Os10g0564900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Protein kinase CK2 regulatory subunit CK2B2.
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Os10g0564900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Protein kinase CK2 regulatory subunit CK2B2.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 54.4 | 0.347 | 12.5 | -0.168 | 1.18 | 0.633 | 0.375 | -0.519 | 0.126 | 17.5 | 29.87 | 1301 | -- | -- |
| 54.95 | 0.345 | 12.5 | -0.177 | 1.17 | 0.628 | 0.371 | -- | 0.113 | 17.5 | 29.89 | 1300 | -- | -- |
| 54.74 | 0.345 | 12.5 | -0.175 | 1.19 | 0.633 | -- | -0.511 | 0.123 | 17.5 | 29.86 | 1297 | -- | -- |
| 55.26 | 0.346 | 12.5 | -0.193 | 1.17 | 0.616 | -- | -- | 0.105 | 17.4 | 29.8 | 1300 | -- | -- |
| 127.66 | 0.526 | 12.5 | -0.137 | -- | 0.673 | -- | -0.587 | 0.123 | -- | 29.19 | 1312 | -- | -- |
| 67.1 | 0.384 | 12.5 | -0.275 | 1.21 | -- | 0.29 | -- | 8.76e-06 | 17.2 | -- | -- | -- | -- |
| 67.31 | 0.384 | 12.5 | -0.274 | 1.21 | -- | -- | -- | 0.00146 | 17.1 | -- | -- | -- | -- |
| 127.55 | 0.526 | 12.5 | -0.218 | -- | 0.66 | -- | -- | 0.121 | -- | 27.34 | 1322 | -- | -- |
| 56.37 | 0.35 | 12.5 | -- | 1.19 | 0.613 | -- | -- | 0.135 | 17.5 | 29.41 | 1301 | -- | -- |
| 143.85 | 0.56 | 12.5 | -0.317 | -- | -- | -- | -- | -0.0292 | -- | -- | -- | -- | -- |
| 69.29 | 0.389 | 12.5 | -- | 1.21 | -- | -- | -- | 0.032 | 17.1 | -- | -- | -- | -- |
| 128.68 | 0.528 | 12.5 | -- | -- | 0.662 | -- | -- | 0.131 | -- | 27.15 | 1323 | -- | -- |
| 146.5 | 0.565 | 12.5 | -- | -- | -- | -- | -- | 0.00604 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 52.11 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 5 | 2 |
| 2 | 52.11 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 4 | 3 |
| 9 | 52.73 | wind | 5.0 | 90 | < th | dose dependent | rect. | 4 | 3 |
| 15 | 52.93 | wind | 3.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 21 | 53.14 | radiation | 1.0 | 30 | > th | dose independent | rect. | 5 | 2 |
| 49 | 53.30 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 5 | 2 |
| 73 | 53.46 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 4 |
| 74 | 53.46 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 75 | 53.48 | wind | 3.0 | 10 | < th | dose independent | rect. | 5 | 2 |
| 77 | 53.52 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 7 | 20 |
| 82 | 53.67 | radiation | 20.0 | 90 | < th | dose independent | rect. | 4 | 3 |
| 83 | 53.67 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 7 | 21 |
| 86 | 53.70 | temperature | 10.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 88 | 53.70 | temperature | 30.0 | 90 | < th | dose independent | rect. | 4 | 3 |
| 89 | 53.70 | humidity | 50.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 93 | 53.70 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 94 | 53.70 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 4 | 3 |
| 97 | 53.70 | temperature | 10.0 | 90 | > th | dose independent | rect. | 7 | 21 |
| 99 | 53.75 | radiation | 10.0 | 10 | < th | dose independent | rect. | 5 | 2 |
| 106 | 53.83 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 7 | 20 |
| 113 | 53.87 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 19 | 2 |
| 115 | 53.90 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 4 | 3 |
| 121 | 53.96 | radiation | 40.0 | 270 | < th | dose independent | rect. | 6 | 20 |
| 153 | 54.01 | wind | 9.0 | 90 | < th | dose independent | rect. | 7 | 21 |
| 157 | 54.06 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 14 |
| 158 | 54.06 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 14 |
| 196 | 54.26 | radiation | 30.0 | 270 | < th | dose independent | rect. | 15 | 11 |
| 208 | 54.32 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 4 | 3 |
| 254 | 54.51 | radiation | 1.0 | 30 | > th | dose independent | rect. | 14 | 17 |
| 262 | 54.59 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 14 | 17 |
| 264 | 54.59 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 14 | 17 |
| 270 | 54.63 | wind | 9.0 | 90 | < th | dose independent | rect. | 14 | 17 |
| 283 | 54.72 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 5 | 2 |
| 288 | 54.82 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 8 | 7 |
| 291 | 54.82 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 7 | 7 |
| 292 | 54.82 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 15 | 17 |
| 295 | 54.82 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 7 | 20 |
| 296 | 54.82 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 7 | 7 |
| 297 | 54.82 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 7 | 20 |
| 299 | 54.84 | temperature | 10.0 | 90 | > th | dose independent | rect. | 7 | 7 |
| 300 | 54.84 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 7 | 7 |
| 301 | 54.84 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 7 | 7 |
| 302 | 54.84 | temperature | 10.0 | 90 | > th | dose independent | rect. | 14 | 17 |
| 303 | 54.84 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 15 | 11 |
| 310 | 54.88 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 5 | 2 |
| 331 | 54.99 | wind | 9.0 | 90 | < th | dose independent | rect. | 7 | 7 |
| 334 | 55.00 | wind | 9.0 | 270 | < th | dose independent | rect. | 2 | 14 |
| 343 | 55.05 | temperature | 10.0 | 270 | > th | dose independent | rect. | 16 | 10 |
| 345 | 55.05 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 14 |
| 346 | 55.05 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 14 |
| 351 | 55.06 | temperature | 30.0 | 90 | < th | dose independent | rect. | 7 | 7 |
| 356 | 55.06 | radiation | 40.0 | 30 | < th | dose independent | rect. | 14 | 17 |
| 362 | 55.09 | wind | 9.0 | 270 | < th | dose independent | rect. | 16 | 10 |
| 378 | 55.17 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 16 | 10 |
| 380 | 55.17 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 4 | 3 |
| 381 | 55.18 | wind | 1.0 | 30 | > th | dose independent | rect. | 7 | 7 |
| 387 | 55.20 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 7 | 21 |
| 391 | 55.24 | humidity | 50.0 | 90 | > th | dose independent | rect. | 7 | 7 |
| 476 | 55.44 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 22 |
| 495 | 55.48 | radiation | 40.0 | 270 | < th | dose independent | rect. | 6 | 7 |
| 515 | 55.52 | radiation | 1.0 | 10 | < th | dose independent | sin | 12 | NA |
| 609 | 55.77 | radiation | 1.0 | 30 | > th | dose independent | rect. | 7 | 7 |
| 616 | 55.77 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 22 |
| 626 | 55.81 | humidity | 50.0 | 10 | > th | dose independent | rect. | 14 | 17 |
| 630 | 55.82 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 9 |
| 640 | 55.86 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 16 | 10 |
| 642 | 55.86 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 16 | 10 |
| 644 | 55.87 | humidity | 50.0 | 30 | > th | dose independent | rect. | 7 | 21 |
| 660 | 55.91 | radiation | 1.0 | 10 | < th | dose dependent | sin | 12 | NA |
| 684 | 55.98 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 1 |
| 701 | 56.04 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 13 |
| 720 | 56.07 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 14 | 17 |
| 751 | 56.09 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 10 | 21 |
| 752 | 56.09 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 10 | 21 |
| 759 | 56.11 | humidity | 70.0 | 720 | > th | dose independent | rect. | 17 | 1 |
| 776 | 56.16 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 7 | 7 |
| 782 | 56.18 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 8 | 5 |
| 793 | 56.22 | humidity | 70.0 | 720 | > th | dose independent | rect. | 16 | 3 |
| 794 | 56.22 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 8 | 5 |
| 806 | 56.24 | wind | 9.0 | 30 | < th | dose dependent | rect. | 7 | 21 |
| 810 | 56.26 | humidity | 80.0 | 720 | < th | dose independent | rect. | 19 | 2 |
| 845 | 56.32 | radiation | 40.0 | 270 | < th | dose independent | rect. | 7 | 3 |
| 867 | 56.35 | wind | 9.0 | 90 | < th | dose dependent | rect. | 15 | 16 |
| 876 | 56.36 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 14 |
| 881 | 56.37 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 7 | 7 |
| 911 | 56.44 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 8 | 5 |
| 915 | 56.45 | temperature | 20.0 | 270 | > th | dose independent | rect. | 17 | 9 |
| 916 | 56.45 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 1 | 12 |
| 917 | 56.45 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 23 | 14 |
| 977 | 56.51 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 11 | 19 |
| 981 | 56.51 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 11 | 19 |
| 983 | 56.52 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 3 |
| 994 | 56.54 | wind | 9.0 | 270 | < th | dose independent | rect. | 10 | 21 |