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Os10g0569400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : RIR1a protein precursor.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.3 (0.0601) R2 : 0.344
β1 : 2.35 (0.218) R2dD : 0.247 R2D : 0.00215
β2 : 0.528 (0.128) R2dC : 0.0268 R2C : 0.00768
β3 : 4.13 (0.338) R2dE : 0.63 R2E : -0.5
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 10.6 (1.1) R2dD*E : 0.389 R2D*E : -0.147
γ1 : 0.403 (0.116) R2dN8 : 0.0294 R2N8 : -0.0542
σ : 0.94
deviance : 407.64
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C
peak time of C : 4.01
E
wheather : wind
threshold : 5.271
memory length : 5835
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 8.03
open length of G : 1.1

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
406.66 0.947 12.3 2.4 0.538 4.1 0.936 10.5 0.429 3.65 5.272 5834 8.03 1.05
504.95 1.05 12 2.71 0.585 3.63 1.24 -- 0.62 3.23 6.751 6650 7.98 0.971
407.64 0.94 12.3 2.35 0.528 4.13 -- 10.6 0.403 4.01 5.271 5835 8.03 1.1
482.76 1.02 12 2.06 0.512 2.57 -- -- 0.457 3.66 6.7 5958 8.02 0.95
423.94 0.959 12.3 2.4 -- 4.19 -- 10.7 0.416 -- 5.3 5833 8.02 1.12
552.8 1.1 12 1.36 0.527 -- 0.767 -- 0.275 3.81 -- -- -- --
554.3 1.1 12 1.35 0.541 -- -- -- 0.27 4.26 -- -- -- --
496.44 1.04 12.1 1.79 -- 3.01 -- -- 0.331 -- 5.753 2613 8.12 0.867
558.72 1.1 12.1 -- 0.716 2.25 -- -- 0.394 3.13 6.228 3314 7.96 1.01
570.06 1.12 12 1.37 -- -- -- -- 0.285 -- -- -- -- --
602.39 1.15 12.1 -- 0.566 -- -- -- 0.12 4.21 -- -- -- --
560.16 1.1 12 -- -- 2.18 -- -- 0.31 -- 6.2 2949 8.13 0.838
619.75 1.16 12.1 -- -- -- -- -- 0.132 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 373.42 precipitation 0.1 43200 > th dose dependent rect. 17 5
4 376.92 precipitation 0.1 43200 > th dose dependent rect. 20 1
9 380.11 precipitation 0.1 43200 < th dose independent rect. 20 1
10 380.11 precipitation 0.1 43200 < th dose dependent rect. 20 1
11 380.17 wind 9.0 43200 > th dose independent rect. 16 2
12 380.19 precipitation 0.1 43200 > th dose independent rect. 20 1
17 383.38 precipitation 0.1 43200 < th dose independent rect. 17 4
18 383.38 precipitation 0.1 43200 < th dose dependent rect. 17 4
19 383.64 precipitation 0.1 43200 > th dose independent rect. 17 4
20 383.71 wind 9.0 43200 < th dose independent rect. 16 2
21 384.40 precipitation 0.1 43200 > th dose dependent rect. 16 3
27 386.96 wind 7.0 43200 < th dose independent rect. 17 13
29 387.32 wind 7.0 43200 > th dose independent rect. 17 13
32 387.82 precipitation 0.1 43200 > th dose dependent rect. 19 3
48 390.51 precipitation 0.1 43200 < th dose independent rect. 17 2
49 390.51 precipitation 0.1 43200 < th dose dependent rect. 17 2
51 390.57 precipitation 0.1 43200 > th dose independent rect. 17 2
70 392.47 wind 7.0 43200 > th dose dependent rect. 16 14
95 395.04 precipitation 0.1 43200 < th dose independent rect. 17 7
96 395.04 precipitation 0.1 43200 < th dose dependent rect. 17 7
97 395.10 radiation 10.0 43200 > th dose independent rect. 7 2
98 395.23 precipitation 0.1 43200 > th dose independent rect. 17 7
122 396.15 precipitation 0.1 43200 > th dose dependent sin 17 NA
150 397.60 wind 7.0 43200 < th dose independent sin 12 NA
154 397.85 wind 7.0 43200 > th dose independent sin 12 NA
158 398.30 wind 9.0 43200 < th dose independent rect. 16 8
199 400.58 radiation 10.0 43200 > th dose independent rect. 5 5
212 400.60 precipitation 0.1 43200 > th dose independent rect. 19 3
268 402.48 wind 7.0 43200 > th dose independent rect. 17 7
275 402.64 wind 7.0 43200 > th dose dependent sin 12 NA
276 402.70 radiation 20.0 43200 < th dose dependent rect. 8 3
315 403.95 precipitation 0.1 43200 < th dose independent rect. 19 5
316 403.95 precipitation 0.1 43200 < th dose dependent rect. 19 5
325 404.21 precipitation 0.1 43200 > th dose independent rect. 19 5
330 404.43 radiation 10.0 43200 > th dose independent sin 9 NA
389 406.55 radiation 10.0 43200 < th dose independent rect. 10 1
402 407.01 atmosphere 1005.0 43200 < th dose dependent rect. 15 2
420 407.28 wind 9.0 43200 > th dose dependent rect. 15 3
424 407.36 wind 7.0 43200 > th dose independent rect. 19 1
437 407.72 wind 7.0 43200 > th dose dependent rect. 16 8
593 411.22 wind 1.0 14400 < th dose independent rect. 20 1
608 411.61 wind 1.0 14400 > th dose independent rect. 20 1
633 412.11 atmosphere 1005.0 43200 < th dose dependent rect. 14 14
644 412.29 atmosphere 1005.0 43200 < th dose dependent rect. 3 1
686 412.77 wind 7.0 43200 > th dose independent rect. 17 22
755 413.69 atmosphere 1005.0 43200 < th dose dependent sin 15 NA
772 413.98 wind 1.0 14400 < th dose dependent rect. 19 7
806 414.46 wind 7.0 43200 > th dose dependent rect. 17 1
845 414.88 wind 7.0 43200 > th dose dependent rect. 15 21
917 415.73 precipitation 0.1 43200 < th dose independent sin 17 NA
919 415.73 precipitation 0.1 43200 < th dose dependent sin 17 NA
935 415.85 precipitation 0.1 43200 > th dose independent sin 17 NA
979 416.34 wind 5.0 43200 < th dose independent rect. 21 3