Os10g0568000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0568000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 82.19 | 0.426 | 7.97 | 1.92 | 0.817 | -1.25 | 0.28 | 1.28 | 0.483 | 20.9 | 27.1 | 5773 | -- | -- |
| 84.18 | 0.427 | 8.02 | 1.65 | 0.77 | -1.22 | 0.348 | -- | 0.447 | 20.8 | 27.2 | 5895 | -- | -- |
| 82.45 | 0.423 | 7.97 | 1.91 | 0.815 | -1.25 | -- | 1.28 | 0.483 | 20.9 | 27.11 | 5771 | -- | -- |
| 83.41 | 0.425 | 8.02 | 1.53 | 0.816 | -1.16 | -- | -- | 0.373 | 21 | 27.14 | 5759 | -- | -- |
| 120.53 | 0.511 | 7.95 | 1.91 | -- | -1.24 | -- | 1.29 | 0.476 | -- | 27.1 | 5773 | -- | -- |
| 128.58 | 0.532 | 8.08 | 1.06 | 0.813 | -- | 0.245 | -- | 0.144 | 20.7 | -- | -- | -- | -- |
| 128.78 | 0.531 | 8.08 | 1.06 | 0.811 | -- | -- | -- | 0.144 | 20.7 | -- | -- | -- | -- |
| 121.53 | 0.513 | 8 | 1.52 | -- | -1.14 | -- | -- | 0.362 | -- | 27.1 | 5773 | -- | -- |
| 134.67 | 0.54 | 8.07 | -- | 0.871 | -0.704 | -- | -- | 0.161 | 20.9 | 28.7 | 5884 | -- | -- |
| 166.05 | 0.602 | 8.05 | 1.05 | -- | -- | -- | -- | 0.137 | -- | -- | -- | -- | -- |
| 158.12 | 0.588 | 8.1 | -- | 0.809 | -- | -- | -- | 0.0264 | 20.8 | -- | -- | -- | -- |
| 171.49 | 0.61 | 8.06 | -- | -- | -0.695 | -- | -- | 0.0927 | -- | 28.86 | 5790 | -- | -- |
| 195.33 | 0.652 | 8.08 | -- | -- | -- | -- | -- | 0.0204 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 81.23 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 6 |
| 44 | 82.55 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 20 |
| 65 | 82.84 | temperature | 25 | 1440 | > th | dose dependent | sin | 19 | NA |
| 130 | 83.85 | temperature | 25 | 1440 | > th | dose dependent | rect. | 1 | 18 |
| 133 | 83.88 | temperature | 25 | 1440 | > th | dose dependent | rect. | 5 | 14 |
| 232 | 84.50 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 361 | 85.63 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 369 | 85.71 | temperature | 30 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 376 | 85.75 | radiation | 1 | 4320 | < th | dose independent | rect. | 18 | 11 |
| 406 | 86.01 | radiation | 20 | 14400 | > th | dose dependent | rect. | 16 | 15 |
| 410 | 86.06 | radiation | 1 | 4320 | > th | dose independent | rect. | 18 | 11 |
| 413 | 86.07 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 6 |
| 433 | 86.22 | radiation | 1 | 4320 | < th | dose independent | rect. | 18 | 6 |
| 442 | 86.28 | radiation | 1 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 454 | 86.29 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 6 |
| 459 | 86.31 | radiation | 20 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 475 | 86.35 | radiation | 1 | 4320 | < th | dose independent | rect. | 18 | 2 |
| 724 | 87.49 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 15 |
| 725 | 87.50 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 12 |
| 732 | 87.51 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 6 |
| 733 | 87.51 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 8 |
| 734 | 87.51 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 10 |
| 738 | 87.52 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 767 | 87.63 | temperature | 25 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 874 | 88.23 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 902 | 88.41 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 23 |
| 919 | 88.47 | humidity | 90 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 951 | 88.55 | wind | 1 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 958 | 88.58 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 19 |
| 977 | 88.69 | temperature | 25 | 4320 | > th | dose independent | sin | 3 | NA |
| 982 | 88.70 | wind | 9 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 990 | 88.73 | humidity | 90 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 992 | 88.74 | radiation | 20 | 14400 | < th | dose independent | rect. | 16 | 13 |
| 1000 | 88.76 | radiation | 20 | 14400 | < th | dose independent | rect. | 16 | 2 |