
| 1242.47 | 1.65 | 10.7 | -- | -- | -- | -- | -- | 0.894 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 411.40 | atmosphere | 1000 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 2 | 412.24 | wind | 7 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 19 | 415.66 | atmosphere | 1000 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 27 | 416.54 | atmosphere | 1000 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 33 | 417.01 | wind | 3 | 14400 | > th | dose dependent | rect. | 17 | 2 |
| 43 | 417.46 | atmosphere | 1000 | 14400 | > th | dose independent | rect. | 16 | 13 |
| 44 | 417.47 | atmosphere | 1000 | 14400 | > th | dose independent | rect. | 14 | 15 |
| 47 | 417.56 | atmosphere | 1000 | 14400 | < th | dose independent | rect. | 16 | 13 |
| 50 | 417.58 | atmosphere | 1000 | 14400 | < th | dose independent | rect. | 14 | 15 |
| 63 | 417.78 | atmosphere | 1000 | 14400 | > th | dose independent | rect. | 14 | 12 |
| 65 | 417.79 | atmosphere | 1000 | 14400 | < th | dose independent | rect. | 14 | 12 |
| 66 | 417.81 | atmosphere | 1000 | 14400 | < th | dose independent | rect. | 16 | 9 |
| 76 | 417.86 | atmosphere | 1000 | 14400 | > th | dose independent | rect. | 16 | 9 |
| 120 | 418.13 | atmosphere | 1000 | 14400 | > th | dose independent | sin | 14 | NA |
| 135 | 418.21 | atmosphere | 1000 | 14400 | < th | dose independent | sin | 14 | NA |
| 185 | 418.63 | wind | 7 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 202 | 418.75 | wind | 7 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 248 | 419.10 | atmosphere | 1000 | 14400 | > th | dose independent | rect. | 21 | 8 |
| 249 | 419.10 | atmosphere | 1000 | 14400 | < th | dose dependent | sin | 18 | NA |
| 271 | 419.28 | atmosphere | 1000 | 14400 | < th | dose independent | rect. | 21 | 8 |
| 495 | 420.71 | atmosphere | 1000 | 14400 | > th | dose independent | rect. | 22 | 4 |
| 498 | 420.72 | atmosphere | 1000 | 14400 | > th | dose independent | rect. | 23 | 2 |
| 505 | 420.77 | atmosphere | 1000 | 14400 | < th | dose independent | rect. | 23 | 3 |
| 512 | 420.78 | atmosphere | 1000 | 14400 | > th | dose independent | no | NA | NA |
| 521 | 420.81 | atmosphere | 1000 | 14400 | > th | dose independent | rect. | 4 | 23 |
| 526 | 420.82 | atmosphere | 1000 | 14400 | > th | dose independent | rect. | 20 | 23 |
| 592 | 421.06 | atmosphere | 1000 | 14400 | < th | dose independent | rect. | 4 | 23 |
| 597 | 421.09 | atmosphere | 1000 | 14400 | < th | dose independent | no | NA | NA |
| 599 | 421.09 | atmosphere | 1000 | 14400 | > th | dose independent | rect. | 23 | 23 |
| 613 | 421.13 | atmosphere | 1000 | 14400 | < th | dose independent | rect. | 20 | 23 |
| 749 | 421.72 | atmosphere | 1015 | 14400 | < th | dose dependent | rect. | 6 | 4 |
| 755 | 421.76 | atmosphere | 1000 | 14400 | > th | dose dependent | rect. | 3 | 2 |
| 770 | 421.80 | atmosphere | 1015 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 778 | 421.84 | atmosphere | 1000 | 14400 | > th | dose dependent | rect. | 3 | 7 |
| 841 | 422.06 | atmosphere | 1000 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 887 | 422.19 | atmosphere | 1000 | 14400 | > th | dose dependent | rect. | 23 | 11 |