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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os10g0568600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Disease resistance protein family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.37 (0.0274) R2 : 0.00259
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0628 (0.0577) R2dN8 : 0.00335 R2N8 : 0.00259
σ : 0.516
deviance : 122.36
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
97.03 0.463 3.37 -0.269 0.113 0.317 -0.0522 -14.7 -0.0542 9.1 18.92 29 2.07 1.08
105.31 0.482 3.39 -0.0359 0.114 1.49 -0.0512 -- -0.0565 9.01 18.92 29 2.07 1.08
97.04 0.462 3.37 -0.271 0.113 0.319 -- -14.7 -0.0543 9.26 18.63 28 2.08 1.1
105.31 0.481 3.39 -0.0374 0.113 1.49 -- -- -0.0566 9.25 18.92 29 2.07 1.08
97.78 0.463 3.37 -0.272 -- 0.311 -- -14.7 -0.0531 -- 18.63 28 2.08 1.1
120.73 0.515 3.37 -0.0376 0.148 -- -0.453 -- 0.0535 5.62 -- -- -- --
121.17 0.515 3.36 -0.0389 0.149 -- -- -- 0.0558 6.43 -- -- -- --
106.06 0.482 3.39 -0.0378 -- 1.48 -- -- -0.0555 -- 18.21 21 2.91 0.211
105.35 0.481 3.39 -- 0.113 1.49 -- -- -0.0525 9.27 18.53 28 2.14 1.1
122.32 0.517 3.37 -0.0351 -- -- -- -- 0.0589 -- -- -- -- --
121.21 0.515 3.36 -- 0.148 -- -- -- 0.0601 6.44 -- -- -- --
106.1 0.481 3.39 -- -- 1.48 -- -- -0.0513 -- 18.53 28 2.14 1.1
122.36 0.516 3.37 -- -- -- -- -- 0.0628 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 96.73 radiation 1.0 43200 < th dose dependent rect. 3 1
2 97.19 temperature 20.0 30 > th dose independent rect. 2 1
3 97.20 atmosphere 1005.0 30 > th dose independent rect. 2 1
4 97.21 temperature 20.0 30 > th dose dependent rect. 2 1
5 97.23 atmosphere 1005.0 30 > th dose dependent rect. 2 1
9 97.33 wind 3.0 30 < th dose independent rect. 2 1
12 97.44 wind 7.0 30 < th dose dependent rect. 2 1
17 97.48 humidity 80.0 30 > th dose independent rect. 2 1
19 97.52 temperature 10.0 30 > th dose independent rect. 2 1
21 97.52 temperature 30.0 30 < th dose independent rect. 2 1
22 97.52 humidity 50.0 30 > th dose independent rect. 2 1
26 97.52 atmosphere 1010.0 30 < th dose independent rect. 2 1
28 97.52 radiation 1.0 30 < th dose independent rect. 2 1
33 97.52 precipitation 0.1 30 < th dose independent rect. 2 1
34 97.52 temperature 10.0 30 > th dose independent rect. 3 23
35 97.52 humidity 50.0 30 > th dose dependent rect. 2 1
37 97.52 radiation 1.0 30 < th dose dependent rect. 2 1
42 97.52 precipitation 0.1 30 < th dose dependent rect. 2 1
45 97.59 temperature 25.0 90 > th dose dependent rect. 1 3
55 98.03 atmosphere 1015.0 30 < th dose dependent rect. 2 1
59 98.09 temperature 25.0 90 > th dose independent rect. 1 3
61 98.11 atmosphere 1000.0 30 > th dose independent rect. 3 23
69 98.15 wind 9.0 1440 < th dose independent rect. 3 1
70 98.15 temperature 10.0 1440 > th dose independent rect. 3 1
73 98.15 temperature 30.0 1440 < th dose independent rect. 3 1
77 98.15 humidity 50.0 1440 > th dose independent rect. 3 1
86 98.15 atmosphere 995.0 1440 > th dose independent rect. 3 1
87 98.15 radiation 1.0 1440 < th dose independent rect. 3 1
107 98.15 temperature 10.0 1440 > th dose independent rect. 4 23
115 98.21 temperature 30.0 30 < th dose dependent rect. 2 1
116 98.27 wind 1.0 30 > th dose independent rect. 2 1
174 100.53 precipitation 0.1 30 < th dose independent rect. 3 23
175 100.53 precipitation 0.1 30 < th dose dependent rect. 3 23
180 101.33 wind 9.0 30 < th dose independent rect. 3 23
189 103.20 humidity 50.0 10 > th dose independent rect. 3 23
299 109.30 atmosphere 995.0 720 > th dose independent rect. 23 16
305 109.61 humidity 90.0 90 < th dose independent rect. 2 1
311 109.98 atmosphere 995.0 720 > th dose independent rect. 11 16
312 110.00 wind 3.0 30 < th dose dependent rect. 2 3
325 110.54 temperature 30.0 30 < th dose independent rect. 3 23
328 110.68 temperature 10.0 30 > th dose dependent rect. 3 23
347 111.08 wind 9.0 30 < th dose dependent rect. 3 23
350 111.25 atmosphere 1000.0 720 > th dose independent rect. 3 8
369 111.52 humidity 90.0 90 < th dose independent rect. 1 4
372 111.53 precipitation 0.1 720 < th dose independent rect. 15 8
374 111.53 precipitation 0.1 720 < th dose dependent rect. 15 8
379 111.67 atmosphere 995.0 720 > th dose independent rect. 3 23
384 111.75 wind 9.0 720 < th dose independent rect. 3 8
385 111.76 atmosphere 1000.0 10 > th dose independent rect. 14 12
387 111.79 radiation 10.0 720 < th dose independent rect. 21 9
389 111.83 temperature 10.0 720 > th dose independent rect. 15 8
390 111.83 temperature 10.0 720 > th dose independent rect. 23 16
393 111.91 humidity 50.0 720 > th dose independent rect. 3 8
395 111.94 atmosphere 1015.0 30 < th dose independent rect. 3 23
401 112.02 temperature 10.0 720 > th dose independent rect. 3 8
403 112.02 temperature 10.0 720 > th dose independent rect. 11 16
404 112.02 temperature 30.0 720 < th dose independent rect. 15 22
406 112.03 temperature 25.0 720 > th dose dependent rect. 3 6
417 112.19 temperature 25.0 720 > th dose independent rect. 5 4
438 112.38 humidity 70.0 4320 > th dose independent rect. 22 5
441 112.40 wind 9.0 720 < th dose dependent rect. 2 1
442 112.43 radiation 40.0 30 < th dose independent rect. 3 23
443 112.47 wind 1.0 10 < th dose independent rect. 13 14
449 112.54 precipitation 0.1 720 < th dose independent rect. 11 16
450 112.54 precipitation 0.1 720 < th dose dependent rect. 11 16
459 112.59 wind 1.0 10 < th dose independent rect. 21 6
469 112.61 humidity 70.0 4320 > th dose independent rect. 21 1
471 112.62 atmosphere 1000.0 720 > th dose independent rect. 3 6
506 112.75 radiation 40.0 10 < th dose dependent rect. 3 23
508 112.78 atmosphere 995.0 720 > th dose independent rect. 15 23
513 112.88 atmosphere 995.0 720 > th dose independent rect. 21 18
517 112.89 temperature 30.0 720 < th dose independent rect. 15 6
540 113.07 temperature 25.0 1440 < th dose independent rect. 1 1
541 113.07 atmosphere 995.0 720 > th dose independent rect. 14 1
543 113.07 humidity 50.0 30 > th dose dependent rect. 3 23
558 113.18 radiation 10.0 720 < th dose dependent rect. 21 9
565 113.24 wind 3.0 720 < th dose independent rect. 2 1
579 113.36 temperature 25.0 720 > th dose dependent rect. 8 1
584 113.40 humidity 70.0 720 > th dose independent rect. 3 6
590 113.41 temperature 10.0 30 > th dose dependent rect. 5 21
596 113.43 radiation 1.0 720 < th dose dependent rect. 18 9
604 113.46 radiation 40.0 30 < th dose independent rect. 14 12
607 113.47 temperature 20.0 10 > th dose independent rect. 2 3
611 113.50 atmosphere 995.0 720 > th dose independent rect. 9 18
613 113.52 wind 1.0 10 > th dose independent rect. 21 23
618 113.54 wind 9.0 720 < th dose independent rect. 15 6
626 113.57 wind 1.0 10 > th dose independent rect. 21 14
629 113.59 atmosphere 1000.0 10 < th dose dependent rect. 18 2
633 113.61 atmosphere 1000.0 10 < th dose independent rect. 18 2
639 113.62 temperature 25.0 10 < th dose independent rect. 2 12
642 113.63 wind 9.0 10 < th dose independent rect. 14 12
653 113.72 atmosphere 995.0 720 > th dose independent rect. 3 14
654 113.74 atmosphere 995.0 720 > th dose independent rect. 15 6
656 113.74 temperature 30.0 720 < th dose independent rect. 15 14
660 113.75 atmosphere 1000.0 90 < th dose independent rect. 18 1
667 113.76 atmosphere 1000.0 10 > th dose independent rect. 2 12
674 113.78 atmosphere 995.0 1440 > th dose independent rect. 17 10
675 113.78 atmosphere 995.0 720 > th dose independent rect. 3 16
677 113.79 humidity 60.0 10 > th dose independent rect. 14 12
678 113.79 wind 1.0 10 < th dose independent rect. 8 19
686 113.81 precipitation 0.1 10 < th dose independent rect. 2 12
687 113.81 radiation 10.0 10 < th dose independent rect. 3 23
689 113.81 precipitation 0.1 10 < th dose dependent rect. 2 12
693 113.83 temperature 10.0 10 > th dose independent rect. 2 12
695 113.83 temperature 10.0 10 > th dose independent rect. 14 12
697 113.83 atmosphere 1015.0 10 < th dose independent rect. 2 12
698 113.84 temperature 30.0 720 < th dose independent rect. 9 18
700 113.85 temperature 30.0 720 < th dose independent rect. 15 8
701 113.86 precipitation 0.1 720 < th dose independent rect. 15 6
702 113.86 radiation 1.0 720 < th dose independent rect. 18 9
704 113.86 precipitation 0.1 720 < th dose dependent rect. 15 6
737 113.94 precipitation 0.1 720 < th dose independent rect. 3 8
741 113.94 precipitation 0.1 720 < th dose dependent rect. 3 8
742 113.95 atmosphere 995.0 720 > th dose independent rect. 7 8
745 113.96 precipitation 0.1 10 < th dose independent rect. 14 12
747 113.96 precipitation 0.1 10 < th dose dependent rect. 14 12
751 113.99 wind 1.0 10 > th dose independent rect. 23 12
762 114.04 temperature 10.0 720 > th dose independent rect. 15 6
764 114.04 temperature 10.0 720 > th dose independent rect. 21 18
765 114.04 precipitation 0.1 720 < th dose independent rect. 9 18
767 114.04 precipitation 0.1 720 < th dose dependent rect. 9 18
774 114.07 precipitation 0.1 720 < th dose independent rect. 13 2
778 114.07 precipitation 0.1 720 < th dose dependent rect. 13 2
783 114.08 atmosphere 1015.0 720 < th dose independent rect. 15 6
788 114.11 temperature 25.0 720 > th dose independent rect. 8 1
796 114.12 wind 9.0 720 < th dose independent rect. 3 6
797 114.12 temperature 10.0 720 > th dose independent rect. 3 6
800 114.12 wind 9.0 10 < th dose independent rect. 2 12
801 114.12 atmosphere 995.0 720 > th dose independent rect. 15 16
802 114.12 temperature 10.0 720 > th dose independent rect. 9 18
809 114.15 temperature 25.0 720 < th dose independent rect. 21 4
821 114.19 atmosphere 1000.0 10 > th dose independent rect. 16 10
827 114.19 precipitation 0.1 720 < th dose independent rect. 23 16
828 114.19 precipitation 0.1 720 < th dose dependent rect. 23 16
830 114.20 temperature 30.0 720 < th dose independent rect. 17 10
846 114.26 temperature 10.0 720 > th dose independent rect. 13 2
847 114.26 atmosphere 1015.0 720 < th dose independent rect. 13 2
848 114.26 temperature 10.0 720 > th dose independent rect. 15 22
851 114.27 temperature 10.0 720 > th dose independent rect. 1 2
856 114.27 humidity 50.0 720 > th dose independent rect. 1 2
862 114.27 atmosphere 995.0 720 > th dose independent rect. 1 2
866 114.27 radiation 1.0 720 < th dose independent rect. 1 2
876 114.27 precipitation 0.1 720 < th dose independent rect. 1 2
877 114.27 wind 1.0 720 > th dose independent rect. 15 8
880 114.27 radiation 1.0 720 < th dose dependent rect. 1 2
890 114.27 precipitation 0.1 720 < th dose dependent rect. 1 2
896 114.30 temperature 25.0 720 < th dose independent rect. 6 6
901 114.31 radiation 40.0 10 < th dose dependent rect. 14 12
903 114.32 radiation 10.0 10 < th dose independent rect. 5 21
910 114.33 humidity 80.0 4320 > th dose independent rect. 4 7
911 114.33 temperature 25.0 10 > th dose independent rect. 5 15
938 114.35 temperature 25.0 720 < th dose independent rect. 2 10
956 114.38 atmosphere 995.0 10 > th dose dependent rect. 2 12
958 114.39 temperature 10.0 1440 > th dose independent rect. 3 12
961 114.39 temperature 10.0 1440 > th dose independent rect. 15 12
968 114.39 precipitation 0.1 720 < th dose independent rect. 15 22
972 114.39 precipitation 0.1 720 < th dose dependent rect. 15 22
990 114.40 atmosphere 1000.0 720 > th dose independent rect. 3 12
994 114.40 humidity 90.0 4320 < th dose dependent rect. 5 3
1000 114.41 wind 1.0 720 > th dose independent rect. 14 1