Os10g0567200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0567200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 131.22 | 0.538 | 6.29 | 0.464 | 0.346 | 1.23 | -1.26 | 1.72 | 0.403 | 23.4 | 25.8 | 62 | -- | -- |
| 134.39 | 0.544 | 6.25 | 0.763 | 0.218 | 1.21 | -1.09 | -- | 0.488 | 21.9 | 27.67 | 26 | -- | -- |
| 135.35 | 0.542 | 6.3 | 0.58 | 0.444 | 1.07 | -- | 0.923 | 0.369 | 0.814 | 25.26 | 65 | -- | -- |
| 136.15 | 0.547 | 6.26 | 0.739 | 0.425 | 0.994 | -- | -- | 0.431 | 1.42 | 25.57 | 54 | -- | -- |
| 141.38 | 0.557 | 6.25 | 0.739 | -- | 1.34 | -- | 0.556 | 0.492 | -- | 27.43 | 19 | -- | -- |
| 150.68 | 0.575 | 6.31 | 0.496 | 0.644 | -- | -0.36 | -- | 0.221 | 1.24 | -- | -- | -- | -- |
| 151.13 | 0.576 | 6.31 | 0.508 | 0.648 | -- | -- | -- | 0.222 | 1.47 | -- | -- | -- | -- |
| 141.55 | 0.554 | 6.24 | 0.835 | -- | 1.33 | -- | -- | 0.505 | -- | 28.05 | 7 | -- | -- |
| 149.32 | 0.572 | 6.29 | -- | 0.498 | 0.721 | -- | -- | 0.299 | 1.49 | 25.57 | 54 | -- | -- |
| 176.9 | 0.621 | 6.3 | 0.534 | -- | -- | -- | -- | 0.236 | -- | -- | -- | -- | -- |
| 157.93 | 0.588 | 6.32 | -- | 0.657 | -- | -- | -- | 0.165 | 1.5 | -- | -- | -- | -- |
| 158.72 | 0.589 | 6.27 | -- | -- | 1.09 | -- | -- | 0.369 | -- | 28.2 | 6 | -- | -- |
| 184.43 | 0.634 | 6.31 | -- | -- | -- | -- | -- | 0.177 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 120.51 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 16 |
| 3 | 120.82 | temperature | 30 | 10 | < th | dose dependent | rect. | 16 | 16 |
| 5 | 120.88 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 18 |
| 7 | 121.02 | temperature | 30 | 270 | < th | dose dependent | rect. | 13 | 17 |
| 9 | 121.11 | temperature | 30 | 10 | < th | dose dependent | rect. | 14 | 18 |
| 27 | 121.77 | temperature | 30 | 10 | < th | dose dependent | rect. | 14 | 20 |
| 101 | 124.24 | temperature | 10 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 136 | 125.93 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 3 |
| 167 | 126.96 | temperature | 20 | 90 | > th | dose independent | rect. | 6 | 23 |
| 190 | 127.45 | temperature | 25 | 720 | < th | dose independent | rect. | 18 | 1 |
| 235 | 128.44 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 11 |
| 238 | 128.51 | temperature | 30 | 90 | < th | dose dependent | sin | 11 | NA |
| 247 | 128.56 | temperature | 25 | 720 | < th | dose independent | rect. | 17 | 4 |
| 257 | 128.70 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 6 |
| 289 | 129.02 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 3 |
| 345 | 129.44 | temperature | 25 | 90 | < th | dose dependent | rect. | 24 | 23 |
| 373 | 129.65 | temperature | 30 | 720 | < th | dose dependent | sin | 16 | NA |
| 449 | 130.14 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 14 |
| 462 | 130.21 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 10 |
| 476 | 130.35 | radiation | 1 | 720 | > th | dose independent | sin | 17 | NA |
| 527 | 130.65 | temperature | 25 | 90 | < th | dose independent | rect. | 15 | 18 |
| 531 | 130.68 | temperature | 25 | 90 | < th | dose independent | rect. | 13 | 20 |
| 546 | 130.78 | temperature | 10 | 720 | > th | dose dependent | sin | 19 | NA |
| 561 | 130.85 | radiation | 1 | 720 | < th | dose independent | sin | 14 | NA |
| 578 | 130.94 | radiation | 1 | 720 | < th | dose independent | rect. | 17 | 9 |
| 603 | 131.07 | humidity | 70 | 720 | > th | dose independent | rect. | 18 | 12 |
| 606 | 131.08 | temperature | 15 | 270 | > th | dose dependent | sin | 14 | NA |
| 632 | 131.19 | temperature | 25 | 90 | < th | dose independent | rect. | 17 | 16 |
| 636 | 131.20 | temperature | 20 | 90 | > th | dose dependent | sin | 11 | NA |
| 637 | 131.20 | temperature | 25 | 10 | < th | dose dependent | rect. | 24 | 22 |
| 640 | 131.21 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 11 |
| 670 | 131.39 | temperature | 15 | 30 | > th | dose dependent | rect. | 15 | 14 |
| 706 | 131.57 | radiation | 1 | 720 | > th | dose independent | rect. | 13 | 6 |
| 719 | 131.58 | temperature | 25 | 720 | > th | dose independent | rect. | 13 | 7 |
| 728 | 131.61 | radiation | 1 | 720 | < th | dose independent | rect. | 17 | 6 |
| 757 | 131.72 | radiation | 1 | 720 | < th | dose independent | rect. | 15 | 15 |
| 764 | 131.73 | radiation | 1 | 720 | < th | dose independent | rect. | 17 | 13 |
| 769 | 131.75 | radiation | 1 | 720 | > th | dose independent | rect. | 7 | 12 |
| 790 | 131.81 | temperature | 25 | 720 | > th | dose independent | rect. | 15 | 4 |
| 804 | 131.85 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 828 | 131.93 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 18 |
| 830 | 131.93 | temperature | 25 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 831 | 131.94 | temperature | 25 | 90 | < th | dose dependent | rect. | 1 | 8 |
| 835 | 131.95 | temperature | 25 | 30 | < th | dose dependent | no | NA | NA |
| 843 | 131.96 | temperature | 25 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 845 | 131.96 | temperature | 25 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 848 | 131.97 | radiation | 1 | 720 | < th | dose dependent | sin | 14 | NA |
| 857 | 131.98 | temperature | 25 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 864 | 132.00 | temperature | 25 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 870 | 132.03 | temperature | 25 | 720 | > th | dose independent | rect. | 13 | 9 |
| 880 | 132.05 | wind | 9 | 30 | < th | dose dependent | rect. | 6 | 23 |
| 891 | 132.08 | radiation | 1 | 720 | < th | dose dependent | rect. | 17 | 2 |
| 907 | 132.13 | temperature | 25 | 720 | < th | dose independent | sin | 16 | NA |
| 908 | 132.13 | radiation | 1 | 720 | < th | dose dependent | rect. | 17 | 9 |
| 909 | 132.13 | temperature | 25 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 984 | 132.31 | radiation | 1 | 720 | < th | dose dependent | rect. | 8 | 13 |