Os10g0569000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0569000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 31.07 | 0.262 | 14.2 | -0.54 | 1.63 | 0.77 | -0.315 | -3.45 | -0.18 | 16.9 | 25.5 | 85 | -- | -- |
| 34.69 | 0.274 | 14.1 | -0.153 | 1.64 | 0.484 | -0.778 | -- | -0.0873 | 16.7 | 25.03 | 114 | -- | -- |
| 31.31 | 0.261 | 14.2 | -0.548 | 1.63 | 0.777 | -- | -3.55 | -0.182 | 16.9 | 25.5 | 87 | -- | -- |
| 36.17 | 0.282 | 14.1 | -0.148 | 1.69 | 0.456 | -- | -- | -0.0819 | 16.9 | 25.5 | 87 | -- | -- |
| 112.19 | 0.493 | 14.2 | -0.935 | -- | 2.16 | -- | -3.92 | -0.448 | -- | 24.2 | 250 | -- | -- |
| 38.31 | 0.29 | 14.1 | -0.078 | 1.84 | -- | -0.622 | -- | -0.0521 | 16.7 | -- | -- | -- | -- |
| 39.31 | 0.294 | 14.1 | -0.0815 | 1.84 | -- | -- | -- | -0.0554 | 16.7 | -- | -- | -- | -- |
| 124.81 | 0.52 | 14.1 | -0.445 | -- | 1.83 | -- | -- | -0.278 | -- | 24.3 | 250 | -- | -- |
| 36.73 | 0.284 | 14.1 | -- | 1.71 | 0.419 | -- | -- | -0.0639 | 16.9 | 25.5 | 87 | -- | -- |
| 219.09 | 0.692 | 14.1 | -0.151 | -- | -- | -- | -- | -0.103 | -- | -- | -- | -- | -- |
| 39.49 | 0.294 | 14.1 | -- | 1.84 | -- | -- | -- | -0.0463 | 16.7 | -- | -- | -- | -- |
| 129.87 | 0.531 | 14.1 | -- | -- | 1.76 | -- | -- | -0.216 | -- | 24.4 | 250 | -- | -- |
| 219.69 | 0.692 | 14.1 | -- | -- | -- | -- | -- | -0.0866 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.56 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 10 |
| 18 | 29.35 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 15 | 15 |
| 29 | 29.60 | radiation | 1.0 | 90 | > th | dose independent | rect. | 7 | 11 |
| 34 | 29.66 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 8 | 11 |
| 50 | 29.81 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 8 | 11 |
| 62 | 29.94 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 10 |
| 63 | 29.94 | radiation | 20.0 | 270 | < th | dose independent | rect. | 15 | 15 |
| 81 | 30.07 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 24 | 5 |
| 82 | 30.07 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 7 | 2 |
| 92 | 30.19 | radiation | 1.0 | 270 | > th | dose independent | sin | 1 | NA |
| 97 | 30.23 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 2 | 17 |
| 112 | 30.31 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 24 | 5 |
| 114 | 30.32 | temperature | 25.0 | 90 | > th | dose dependent | sin | 1 | NA |
| 130 | 30.39 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 17 |
| 149 | 30.47 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 8 | 21 |
| 158 | 30.50 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 8 | 18 |
| 165 | 30.51 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 8 | 16 |
| 189 | 30.59 | temperature | 25.0 | 270 | > th | dose dependent | sin | 5 | NA |
| 208 | 30.62 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 11 |
| 210 | 30.62 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 11 |
| 223 | 30.63 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 224 | 30.64 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 16 | 14 |
| 256 | 30.74 | temperature | 25.0 | 270 | < th | dose independent | rect. | 2 | 17 |
| 266 | 30.78 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 10 |
| 267 | 30.78 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 10 |
| 271 | 30.78 | temperature | 10.0 | 270 | > th | dose independent | rect. | 16 | 14 |
| 273 | 30.78 | radiation | 40.0 | 270 | < th | dose independent | rect. | 16 | 14 |
| 300 | 30.82 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 23 | 19 |
| 301 | 30.82 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 21 | 21 |
| 309 | 30.84 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 1 | 17 |
| 317 | 30.86 | humidity | 50.0 | 270 | > th | dose independent | rect. | 16 | 14 |
| 321 | 30.87 | temperature | 25.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 353 | 30.89 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 7 | 21 |
| 365 | 30.91 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 21 | 18 |
| 378 | 30.94 | wind | 9.0 | 270 | < th | dose independent | rect. | 16 | 14 |
| 392 | 30.96 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 5 | 18 |
| 414 | 31.00 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 24 | 6 |
| 512 | 31.12 | temperature | 30.0 | 90 | < th | dose independent | rect. | 17 | 14 |
| 548 | 31.16 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 7 | 17 |
| 550 | 31.16 | temperature | 25.0 | 90 | > th | dose dependent | no | NA | NA |
| 552 | 31.16 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 7 | 17 |
| 560 | 31.17 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 19 |
| 561 | 31.17 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 1 | 23 |
| 562 | 31.17 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 3 | 23 |
| 597 | 31.21 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 10 |
| 616 | 31.24 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 621 | 31.26 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 12 | 7 |
| 622 | 31.26 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 12 | 7 |
| 637 | 31.27 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 658 | 31.29 | temperature | 25.0 | 90 | > th | dose independent | rect. | 8 | 10 |
| 662 | 31.29 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 7 | 22 |
| 683 | 31.32 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 22 | 7 |
| 725 | 31.40 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 4 | 14 |
| 727 | 31.41 | wind | 7.0 | 90 | < th | dose independent | rect. | 7 | 22 |
| 735 | 31.42 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 14 | 19 |
| 741 | 31.44 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 10 |
| 747 | 31.45 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 17 | 14 |
| 750 | 31.45 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 17 | 14 |
| 756 | 31.46 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 14 | 22 |
| 806 | 31.52 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 22 |
| 816 | 31.53 | radiation | 1.0 | 270 | < th | dose independent | rect. | 2 | 19 |
| 826 | 31.54 | temperature | 25.0 | 720 | > th | dose independent | rect. | 7 | 4 |
| 850 | 31.56 | wind | 1.0 | 90 | > th | dose independent | rect. | 7 | 10 |
| 900 | 31.60 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 11 | 22 |
| 923 | 31.63 | radiation | 1.0 | 720 | < th | dose dependent | no | NA | NA |
| 939 | 31.64 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 2 | 19 |
| 945 | 31.65 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 7 | 23 |
| 949 | 31.66 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 16 |
| 962 | 31.67 | temperature | 10.0 | 90 | > th | dose dependent | sin | 0 | NA |
| 964 | 31.67 | radiation | 1.0 | 720 | < th | dose dependent | sin | 1 | NA |
| 979 | 31.68 | radiation | 1.0 | 270 | > th | dose independent | rect. | 18 | 22 |