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Os10g0569300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF248, methyltransferase putative family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.19 (0.0204) R2 : 0.0314
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.165 (0.043) R2dN8 : 0.0405 R2N8 : 0.0314
σ : 0.384
deviance : 67.83
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
49.11 0.329 7.19 0.0311 0.0891 -0.395 -0.883 0.382 -0.179 5.26 2.311 40 -- --
49.74 0.328 7.2 0.043 0.0685 -0.385 -0.849 -- -0.18 5.69 2.439 40 -- --
50.91 0.332 7.19 0.0181 0.121 -0.45 -- 0.302 -0.182 3.1 2.954 45 -- --
51.36 0.334 7.19 0.0303 0.158 -0.477 -- -- -0.182 2.64 2.539 48 -- --
51.38 0.334 7.19 0.0334 -- -0.388 -- 0.296 -0.172 -- 2.18 40 -- --
54.72 0.347 7.17 0.0689 0.442 -- -0.434 -- -0.156 10.9 -- -- -- --
55.43 0.349 7.17 0.0527 0.444 -- -- -- -0.156 11.2 -- -- -- --
51.29 0.334 7.19 0.0296 -- -0.391 -- -- -0.155 -- 0.12 36 -- --
51.38 0.334 7.19 -- 0.158 -0.478 -- -- -0.182 2.5 2.142 48 -- --
67.78 0.385 7.18 0.0417 -- -- -- -- -0.16 -- -- -- -- --
55.5 0.348 7.18 -- 0.444 -- -- -- -0.162 11.2 -- -- -- --
51.15 0.333 7.19 -- -- -0.389 -- -- -0.16 -- 1.583e-05 33 -- --
67.83 0.384 7.19 -- -- -- -- -- -0.165 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 47.06 radiation 10.0 1440 < th dose independent rect. 19 10
2 47.20 radiation 20.0 14400 < th dose independent rect. 19 11
3 47.23 humidity 70.0 30 > th dose independent rect. 18 11
4 47.25 radiation 40.0 4320 < th dose dependent rect. 19 10
11 47.86 temperature 30.0 90 < th dose independent rect. 17 12
13 48.01 wind 7.0 720 < th dose independent rect. 17 2
15 48.05 radiation 1.0 30 < th dose dependent rect. 18 14
21 48.09 radiation 1.0 30 < th dose independent rect. 18 14
38 48.23 humidity 70.0 14400 > th dose independent rect. 22 8
52 48.34 temperature 20.0 30 > th dose independent rect. 5 13
53 48.36 humidity 60.0 14400 > th dose independent rect. 20 9
57 48.38 wind 9.0 720 < th dose dependent rect. 17 2
67 48.42 radiation 10.0 4320 < th dose independent rect. 23 6
68 48.42 wind 9.0 720 < th dose dependent rect. 5 2
89 48.62 humidity 70.0 30 > th dose independent rect. 13 16
101 48.74 wind 5.0 30 < th dose independent rect. 18 11
107 48.77 precipitation 0.1 30 < th dose independent rect. 18 11
108 48.77 precipitation 0.1 30 < th dose dependent rect. 18 11
121 48.80 radiation 1.0 30 > th dose independent rect. 11 23
145 48.88 radiation 10.0 90 < th dose dependent rect. 7 22
160 48.90 radiation 1.0 30 < th dose dependent rect. 1 23
161 48.91 wind 5.0 720 < th dose independent rect. 5 2
162 48.91 precipitation 0.1 720 < th dose independent rect. 7 7
164 48.91 precipitation 0.1 720 < th dose independent rect. 7 22
165 48.91 precipitation 0.1 720 < th dose dependent rect. 7 7
166 48.91 humidity 50.0 30 > th dose dependent rect. 18 11
171 48.91 precipitation 0.1 720 < th dose dependent rect. 7 22
188 48.94 wind 9.0 30 < th dose independent rect. 18 11
194 48.96 temperature 10.0 30 > th dose independent rect. 18 11
196 48.96 atmosphere 995.0 30 > th dose independent rect. 18 11
197 48.96 radiation 20.0 30 < th dose independent rect. 18 11
200 48.96 temperature 10.0 30 > th dose independent rect. 5 13
202 48.96 atmosphere 1015.0 30 < th dose independent rect. 5 13
219 49.00 temperature 10.0 1440 > th dose independent rect. 19 11
222 49.00 temperature 30.0 1440 < th dose independent rect. 19 11
226 49.00 humidity 50.0 1440 > th dose independent rect. 19 11
228 49.00 atmosphere 995.0 1440 > th dose independent rect. 19 11
239 49.00 temperature 10.0 1440 > th dose independent rect. 6 13
243 49.01 wind 9.0 30 < th dose independent rect. 5 13
244 49.02 temperature 10.0 720 > th dose independent rect. 7 7
245 49.02 atmosphere 995.0 720 > th dose independent rect. 7 7
246 49.02 atmosphere 1015.0 720 < th dose independent rect. 7 7
247 49.02 temperature 10.0 720 > th dose independent rect. 14 17
255 49.05 wind 1.0 720 > th dose independent rect. 17 2
257 49.06 temperature 10.0 720 > th dose independent rect. 19 7
258 49.06 temperature 30.0 720 < th dose independent rect. 19 7
259 49.06 humidity 50.0 720 > th dose independent rect. 19 7
260 49.06 atmosphere 995.0 720 > th dose independent rect. 19 7
261 49.06 radiation 1.0 720 < th dose independent rect. 19 7
270 49.06 temperature 10.0 720 > th dose independent rect. 2 17
271 49.06 radiation 1.0 720 < th dose dependent rect. 19 7
277 49.07 humidity 50.0 720 > th dose independent rect. 17 2
285 49.09 wind 9.0 720 < th dose independent rect. 19 7
290 49.09 radiation 1.0 30 < th dose dependent rect. 3 23
291 49.10 precipitation 0.1 30 < th dose independent rect. 5 13
292 49.10 precipitation 0.1 30 < th dose dependent rect. 5 13
293 49.11 humidity 60.0 270 > th dose independent rect. 7 12
298 49.12 radiation 30.0 4320 < th dose dependent rect. 23 6
304 49.14 radiation 1.0 30 < th dose dependent rect. 21 23
305 49.15 precipitation 0.1 720 < th dose independent rect. 17 2
306 49.15 precipitation 0.1 720 < th dose dependent rect. 17 2
311 49.17 precipitation 0.1 720 < th dose independent rect. 2 17
313 49.17 precipitation 0.1 720 < th dose dependent rect. 2 17
317 49.19 temperature 10.0 720 > th dose independent rect. 5 2
318 49.19 temperature 30.0 720 < th dose independent rect. 5 2
319 49.19 humidity 50.0 720 > th dose independent rect. 5 2
321 49.19 atmosphere 995.0 720 > th dose independent rect. 5 2
322 49.19 atmosphere 1015.0 720 < th dose independent rect. 5 2
323 49.19 radiation 40.0 720 < th dose independent rect. 5 2
324 49.19 radiation 10.0 720 < th dose independent rect. 17 2
325 49.19 precipitation 0.1 720 < th dose independent rect. 5 2
326 49.19 temperature 10.0 720 > th dose independent rect. 7 22
327 49.19 precipitation 0.1 720 < th dose dependent rect. 5 2
331 49.20 humidity 50.0 720 > th dose dependent rect. 5 2
335 49.21 radiation 1.0 30 < th dose independent rect. 1 23
337 49.22 humidity 50.0 720 > th dose independent rect. 7 7
341 49.24 temperature 10.0 720 > th dose independent rect. 17 2
342 49.24 atmosphere 1015.0 720 < th dose independent rect. 17 2
343 49.24 radiation 30.0 720 < th dose independent rect. 17 2
350 49.24 temperature 10.0 720 > th dose independent rect. 19 22
351 49.24 radiation 40.0 720 < th dose dependent rect. 17 2
430 49.30 temperature 10.0 720 > th dose dependent rect. 5 2
447 49.31 radiation 1.0 30 < th dose dependent no NA NA
463 49.32 radiation 10.0 90 < th dose independent rect. 7 22
472 49.34 radiation 1.0 30 < th dose independent sin 11 NA
474 49.34 wind 9.0 720 < th dose independent rect. 7 22
487 49.35 temperature 10.0 30 > th dose dependent rect. 5 13
500 49.37 radiation 10.0 30 < th dose dependent sin 10 NA
504 49.38 atmosphere 1015.0 30 < th dose independent rect. 18 11
506 49.38 wind 9.0 30 < th dose dependent rect. 18 11
521 49.40 radiation 30.0 90 < th dose dependent rect. 9 20
528 49.41 radiation 1.0 30 < th dose independent rect. 3 23
542 49.42 humidity 60.0 90 > th dose independent rect. 9 20
545 49.43 temperature 10.0 720 > th dose independent rect. 11 8
546 49.43 atmosphere 1015.0 720 < th dose independent rect. 11 8
549 49.43 temperature 10.0 720 > th dose independent rect. 19 16
550 49.43 atmosphere 995.0 720 > th dose independent rect. 19 16
555 49.44 radiation 1.0 30 < th dose independent rect. 21 23
573 49.48 radiation 30.0 14400 < th dose independent rect. 17 3
575 49.49 wind 9.0 720 < th dose independent rect. 7 7
580 49.50 wind 9.0 720 < th dose independent rect. 19 16
602 49.53 humidity 60.0 90 > th dose independent rect. 9 14
618 49.54 radiation 1.0 30 > th dose independent no NA NA
620 49.54 radiation 1.0 30 < th dose independent no NA NA
621 49.54 temperature 25.0 30 > th dose independent rect. 18 6
623 49.54 radiation 1.0 30 > th dose independent rect. 5 14
698 49.56 wind 9.0 720 < th dose independent rect. 23 8
699 49.56 temperature 10.0 720 > th dose independent rect. 23 8
700 49.56 temperature 30.0 720 < th dose independent rect. 23 8
701 49.56 humidity 50.0 720 > th dose independent rect. 23 8
703 49.56 atmosphere 995.0 720 > th dose independent rect. 23 8
704 49.56 radiation 40.0 720 < th dose independent rect. 23 8
705 49.56 temperature 10.0 720 > th dose independent rect. 7 16
733 49.58 precipitation 0.1 720 < th dose independent rect. 19 7
753 49.58 precipitation 0.1 720 < th dose dependent rect. 19 7
791 49.61 wind 1.0 43200 < th dose independent rect. 20 3
792 49.61 radiation 40.0 14400 < th dose independent rect. 16 7
828 49.65 atmosphere 995.0 30 > th dose independent rect. 5 13
840 49.67 humidity 50.0 720 > th dose independent rect. 19 16
858 49.68 temperature 10.0 30 > th dose dependent rect. 5 17
869 49.69 atmosphere 995.0 720 > th dose independent rect. 17 2
871 49.69 precipitation 0.1 720 < th dose independent rect. 7 12
878 49.69 precipitation 0.1 720 < th dose dependent rect. 7 12
892 49.71 temperature 20.0 30 > th dose independent rect. 5 17
905 49.72 radiation 30.0 4320 < th dose independent rect. 10 1
906 49.72 wind 1.0 43200 > th dose independent rect. 19 4
908 49.72 wind 1.0 90 > th dose independent rect. 18 11
913 49.72 humidity 60.0 270 > th dose independent rect. 7 21
914 49.73 wind 1.0 43200 < th dose independent rect. 19 5
938 49.77 temperature 25.0 270 > th dose dependent rect. 15 19
941 49.78 precipitation 0.1 720 < th dose independent rect. 9 10
950 49.78 precipitation 0.1 720 < th dose dependent rect. 9 10
953 49.79 temperature 30.0 720 < th dose independent rect. 7 6
963 49.81 temperature 30.0 270 < th dose independent rect. 7 12
981 49.84 precipitation 0.1 720 < th dose independent rect. 19 22
991 49.84 precipitation 0.1 720 < th dose dependent rect. 19 22
999 49.86 wind 5.0 90 < th dose independent rect. 15 14