Os10g0562700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF630 domain containing protein.
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Os10g0562700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF630 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 106.89 | 0.486 | 8.54 | -0.77 | 0.517 | -1.16 | -1.22 | -0.602 | -0.472 | 8.77 | 25.96 | 7 | -- | -- |
| 107.38 | 0.486 | 8.55 | -0.872 | 0.52 | -1.14 | -1.11 | -- | -0.498 | 8.57 | 26.2 | 6 | -- | -- |
| 111.31 | 0.495 | 8.55 | -0.888 | 0.521 | -1.16 | -- | -0.14 | -0.495 | 8.54 | 26.1 | 4 | -- | -- |
| 111.34 | 0.495 | 8.55 | -0.91 | 0.521 | -1.15 | -- | -- | -0.5 | 8.56 | 26.1 | 4 | -- | -- |
| 126.22 | 0.526 | 8.56 | -0.906 | -- | -1.29 | -- | -0.197 | -0.513 | -- | 25.9 | 2 | -- | -- |
| 127.67 | 0.53 | 8.49 | -0.606 | 0.645 | -- | -0.96 | -- | -0.25 | 10.1 | -- | -- | -- | -- |
| 131.25 | 0.536 | 8.49 | -0.642 | 0.648 | -- | -- | -- | -0.252 | 10.3 | -- | -- | -- | -- |
| 126.29 | 0.526 | 8.57 | -0.937 | -- | -1.28 | -- | -- | -0.52 | -- | 25.9 | 2 | -- | -- |
| 131.26 | 0.537 | 8.51 | -- | 0.546 | -0.811 | -- | -- | -0.333 | 9.3 | 25.97 | 6 | -- | -- |
| 156.83 | 0.585 | 8.51 | -0.652 | -- | -- | -- | -- | -0.253 | -- | -- | -- | -- | -- |
| 142.11 | 0.558 | 8.47 | -- | 0.652 | -- | -- | -- | -0.18 | 10.4 | -- | -- | -- | -- |
| 147.89 | 0.568 | 8.53 | -- | -- | -0.999 | -- | -- | -0.366 | -- | 26.1 | 2 | -- | -- |
| 168.04 | 0.605 | 8.49 | -- | -- | -- | -- | -- | -0.181 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 97.56 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 20 |
| 2 | 97.75 | temperature | 30 | 270 | < th | dose dependent | rect. | 12 | 18 |
| 3 | 97.82 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 20 |
| 8 | 98.26 | temperature | 25 | 270 | < th | dose independent | rect. | 12 | 18 |
| 11 | 98.52 | temperature | 25 | 270 | < th | dose independent | rect. | 11 | 20 |
| 83 | 102.82 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 9 |
| 148 | 105.03 | temperature | 25 | 720 | < th | dose dependent | rect. | 12 | 9 |
| 165 | 105.36 | temperature | 25 | 720 | > th | dose independent | rect. | 11 | 10 |
| 169 | 105.43 | temperature | 25 | 720 | < th | dose independent | rect. | 12 | 9 |
| 271 | 106.52 | temperature | 25 | 270 | < th | dose independent | sin | 15 | NA |
| 332 | 107.05 | temperature | 25 | 270 | > th | dose independent | sin | 15 | NA |
| 341 | 107.11 | temperature | 25 | 270 | > th | dose independent | rect. | 17 | 12 |
| 345 | 107.14 | temperature | 20 | 720 | > th | dose dependent | rect. | 11 | 10 |
| 372 | 107.31 | temperature | 25 | 10 | < th | dose dependent | rect. | 10 | 22 |
| 378 | 107.35 | temperature | 15 | 90 | > th | dose dependent | rect. | 9 | 16 |
| 380 | 107.38 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 395 | 107.50 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 2 |
| 399 | 107.51 | radiation | 10 | 90 | < th | dose dependent | rect. | 7 | 10 |
| 427 | 107.70 | temperature | 25 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 448 | 107.79 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 454 | 107.82 | temperature | 25 | 720 | > th | dose independent | sin | 20 | NA |
| 461 | 107.88 | temperature | 25 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 462 | 107.89 | temperature | 25 | 720 | < th | dose independent | sin | 19 | NA |
| 469 | 107.93 | temperature | 25 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 475 | 107.96 | temperature | 25 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 480 | 107.99 | temperature | 25 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 481 | 107.99 | temperature | 25 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 491 | 108.03 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 499 | 108.08 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 16 |
| 533 | 108.23 | temperature | 20 | 270 | > th | dose dependent | sin | 14 | NA |
| 543 | 108.28 | temperature | 25 | 270 | < th | dose dependent | sin | 17 | NA |
| 571 | 108.41 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 591 | 108.52 | humidity | 60 | 270 | > th | dose dependent | rect. | 11 | 6 |
| 601 | 108.57 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 21 |
| 615 | 108.61 | humidity | 60 | 10 | > th | dose dependent | rect. | 12 | 6 |
| 641 | 108.72 | radiation | 10 | 90 | < th | dose dependent | rect. | 12 | 5 |
| 673 | 108.83 | humidity | 70 | 10 | > th | dose dependent | rect. | 6 | 12 |
| 682 | 108.87 | temperature | 30 | 720 | < th | dose dependent | sin | 20 | NA |
| 698 | 108.94 | radiation | 1 | 270 | < th | dose independent | rect. | 5 | 13 |
| 707 | 108.97 | radiation | 1 | 270 | < th | dose independent | rect. | 7 | 11 |
| 718 | 109.01 | radiation | 1 | 90 | < th | dose independent | rect. | 10 | 7 |
| 722 | 109.05 | temperature | 25 | 10 | < th | dose dependent | sin | 16 | NA |
| 755 | 109.16 | temperature | 15 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 768 | 109.20 | temperature | 15 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 806 | 109.31 | humidity | 80 | 10 | > th | dose independent | rect. | 8 | 11 |
| 825 | 109.38 | temperature | 20 | 10 | > th | dose dependent | sin | 13 | NA |
| 850 | 109.47 | temperature | 25 | 270 | > th | dose independent | rect. | 10 | 19 |
| 865 | 109.51 | humidity | 70 | 10 | > th | dose dependent | sin | 23 | NA |
| 885 | 109.56 | temperature | 10 | 270 | > th | dose dependent | rect. | 16 | 22 |
| 941 | 109.71 | radiation | 1 | 270 | < th | dose dependent | rect. | 5 | 13 |
| 950 | 109.73 | temperature | 20 | 720 | > th | dose dependent | sin | 19 | NA |
| 957 | 109.75 | radiation | 10 | 10 | < th | dose dependent | rect. | 6 | 11 |
| 968 | 109.78 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 23 |