Os10g0563600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Peptide methionine sulfoxide reductase (EC 1.8.4.6) (Protein- methionine-S-oxide reductase) (Peptide Met(O) reductase).
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Os10g0563600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Peptide methionine sulfoxide reductase (EC 1.8.4.6) (Protein- methionine-S-oxide reductase) (Peptide Met(O) reductase).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26.93 | 0.244 | 13.6 | 0.0327 | 1.29 | 1.33 | 0.77 | 0.0909 | -0.145 | 8.08 | 23.94 | 1446 | -- | -- |
| 26.94 | 0.242 | 13.6 | 0.0471 | 1.29 | 1.32 | 0.767 | -- | -0.142 | 8.08 | 23.97 | 1450 | -- | -- |
| 28.67 | 0.249 | 13.6 | 0.0585 | 1.29 | 1.39 | -- | 0.141 | -0.153 | 8.06 | 23.54 | 1469 | -- | -- |
| 28.69 | 0.249 | 13.6 | 0.0759 | 1.29 | 1.37 | -- | -- | -0.146 | 8.08 | 23.63 | 1477 | -- | -- |
| 76.8 | 0.408 | 13.6 | 0.111 | -- | 1.95 | -- | 0.125 | -0.0769 | -- | 32.27 | 610 | -- | -- |
| 48.35 | 0.326 | 13.6 | -0.345 | 1.27 | -- | 0.843 | -- | -0.394 | 8.18 | -- | -- | -- | -- |
| 50.52 | 0.333 | 13.6 | -0.321 | 1.27 | -- | -- | -- | -0.395 | 8.16 | -- | -- | -- | -- |
| 76.62 | 0.408 | 13.6 | 0.172 | -- | 2 | -- | -- | -0.0634 | -- | 32.62 | 603 | -- | -- |
| 28.81 | 0.25 | 13.6 | -- | 1.28 | 1.31 | -- | -- | -0.156 | 8.07 | 23.79 | 1468 | -- | -- |
| 139.75 | 0.552 | 13.7 | -0.311 | -- | -- | -- | -- | -0.38 | -- | -- | -- | -- | -- |
| 53.23 | 0.341 | 13.6 | -- | 1.27 | -- | -- | -- | -0.359 | 8.17 | -- | -- | -- | -- |
| 77.34 | 0.41 | 13.6 | -- | -- | 1.95 | -- | -- | -0.104 | -- | 33.45 | 604 | -- | -- |
| 142.29 | 0.557 | 13.7 | -- | -- | -- | -- | -- | -0.346 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.17 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 2 | 25.46 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 3 | 25.48 | temperature | 25 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 5 | 25.49 | temperature | 25 | 1440 | < th | dose dependent | rect. | 2 | 4 |
| 9 | 25.55 | temperature | 15 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 17 | 25.59 | temperature | 15 | 1440 | > th | dose dependent | rect. | 2 | 4 |
| 28 | 25.66 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 46 | 25.75 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 12 |
| 87 | 25.86 | temperature | 25 | 1440 | < th | dose dependent | sin | 9 | NA |
| 152 | 26.12 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 159 | 26.14 | temperature | 20 | 1440 | > th | dose independent | rect. | 2 | 7 |
| 160 | 26.14 | temperature | 20 | 1440 | < th | dose independent | rect. | 2 | 7 |
| 198 | 26.25 | temperature | 20 | 1440 | > th | dose independent | sin | 8 | NA |
| 226 | 26.32 | temperature | 20 | 1440 | < th | dose independent | sin | 8 | NA |
| 232 | 26.34 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 13 |
| 254 | 26.40 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 13 |
| 269 | 26.43 | temperature | 20 | 1440 | < th | dose independent | rect. | 19 | 12 |
| 742 | 27.23 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 766 | 27.26 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 863 | 27.40 | temperature | 15 | 1440 | > th | dose dependent | sin | 10 | NA |
| 885 | 27.43 | temperature | 25 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 901 | 27.47 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 6 |
| 965 | 27.57 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |