Os10g0567600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os10g0567600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 52.79 | 0.341 | 9.77 | 0.448 | 1.46 | 0.815 | -0.00171 | -1.05 | 0.37 | 7.16 | 24.95 | 1471 | -- | -- |
| 50.37 | 0.331 | 9.75 | 0.642 | 1.49 | 0.773 | 0.000484 | -- | 0.32 | 7.1 | 23.79 | 7249 | -- | -- |
| 52.78 | 0.338 | 9.77 | 0.476 | 1.47 | 0.814 | -- | -0.98 | 0.365 | 7.12 | 24.53 | 1478 | -- | -- |
| 50.14 | 0.33 | 9.76 | 0.687 | 1.45 | 0.744 | -- | -- | 0.327 | 7.13 | 24.43 | 7223 | -- | -- |
| 156.6 | 0.583 | 9.83 | 0.153 | -- | 0.936 | -- | -2.24 | 0.434 | -- | 28.61 | 5738 | -- | -- |
| 74.55 | 0.405 | 9.71 | 0.999 | 1.47 | -- | 0.0514 | -- | 0.539 | 7.03 | -- | -- | -- | -- |
| 74.56 | 0.404 | 9.71 | 1 | 1.47 | -- | -- | -- | 0.539 | 7.03 | -- | -- | -- | -- |
| 160.08 | 0.589 | 9.8 | 0.665 | -- | 0.809 | -- | -- | 0.307 | -- | 23.83 | 7153 | -- | -- |
| 56.04 | 0.349 | 9.82 | -- | 1.45 | 1.24 | -- | -- | 0.0464 | 7.28 | 18.09 | 11173 | -- | -- |
| 187.97 | 0.641 | 9.74 | 1.03 | -- | -- | -- | -- | 0.566 | -- | -- | -- | -- | -- |
| 100.94 | 0.47 | 9.74 | -- | 1.48 | -- | -- | -- | 0.428 | 6.99 | -- | -- | -- | -- |
| 166.57 | 0.601 | 9.85 | -- | -- | 1.44 | -- | -- | 0.0918 | -- | 12.69 | 8589 | -- | -- |
| 215.93 | 0.686 | 9.77 | -- | -- | -- | -- | -- | 0.452 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 50.47 | temperature | 30 | 14400 | > th | dose independent | rect. | 15 | 3 |
| 16 | 50.52 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 14 |
| 17 | 50.53 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 4 |
| 19 | 50.53 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 9 |
| 20 | 50.53 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 11 |
| 46 | 50.66 | temperature | 30 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 70 | 50.93 | temperature | 30 | 14400 | > th | dose independent | sin | 13 | NA |
| 72 | 50.95 | temperature | 30 | 14400 | < th | dose independent | sin | 13 | NA |
| 76 | 50.99 | temperature | 25 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 145 | 51.30 | wind | 3 | 43200 | > th | dose dependent | rect. | 20 | 2 |
| 148 | 51.35 | wind | 7 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 246 | 51.68 | temperature | 25 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 249 | 51.71 | temperature | 30 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 257 | 51.76 | temperature | 30 | 14400 | > th | dose dependent | rect. | 14 | 3 |
| 275 | 51.79 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 2 |
| 353 | 52.08 | temperature | 30 | 14400 | > th | dose dependent | sin | 13 | NA |
| 357 | 52.12 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 2 |
| 427 | 52.25 | temperature | 10 | 720 | > th | dose dependent | rect. | 18 | 20 |
| 445 | 52.30 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 452 | 52.35 | temperature | 30 | 14400 | > th | dose independent | no | NA | NA |
| 563 | 52.37 | temperature | 30 | 14400 | < th | dose independent | no | NA | NA |
| 676 | 52.42 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 9 |
| 686 | 52.45 | temperature | 30 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 704 | 52.47 | temperature | 15 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 738 | 52.52 | temperature | 25 | 1440 | > th | dose dependent | rect. | 5 | 15 |
| 809 | 52.60 | temperature | 25 | 1440 | > th | dose dependent | sin | 20 | NA |
| 828 | 52.62 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 22 |
| 956 | 52.78 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 22 |
| 961 | 52.79 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 980 | 52.81 | temperature | 20 | 720 | > th | dose dependent | sin | 7 | NA |
| 982 | 52.81 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |