Os10g0568900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Haloacid dehalogenase-like hydrolase domain containing protein.
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Os10g0568900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Haloacid dehalogenase-like hydrolase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 174.29 | 0.62 | 12.3 | -2.12 | 2.91 | -1.58 | 1.85 | -0.982 | -1.09 | 8.86 | 72 | 914 | -- | -- |
| 172.1 | 0.611 | 12.3 | -2.1 | 2.74 | -1.53 | 1.51 | -- | -1.18 | 9.06 | 73.1 | 1031 | -- | -- |
| 179.6 | 0.624 | 12.3 | -2.14 | 2.72 | -1.48 | -- | 0.0833 | -1.1 | 9.03 | 73 | 1016 | -- | -- |
| 179.22 | 0.624 | 12.3 | -2.16 | 2.7 | -1.5 | -- | -- | -1.16 | 9.08 | 73.35 | 1042 | -- | -- |
| 450.28 | 0.988 | 12.4 | -2.22 | -- | -1.17 | -- | 0.59 | -1.18 | -- | 73 | 1430 | -- | -- |
| 232.33 | 0.715 | 12.3 | -1.98 | 2.17 | -- | 1.26 | -- | -1.01 | 8.67 | -- | -- | -- | -- |
| 237.5 | 0.722 | 12.3 | -1.94 | 2.16 | -- | -- | -- | -1.01 | 8.64 | -- | -- | -- | -- |
| 448.73 | 0.987 | 12.4 | -2.15 | -- | -1.21 | -- | -- | -1.15 | -- | 73.02 | 1431 | -- | -- |
| 306.74 | 0.816 | 12.3 | -- | 2.15 | -1.26 | -- | -- | -0.918 | 8.84 | 77.78 | 1373 | -- | -- |
| 501.69 | 1.05 | 12.3 | -1.93 | -- | -- | -- | -- | -0.99 | -- | -- | -- | -- | -- |
| 336.43 | 0.858 | 12.2 | -- | 2.16 | -- | -- | -- | -0.793 | 8.71 | -- | -- | -- | -- |
| 549.34 | 1.09 | 12.3 | -- | -- | -1.94 | -- | -- | -0.952 | -- | 84 | 1454 | -- | -- |
| 600.09 | 1.14 | 12.3 | -- | -- | -- | -- | -- | -0.775 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 173.29 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 9 |
| 7 | 175.01 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 10 |
| 10 | 175.25 | humidity | 50 | 720 | > th | dose dependent | rect. | 9 | 18 |
| 26 | 176.02 | humidity | 70 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 53 | 177.02 | humidity | 60 | 720 | > th | dose dependent | sin | 19 | NA |
| 55 | 177.17 | humidity | 60 | 720 | > th | dose dependent | rect. | 11 | 10 |
| 61 | 177.28 | humidity | 90 | 720 | < th | dose dependent | rect. | 11 | 21 |
| 65 | 177.39 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 72 | 177.65 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 80 | 177.83 | humidity | 60 | 720 | > th | dose dependent | rect. | 7 | 14 |
| 85 | 177.89 | humidity | 90 | 720 | < th | dose dependent | rect. | 12 | 10 |
| 89 | 177.99 | humidity | 90 | 720 | < th | dose dependent | rect. | 12 | 12 |
| 98 | 178.12 | humidity | 50 | 720 | > th | dose dependent | rect. | 13 | 14 |
| 114 | 178.23 | humidity | 80 | 1440 | < th | dose independent | sin | 2 | NA |
| 147 | 178.75 | humidity | 60 | 720 | > th | dose dependent | rect. | 13 | 8 |
| 164 | 178.88 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 190 | 179.23 | humidity | 80 | 1440 | > th | dose independent | sin | 2 | NA |
| 193 | 179.26 | humidity | 60 | 720 | > th | dose dependent | rect. | 15 | 4 |
| 237 | 179.73 | humidity | 90 | 720 | < th | dose dependent | sin | 19 | NA |
| 271 | 180.14 | humidity | 80 | 720 | > th | dose independent | rect. | 7 | 14 |
| 297 | 180.49 | humidity | 50 | 720 | > th | dose dependent | rect. | 24 | 21 |
| 350 | 181.10 | humidity | 90 | 1440 | < th | dose dependent | rect. | 2 | 13 |
| 378 | 181.29 | humidity | 80 | 720 | > th | dose independent | rect. | 10 | 11 |
| 392 | 181.38 | humidity | 90 | 720 | < th | dose dependent | rect. | 5 | 19 |
| 395 | 181.42 | humidity | 90 | 720 | < th | dose dependent | rect. | 3 | 21 |
| 443 | 181.70 | humidity | 90 | 720 | < th | dose dependent | rect. | 17 | 23 |
| 478 | 181.86 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 479 | 181.86 | humidity | 90 | 720 | < th | dose dependent | rect. | 23 | 23 |
| 498 | 182.01 | humidity | 90 | 720 | < th | dose dependent | no | NA | NA |
| 501 | 182.02 | humidity | 50 | 720 | > th | dose dependent | rect. | 13 | 23 |
| 552 | 182.37 | humidity | 80 | 720 | < th | dose independent | rect. | 11 | 10 |
| 555 | 182.40 | humidity | 50 | 720 | > th | dose dependent | no | NA | NA |
| 568 | 182.46 | humidity | 70 | 720 | > th | dose independent | rect. | 14 | 5 |
| 587 | 182.59 | humidity | 50 | 720 | > th | dose dependent | rect. | 11 | 23 |
| 601 | 182.65 | humidity | 90 | 1440 | < th | dose dependent | sin | 2 | NA |
| 614 | 182.76 | humidity | 80 | 720 | > th | dose independent | sin | 21 | NA |
| 669 | 183.17 | humidity | 80 | 720 | < th | dose independent | sin | 21 | NA |
| 933 | 184.50 | humidity | 70 | 720 | < th | dose independent | rect. | 12 | 21 |
| 986 | 184.71 | humidity | 70 | 720 | > th | dose independent | rect. | 13 | 15 |