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Os10g0565500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.98 (0.0245) R2 : 0.855
β1 : -- (--) R2dD : -- R2D : --
β2 : 3.2 (0.0623) R2dC : 0.848 R2C : 0.835
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.359 (0.0514) R2dN8 : 0.0201 R2N8 : 0.0068
σ : 0.461
deviance : 97.18
__
_____
C
peak time of C : 8.11
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
81.8 0.425 9.99 0.367 2.84 0.612 -0.414 -0.559 -0.361 7.33 2.328 15 -- --
81.9 0.425 9.99 0.377 2.82 0.591 -0.827 -- -0.357 7.39 2.328 15 -- --
80.69 0.422 9.99 0.356 2.79 0.637 -- -0.688 -0.361 7.32 2.328 15 -- --
83.75 0.429 9.99 0.357 2.81 0.615 -- -- -0.358 7.35 2.328 15 -- --
426.08 0.967 10.1 0.412 -- 1.43 -- -0.888 -0.356 -- 2.328 15 -- --
91.17 0.448 9.97 0.396 3.2 -- -0.89 -- -0.319 8.12 -- -- -- --
93.57 0.453 9.97 0.37 3.2 -- -- -- -0.318 8.12 -- -- -- --
425.6 0.965 10.1 0.362 -- 1.43 -- -- -0.302 -- 0.9339 13 -- --
87.12 0.437 10 -- 2.81 0.622 -- -- -0.398 7.33 2.328 15 -- --
656.64 1.2 10.1 0.398 -- -- -- -- -0.28 -- -- -- -- --
97.18 0.461 9.98 -- 3.2 -- -- -- -0.359 8.11 -- -- -- --
429.06 0.968 10.1 -- -- 1.43 -- -- -0.343 -- 0.9339 13 -- --
660.81 1.2 10.1 -- -- -- -- -- -0.324 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 73.37 radiation 1.0 10 < th dose independent rect. 24 17
3 73.82 radiation 1.0 10 < th dose dependent rect. 24 17
5 74.15 temperature 20.0 270 > th dose independent rect. 23 3
7 74.40 temperature 15.0 270 > th dose dependent rect. 23 3
9 74.44 temperature 15.0 90 > th dose dependent rect. 23 5
12 74.49 radiation 1.0 90 < th dose dependent rect. 23 18
13 74.51 temperature 20.0 10 > th dose independent rect. 24 5
16 74.68 temperature 20.0 270 > th dose independent rect. 24 1
26 75.21 radiation 1.0 10 > th dose independent rect. 5 11
41 75.41 temperature 15.0 10 > th dose dependent rect. 24 5
44 75.47 radiation 1.0 10 < th dose dependent sin 3 NA
47 75.64 radiation 1.0 10 < th dose independent rect. 24 14
49 75.65 radiation 1.0 10 > th dose independent sin 4 NA
52 75.72 radiation 1.0 10 < th dose independent sin 4 NA
55 75.76 radiation 1.0 10 < th dose dependent rect. 24 14
92 76.20 temperature 20.0 90 > th dose independent rect. 24 17
99 76.40 radiation 1.0 10 < th dose independent rect. 24 12
108 76.52 radiation 1.0 10 < th dose dependent rect. 24 12
128 76.85 radiation 1.0 10 < th dose independent rect. 24 8
140 76.97 radiation 1.0 10 < th dose dependent rect. 24 6
142 76.98 temperature 20.0 270 > th dose independent rect. 22 19
143 76.98 radiation 1.0 10 < th dose dependent rect. 24 8
155 77.15 radiation 1.0 10 < th dose independent rect. 24 6
163 77.23 humidity 80.0 10 > th dose independent rect. 24 5
164 77.24 radiation 20.0 10 < th dose dependent rect. 10 19
179 77.37 temperature 20.0 90 > th dose independent rect. 9 19
187 77.41 radiation 40.0 10 < th dose dependent rect. 12 17
217 77.87 temperature 20.0 10 > th dose independent rect. 9 20
227 77.98 temperature 15.0 270 > th dose independent rect. 7 11
229 77.99 temperature 20.0 270 > th dose independent rect. 7 20
234 78.04 humidity 60.0 10 > th dose dependent rect. 24 5
253 78.17 wind 9.0 10 < th dose dependent rect. 24 5
288 78.48 radiation 10.0 10 < th dose independent rect. 10 19
292 78.53 humidity 80.0 270 > th dose independent rect. 23 3
299 78.56 humidity 80.0 270 > th dose independent rect. 24 1
307 78.61 atmosphere 1010.0 10 < th dose independent rect. 24 5
317 78.64 wind 9.0 10 < th dose independent rect. 24 5
319 78.64 temperature 30.0 10 < th dose independent rect. 24 5
320 78.64 humidity 50.0 10 > th dose independent rect. 24 5
323 78.64 atmosphere 995.0 10 > th dose independent rect. 24 5
329 78.64 temperature 10.0 10 > th dose independent rect. 5 19
353 78.88 atmosphere 1015.0 10 < th dose independent rect. 5 19
354 78.88 wind 9.0 270 < th dose dependent rect. 23 2
379 78.96 precipitation 0.1 10 < th dose independent rect. 5 19
380 78.96 precipitation 0.1 10 < th dose dependent rect. 5 19
385 79.03 wind 3.0 10 < th dose independent rect. 24 5
393 79.08 wind 9.0 90 < th dose dependent rect. 23 5
398 79.10 radiation 30.0 90 < th dose independent rect. 13 15
402 79.11 humidity 50.0 90 > th dose dependent rect. 23 5
403 79.12 atmosphere 1010.0 90 < th dose independent rect. 23 5
406 79.13 atmosphere 1010.0 270 < th dose independent rect. 23 2
408 79.13 temperature 30.0 270 < th dose independent rect. 23 3
409 79.13 humidity 50.0 270 > th dose independent rect. 23 3
412 79.13 atmosphere 995.0 270 > th dose independent rect. 23 3
414 79.13 radiation 1.0 270 < th dose independent rect. 23 3
419 79.13 temperature 10.0 270 > th dose independent rect. 2 21
420 79.13 radiation 1.0 270 < th dose dependent rect. 23 3
426 79.14 wind 9.0 270 < th dose independent rect. 23 3
430 79.15 precipitation 0.1 270 < th dose independent rect. 23 3
432 79.15 humidity 50.0 270 > th dose dependent rect. 23 3
433 79.15 precipitation 0.1 270 < th dose dependent rect. 23 3
477 79.34 precipitation 0.1 10 < th dose independent rect. 24 5
478 79.34 precipitation 0.1 10 < th dose dependent rect. 24 5
480 79.35 wind 3.0 270 < th dose independent rect. 24 1
487 79.37 atmosphere 995.0 10 > th dose independent rect. 5 19
506 79.43 humidity 50.0 270 > th dose dependent rect. 24 1
508 79.44 atmosphere 995.0 90 > th dose dependent rect. 4 19
509 79.45 wind 9.0 10 < th dose independent rect. 5 19
593 79.63 atmosphere 995.0 10 > th dose dependent rect. 5 19
607 79.69 wind 9.0 90 < th dose independent rect. 23 5
609 79.69 temperature 30.0 90 < th dose independent rect. 23 5
610 79.69 humidity 50.0 90 > th dose independent rect. 23 5
613 79.69 atmosphere 995.0 90 > th dose independent rect. 23 5
619 79.69 temperature 10.0 90 > th dose independent rect. 4 19
651 79.79 atmosphere 995.0 270 > th dose independent rect. 2 21
655 79.80 precipitation 0.1 270 < th dose independent rect. 2 21
656 79.80 precipitation 0.1 270 < th dose dependent rect. 2 21
696 79.92 atmosphere 1015.0 90 < th dose independent rect. 4 19
698 79.92 atmosphere 995.0 10 > th dose dependent rect. 24 5
711 79.97 precipitation 0.1 90 < th dose independent rect. 23 5
714 79.97 precipitation 0.1 90 < th dose dependent rect. 23 5
753 80.14 atmosphere 995.0 10 > th dose dependent rect. 5 10
754 80.15 wind 9.0 270 < th dose independent rect. 2 21
768 80.18 atmosphere 995.0 270 > th dose dependent rect. 24 1
863 80.40 wind 9.0 90 < th dose independent rect. 4 19
876 80.43 atmosphere 995.0 90 > th dose independent rect. 4 19
887 80.47 precipitation 0.1 270 < th dose independent rect. 7 11
889 80.47 atmosphere 1015.0 270 < th dose independent rect. 2 21
891 80.47 precipitation 0.1 270 < th dose dependent rect. 7 11
924 80.52 atmosphere 1015.0 10 < th dose dependent rect. 24 5
972 80.68 wind 9.0 270 < th dose independent rect. 7 10
973 80.68 atmosphere 995.0 270 > th dose independent rect. 17 14
978 80.70 radiation 1.0 270 < th dose independent rect. 8 7
981 80.70 precipitation 0.1 270 < th dose independent rect. 3 19
984 80.70 radiation 1.0 270 < th dose dependent rect. 8 7
985 80.70 precipitation 0.1 270 < th dose dependent rect. 3 19
1000 80.77 precipitation 0.1 90 < th dose independent rect. 15 13