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Os10g0563200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Armadillo-like helical domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.7 (0.0158) R2 : 0.186
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.339 (0.0332) R2dN8 : 0.241 R2N8 : 0.186
σ : 0.297
deviance : 40.48
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
18.09 0.2 11.7 0.421 0.404 0.271 0.0579 -0.354 0.429 0.451 90.55 9 -- --
18.31 0.199 11.6 0.409 0.402 0.254 -0.078 -- 0.427 0.401 90.49 13 -- --
18.1 0.198 11.7 0.417 0.403 0.272 -- -0.315 0.429 0.432 90.62 8 -- --
18.33 0.199 11.6 0.411 0.405 0.253 -- -- 0.424 0.419 90.71 8 -- --
25.84 0.238 11.6 0.398 -- 0.457 -- -0.208 0.474 -- 88 10 -- --
19.84 0.209 11.7 0.442 0.492 -- 0.00675 -- 0.381 1.07 -- -- -- --
19.84 0.209 11.7 0.442 0.492 -- -- -- 0.381 1.07 -- -- -- --
22.84 0.223 11.6 0.444 -- 0.442 -- -- 0.425 -- 69.13 5 -- --
22.7 0.222 11.7 -- 0.392 0.306 -- -- 0.389 0.293 90.52 8 -- --
34.9 0.276 11.7 0.46 -- -- -- -- 0.39 -- -- -- -- --
24.98 0.234 11.7 -- 0.5 -- -- -- 0.331 1.11 -- -- -- --
27.84 0.247 11.7 -- -- 0.449 -- -- 0.379 -- 70.24 2 -- --
40.48 0.297 11.7 -- -- -- -- -- 0.339 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 17.03 temperature 20 720 > th dose dependent rect. 4 3
2 17.04 temperature 20 270 > th dose dependent rect. 3 5
6 17.18 temperature 20 720 > th dose dependent rect. 6 1
8 17.22 temperature 30 270 < th dose independent rect. 7 22
13 17.28 temperature 25 10 > th dose independent rect. 1 10
15 17.31 temperature 25 10 > th dose independent rect. 3 8
17 17.32 wind 1 270 < th dose dependent rect. 24 1
18 17.33 temperature 30 720 < th dose independent rect. 7 5
22 17.36 temperature 15 30 > th dose dependent rect. 6 14
27 17.38 temperature 30 270 < th dose independent rect. 8 11
31 17.41 temperature 30 720 < th dose independent rect. 24 12
34 17.43 temperature 20 720 > th dose dependent rect. 23 8
44 17.47 radiation 10 720 < th dose dependent rect. 16 3
51 17.49 humidity 50 720 > th dose dependent rect. 16 3
52 17.51 temperature 30 720 < th dose independent rect. 9 3
59 17.52 humidity 60 720 > th dose independent rect. 24 19
64 17.53 humidity 70 720 < th dose dependent rect. 12 5
69 17.55 humidity 50 270 > th dose dependent rect. 16 12
70 17.56 temperature 20 270 > th dose independent rect. 4 3
73 17.57 humidity 60 720 > th dose independent rect. 7 21
77 17.58 humidity 70 270 > th dose independent rect. 17 11
82 17.58 humidity 90 720 > th dose dependent rect. 19 7
104 17.64 humidity 60 720 > th dose independent rect. 9 19
111 17.65 humidity 60 720 > th dose independent rect. 24 21
128 17.68 humidity 70 720 > th dose independent rect. 17 2
129 17.68 humidity 60 720 < th dose independent rect. 12 5
130 17.68 temperature 20 30 > th dose independent rect. 20 8
132 17.68 temperature 30 270 < th dose independent rect. 16 12
159 17.70 humidity 60 720 < th dose independent rect. 13 3
163 17.70 humidity 60 720 > th dose independent rect. 9 10
166 17.70 humidity 60 720 > th dose independent rect. 11 17
174 17.71 humidity 60 720 > th dose independent rect. 7 12
179 17.72 humidity 60 720 > th dose independent rect. 15 4
191 17.72 humidity 60 10 > th dose dependent rect. 18 12
196 17.73 humidity 60 720 > th dose independent rect. 11 8
207 17.74 humidity 60 720 > th dose independent rect. 7 14
212 17.75 radiation 1 720 < th dose independent rect. 18 1
213 17.75 humidity 90 720 < th dose independent rect. 19 5
221 17.76 temperature 30 720 < th dose independent rect. 11 1
256 17.79 humidity 90 720 < th dose independent rect. 23 1
262 17.79 humidity 90 720 > th dose dependent rect. 20 1
274 17.80 humidity 50 720 > th dose dependent rect. 9 19
278 17.81 humidity 90 720 > th dose independent rect. 20 6
302 17.83 radiation 10 1440 > th dose independent rect. 11 3
311 17.83 temperature 30 720 < th dose independent rect. 16 20
322 17.83 humidity 50 720 > th dose dependent rect. 24 19
323 17.83 humidity 50 270 > th dose dependent rect. 7 21
350 17.85 humidity 80 1440 > th dose independent rect. 11 9
364 17.85 humidity 50 720 > th dose dependent rect. 24 21
365 17.85 humidity 90 10 > th dose dependent rect. 24 22
366 17.86 atmosphere 1005 270 < th dose independent rect. 23 2
381 17.87 humidity 80 1440 < th dose independent rect. 11 9
408 17.88 humidity 60 10 > th dose dependent rect. 11 19
419 17.89 humidity 50 720 > th dose dependent rect. 9 10
421 17.89 temperature 15 30 > th dose dependent rect. 6 12
427 17.89 humidity 90 720 > th dose dependent rect. 8 18
431 17.90 humidity 90 1440 > th dose independent rect. 20 2
434 17.90 temperature 30 720 > th dose independent rect. 8 6
440 17.90 temperature 20 30 > th dose independent rect. 18 10
466 17.91 radiation 10 720 < th dose independent rect. 16 3
474 17.91 temperature 30 270 < th dose independent rect. 21 22
486 17.91 humidity 50 720 > th dose dependent rect. 7 14
492 17.91 temperature 25 10 > th dose dependent rect. 13 23
506 17.92 humidity 50 720 > th dose dependent rect. 11 8
511 17.92 humidity 50 720 > th dose dependent rect. 9 12
519 17.93 humidity 90 1440 < th dose independent rect. 20 1
526 17.93 humidity 70 10 > th dose independent rect. 18 12
537 17.93 atmosphere 1005 10 > th dose dependent rect. 12 11
659 17.96 humidity 90 720 > th dose dependent rect. 23 3
687 17.97 humidity 70 90 > th dose independent rect. 11 18
698 17.97 radiation 10 720 < th dose dependent rect. 16 11
699 17.97 humidity 50 720 > th dose dependent rect. 7 12
707 17.97 radiation 1 720 < th dose dependent rect. 24 19
710 17.98 humidity 80 1440 < th dose independent rect. 17 1
711 17.98 humidity 80 1440 > th dose independent rect. 11 3
717 17.98 temperature 30 720 < th dose independent rect. 24 19
738 17.99 radiation 20 10 < th dose independent rect. 6 4
742 17.99 temperature 30 720 < th dose independent rect. 3 8
772 18.00 humidity 60 720 > th dose independent rect. 15 22
780 18.00 humidity 70 1440 > th dose dependent rect. 11 10
793 18.00 temperature 25 30 > th dose dependent rect. 19 23
794 18.01 temperature 30 720 > th dose independent sin 8 NA
807 18.01 temperature 30 720 < th dose independent rect. 20 16
813 18.01 radiation 1 90 < th dose independent rect. 20 23
814 18.01 humidity 70 720 < th dose dependent sin 19 NA
834 18.02 humidity 60 720 > th dose independent sin 18 NA
851 18.02 humidity 90 10 < th dose independent rect. 23 10
890 18.03 wind 1 270 < th dose independent rect. 24 1
891 18.03 humidity 80 1440 < th dose independent rect. 11 3
974 18.04 atmosphere 1005 30 > th dose independent rect. 23 10