Os10g0569100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : PIG-P domain containing protein.
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Os10g0569100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : PIG-P domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 222.47 | 0.701 | 5.59 | -0.153 | 0.703 | -1.95 | 0.486 | 2.22 | -0.271 | 2.67 | 25.4 | 5576 | -- | -- |
| 217.61 | 0.687 | 5.59 | -0.502 | 0.746 | -1.93 | 0.722 | -- | -0.0517 | 2.84 | 24.19 | 9804 | -- | -- |
| 219.3 | 0.69 | 5.54 | -0.175 | 0.702 | -1.77 | -- | 1.68 | -0.179 | 2.43 | 25 | 8386 | -- | -- |
| 217.53 | 0.687 | 5.58 | -0.453 | 0.642 | -1.86 | -- | -- | -0.0212 | 2.44 | 23.6 | 9262 | -- | -- |
| 241.18 | 0.723 | 5.54 | -0.157 | -- | -1.79 | -- | 1.44 | 0.00356 | -- | 24.56 | 9020 | -- | -- |
| 326.44 | 0.847 | 5.76 | -1.58 | 0.564 | -- | 0.754 | -- | -0.837 | 3.44 | -- | -- | -- | -- |
| 327.53 | 0.848 | 5.76 | -1.59 | 0.568 | -- | -- | -- | -0.841 | 2.71 | -- | -- | -- | -- |
| 241.6 | 0.724 | 5.56 | -0.458 | -- | -1.87 | -- | -- | 0.0143 | -- | 23.4 | 8993 | -- | -- |
| 221.82 | 0.694 | 5.58 | -- | 0.625 | -2.06 | -- | -- | 0.113 | 2.4 | 22.9 | 10622 | -- | -- |
| 346.3 | 0.87 | 5.76 | -1.57 | -- | -- | -- | -- | -0.826 | -- | -- | -- | -- | -- |
| 394.19 | 0.929 | 5.72 | -- | 0.537 | -- | -- | -- | -0.664 | 2.68 | -- | -- | -- | -- |
| 244.9 | 0.729 | 5.54 | -- | -- | -2.1 | -- | -- | 0.143 | -- | 22.84 | 10582 | -- | -- |
| 411 | 0.946 | 5.72 | -- | -- | -- | -- | -- | -0.653 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 214.43 | temperature | 20 | 4320 | > th | dose dependent | rect. | 7 | 2 |
| 3 | 214.80 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 18 |
| 27 | 217.40 | temperature | 10 | 4320 | > th | dose dependent | rect. | 7 | 2 |
| 30 | 217.58 | temperature | 30 | 4320 | < th | dose dependent | rect. | 7 | 2 |
| 68 | 219.03 | temperature | 20 | 720 | > th | dose dependent | sin | 7 | NA |
| 98 | 219.82 | temperature | 20 | 4320 | > th | dose dependent | sin | 7 | NA |
| 278 | 223.02 | temperature | 20 | 14400 | > th | dose independent | rect. | 16 | 12 |
| 295 | 223.16 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 6 |
| 297 | 223.17 | temperature | 20 | 14400 | > th | dose independent | rect. | 19 | 7 |
| 302 | 223.20 | temperature | 20 | 14400 | > th | dose independent | sin | 14 | NA |
| 316 | 223.31 | temperature | 25 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 326 | 223.32 | temperature | 20 | 270 | > th | dose dependent | rect. | 22 | 23 |
| 349 | 223.48 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 6 |
| 374 | 223.67 | temperature | 20 | 4320 | > th | dose dependent | rect. | 24 | 23 |
| 376 | 223.69 | temperature | 20 | 4320 | > th | dose dependent | no | NA | NA |
| 387 | 223.75 | temperature | 25 | 14400 | > th | dose independent | rect. | 9 | 3 |
| 398 | 223.78 | temperature | 20 | 4320 | > th | dose dependent | rect. | 5 | 23 |
| 407 | 223.81 | temperature | 20 | 14400 | > th | dose dependent | rect. | 17 | 2 |
| 420 | 223.89 | temperature | 20 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 449 | 223.98 | temperature | 20 | 14400 | < th | dose independent | rect. | 17 | 11 |
| 483 | 224.10 | temperature | 20 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 498 | 224.15 | temperature | 20 | 14400 | < th | dose independent | sin | 14 | NA |
| 569 | 224.40 | temperature | 25 | 14400 | < th | dose independent | rect. | 4 | 12 |
| 634 | 224.60 | temperature | 25 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 679 | 224.70 | temperature | 25 | 14400 | > th | dose independent | rect. | 4 | 12 |
| 726 | 224.78 | temperature | 25 | 14400 | < th | dose independent | sin | 1 | NA |
| 733 | 224.79 | temperature | 20 | 4320 | > th | dose dependent | rect. | 19 | 9 |
| 778 | 224.85 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 903 | 225.02 | temperature | 20 | 14400 | > th | dose dependent | sin | 19 | NA |
| 915 | 225.03 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 20 |
| 927 | 225.04 | temperature | 20 | 14400 | < th | dose independent | rect. | 22 | 1 |