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Os10g0565000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : MORN motif repeat containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.9 (0.0247) R2 : 0.513
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.28 (0.0608) R2dC : 0.475 R2C : 0.462
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.316 (0.0519) R2dN8 : 0.0512 R2N8 : 0.038
σ : 0.465
deviance : 98.74
__
_____
C
peak time of C : 21.4
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
75.32 0.408 11.8 1.6 1.29 -0.692 -0.624 3.06 0.12 21.5 21.5 1459 -- --
83.07 0.424 11.9 1.06 1.27 -0.636 -0.672 -- 0.00506 21.4 10.47 29478 -- --
76.73 0.408 11.8 1.62 1.29 -0.689 -- 3.04 0.119 21.4 21.5 1483 -- --
83.81 0.426 11.8 1.19 1.29 -0.749 -- -- 0.03 21.5 10.98 27268 -- --
163.18 0.598 11.8 1.15 -- -1 -- 2.89 0.0105 -- 21 1494 -- --
91.02 0.447 11.9 0.475 1.27 -- -0.583 -- -0.261 21.4 -- -- -- --
92.26 0.45 11.9 0.496 1.28 -- -- -- -0.261 21.4 -- -- -- --
170.59 0.611 11.8 0.702 -- -1.09 -- -- -0.12 -- 13.8 5830 -- --
96.07 0.459 11.9 -- 1.24 -0.502 -- -- -0.256 21 10.98 27268 -- --
187.8 0.64 11.9 0.503 -- -- -- -- -0.265 -- -- -- -- --
98.74 0.465 11.9 -- 1.28 -- -- -- -0.316 21.4 -- -- -- --
182.84 0.632 11.9 -- -- -0.872 -- -- -0.222 -- 13.8 5830 -- --
194.48 0.651 11.9 -- -- -- -- -- -0.321 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 60.07 temperature 10.0 270 > th dose dependent rect. 4 18
6 62.36 temperature 15.0 270 > th dose dependent rect. 3 7
10 63.35 temperature 15.0 270 > th dose dependent rect. 4 5
13 63.95 temperature 10.0 10 > th dose dependent rect. 6 18
24 64.95 temperature 10.0 10 > th dose dependent rect. 6 16
37 65.54 radiation 1.0 90 < th dose dependent sin 8 NA
40 65.78 radiation 1.0 90 > th dose independent sin 8 NA
50 66.15 radiation 1.0 90 < th dose independent sin 8 NA
59 66.57 temperature 20.0 270 > th dose independent rect. 4 5
83 67.61 radiation 20.0 270 < th dose independent rect. 4 5
91 67.71 temperature 20.0 270 > th dose independent rect. 6 1
94 67.78 radiation 1.0 90 > th dose independent rect. 17 18
95 67.80 radiation 20.0 90 < th dose independent rect. 5 19
96 67.83 temperature 20.0 270 > th dose independent rect. 5 3
100 67.86 temperature 20.0 270 > th dose dependent rect. 6 1
105 68.06 radiation 30.0 270 < th dose independent rect. 3 7
115 68.26 temperature 20.0 10 > th dose dependent rect. 5 6
125 68.48 radiation 40.0 90 < th dose independent rect. 5 6
128 68.50 radiation 40.0 10 < th dose dependent rect. 6 5
140 68.65 temperature 25.0 10 > th dose independent rect. 5 6
142 68.70 radiation 1.0 270 > th dose independent rect. 17 14
143 68.73 humidity 60.0 270 > th dose independent rect. 3 8
144 68.73 radiation 30.0 270 < th dose independent rect. 3 19
145 68.76 radiation 1.0 90 > th dose independent rect. 4 7
166 68.94 radiation 40.0 270 < th dose dependent rect. 4 5
173 69.09 radiation 40.0 10 < th dose dependent rect. 6 18
183 69.31 radiation 30.0 10 < th dose independent rect. 6 5
191 69.44 humidity 60.0 90 > th dose independent rect. 5 6
194 69.48 radiation 20.0 270 < th dose independent rect. 17 15
205 69.62 precipitation 0.1 270 < th dose independent rect. 3 19
206 69.62 precipitation 0.1 270 < th dose dependent rect. 3 19
216 69.82 radiation 10.0 270 < th dose independent rect. 3 20
221 69.85 radiation 1.0 90 < th dose dependent rect. 23 18
233 69.97 radiation 10.0 270 < th dose independent rect. 5 3
242 70.04 humidity 50.0 270 > th dose dependent rect. 22 5
246 70.07 radiation 1.0 90 < th dose independent rect. 23 18
249 70.10 wind 9.0 90 < th dose dependent rect. 5 6
262 70.24 radiation 1.0 90 < th dose dependent rect. 23 9
263 70.24 radiation 1.0 90 < th dose dependent rect. 23 12
271 70.29 atmosphere 1010.0 90 < th dose independent rect. 5 6
273 70.29 humidity 50.0 270 > th dose dependent rect. 21 7
288 70.40 precipitation 0.1 270 < th dose independent rect. 4 17
289 70.40 precipitation 0.1 270 < th dose dependent rect. 4 17
290 70.42 radiation 1.0 90 < th dose independent rect. 23 8
306 70.57 radiation 1.0 90 < th dose independent rect. 23 12
309 70.58 wind 7.0 270 < th dose independent rect. 3 8
317 70.61 radiation 40.0 270 < th dose dependent rect. 3 20
324 70.64 precipitation 0.1 270 < th dose independent rect. 3 7
335 70.64 precipitation 0.1 270 < th dose dependent rect. 3 7
344 70.68 temperature 25.0 10 > th dose independent rect. 17 18
347 70.70 precipitation 0.1 270 < th dose independent rect. 17 15
349 70.70 precipitation 0.1 270 < th dose dependent rect. 17 15
355 70.78 humidity 50.0 270 > th dose independent rect. 11 16
360 70.82 temperature 20.0 30 > th dose dependent rect. 17 18
381 70.93 wind 7.0 90 < th dose independent rect. 5 6
398 71.02 precipitation 0.1 90 < th dose independent rect. 5 6
399 71.02 precipitation 0.1 90 < th dose dependent rect. 5 6
427 71.18 atmosphere 995.0 90 > th dose independent rect. 5 6
429 71.18 temperature 10.0 90 > th dose independent rect. 11 18
437 71.23 temperature 15.0 270 > th dose independent rect. 4 17
459 71.37 wind 3.0 90 < th dose independent rect. 5 6
463 71.39 temperature 10.0 270 > th dose independent rect. 22 5
464 71.39 temperature 30.0 270 < th dose independent rect. 22 5
465 71.39 humidity 50.0 270 > th dose independent rect. 22 5
468 71.39 atmosphere 995.0 270 > th dose independent rect. 22 5
469 71.39 radiation 1.0 270 < th dose independent rect. 22 5
474 71.39 temperature 10.0 270 > th dose independent rect. 3 19
475 71.39 radiation 1.0 270 < th dose dependent rect. 22 5
484 71.42 temperature 25.0 10 > th dose dependent sin 9 NA
486 71.43 wind 9.0 270 < th dose independent rect. 22 5
491 71.46 wind 9.0 270 < th dose independent rect. 3 19
497 71.49 temperature 30.0 90 < th dose independent rect. 11 18
505 71.53 precipitation 0.1 270 < th dose independent rect. 22 5
507 71.53 precipitation 0.1 270 < th dose dependent rect. 22 5
516 71.57 atmosphere 995.0 270 > th dose independent rect. 3 7
517 71.57 atmosphere 1015.0 270 < th dose independent rect. 3 7
519 71.57 humidity 50.0 90 > th dose dependent rect. 5 6
525 71.59 temperature 10.0 270 > th dose independent rect. 21 7
526 71.59 temperature 30.0 270 < th dose independent rect. 21 7
527 71.59 humidity 50.0 270 > th dose independent rect. 21 7
530 71.59 atmosphere 995.0 270 > th dose independent rect. 21 7
531 71.59 radiation 1.0 270 < th dose independent rect. 21 7
536 71.59 temperature 30.0 270 < th dose independent rect. 11 16
539 71.59 radiation 1.0 270 < th dose dependent rect. 21 7
548 71.63 wind 9.0 270 < th dose dependent rect. 3 8
552 71.67 wind 9.0 270 < th dose independent rect. 21 7
557 71.69 wind 9.0 270 < th dose independent rect. 4 17
561 71.71 wind 9.0 90 < th dose independent rect. 11 18
575 71.79 temperature 30.0 90 < th dose independent rect. 5 6
581 71.80 humidity 90.0 30 < th dose independent rect. 17 18
629 72.04 atmosphere 995.0 90 > th dose independent rect. 11 18
637 72.06 radiation 1.0 270 > th dose independent rect. 5 2
652 72.09 radiation 1.0 90 < th dose dependent rect. 21 22
655 72.10 atmosphere 1015.0 270 < th dose independent rect. 4 17
656 72.10 humidity 50.0 270 > th dose dependent rect. 3 7
660 72.13 atmosphere 1015.0 270 < th dose independent rect. 22 5
706 72.22 radiation 40.0 270 < th dose dependent rect. 17 16
711 72.24 temperature 30.0 270 < th dose independent rect. 3 6
713 72.25 temperature 20.0 720 > th dose dependent sin 7 NA
717 72.25 humidity 60.0 10 > th dose dependent rect. 22 8
727 72.29 precipitation 0.1 270 < th dose independent rect. 14 9
729 72.29 precipitation 0.1 270 < th dose dependent rect. 14 9
808 72.46 precipitation 0.1 90 < th dose independent rect. 11 18
810 72.46 precipitation 0.1 90 < th dose dependent rect. 11 18
815 72.47 temperature 30.0 10 < th dose dependent rect. 24 17
832 72.54 radiation 40.0 270 < th dose independent rect. 13 10
833 72.55 atmosphere 995.0 270 > th dose independent rect. 11 16
835 72.56 humidity 50.0 270 > th dose independent rect. 9 19
838 72.58 precipitation 0.1 270 < th dose independent rect. 21 7
840 72.58 precipitation 0.1 270 < th dose dependent rect. 21 7
859 72.65 atmosphere 1000.0 10 > th dose independent rect. 6 5
866 72.67 humidity 60.0 10 > th dose independent rect. 6 5
875 72.70 wind 1.0 270 > th dose independent rect. 8 9
887 72.73 atmosphere 1015.0 270 < th dose independent rect. 3 19
910 72.78 wind 9.0 90 < th dose dependent rect. 5 18
941 72.87 temperature 10.0 270 > th dose dependent rect. 16 17
944 72.89 humidity 80.0 270 > th dose independent rect. 5 2
957 72.91 temperature 10.0 270 > th dose independent rect. 14 9
958 72.91 temperature 10.0 270 > th dose independent rect. 23 15
959 72.91 atmosphere 995.0 270 > th dose independent rect. 23 15
981 72.98 wind 1.0 90 > th dose independent rect. 5 6
984 72.99 temperature 30.0 10 < th dose independent rect. 6 5
992 73.01 temperature 10.0 270 > th dose independent rect. 8 9
993 73.01 atmosphere 1015.0 270 < th dose independent rect. 8 9
994 73.01 temperature 10.0 270 > th dose independent rect. 17 15