Os10g0561500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os10g0561500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein kinase-like domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 202.1 | 0.668 | 5.67 | -2.25 | 1.13 | -2.26 | 0.181 | -1.17 | -0.729 | 2.49 | 28.4 | 266 | -- | -- |
| 203.71 | 0.665 | 5.69 | -2.42 | 1.12 | -2.22 | -0.12 | -- | -0.762 | 2.49 | 28.75 | 271 | -- | -- |
| 202.06 | 0.662 | 5.68 | -2.26 | 1.1 | -2.25 | -- | -1.12 | -0.738 | 2.46 | 28.01 | 275 | -- | -- |
| 203.58 | 0.665 | 5.7 | -2.46 | 1.11 | -2.22 | -- | -- | -0.782 | 2.51 | 28.37 | 274 | -- | -- |
| 212.36 | 0.679 | 5.66 | -2.26 | -- | -2.31 | -- | -1.4 | -0.724 | -- | 28.43 | 978 | -- | -- |
| 271.7 | 0.773 | 5.6 | -1.89 | 0.642 | -- | -0.104 | -- | -0.304 | 0.552 | -- | -- | -- | -- |
| 271.74 | 0.772 | 5.6 | -1.89 | 0.642 | -- | -- | -- | -0.303 | 0.531 | -- | -- | -- | -- |
| 213.92 | 0.681 | 5.68 | -2.54 | -- | -2.25 | -- | -- | -0.722 | -- | 31.43 | 996 | -- | -- |
| 345.33 | 0.865 | 5.59 | -- | 0.799 | -1.16 | -- | -- | -0.31 | 1.82 | 28.41 | 291 | -- | -- |
| 297.64 | 0.806 | 5.59 | -1.87 | -- | -- | -- | -- | -0.292 | -- | -- | -- | -- | -- |
| 365.7 | 0.895 | 5.55 | -- | 0.615 | -- | -- | -- | -0.0927 | 0.38 | -- | -- | -- | -- |
| 361.03 | 0.885 | 5.58 | -- | -- | -1.25 | -- | -- | -0.249 | -- | 36.13 | 921 | -- | -- |
| 389.46 | 0.921 | 5.54 | -- | -- | -- | -- | -- | -0.0852 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 200.16 | temperature | 10 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 2 | 200.32 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 21 |
| 5 | 200.78 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 23 |
| 9 | 201.24 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 8 |
| 10 | 201.26 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 8 |
| 12 | 201.34 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 6 |
| 18 | 201.41 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 11 |
| 22 | 201.44 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 20 |
| 54 | 201.81 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 16 |
| 83 | 202.02 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 98 | 202.11 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 111 | 202.20 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 127 | 202.29 | temperature | 30 | 720 | < th | dose dependent | rect. | 4 | 22 |
| 131 | 202.32 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 134 | 202.34 | temperature | 10 | 1440 | > th | dose dependent | sin | 11 | NA |
| 142 | 202.40 | temperature | 30 | 1440 | < th | dose dependent | sin | 12 | NA |
| 205 | 202.67 | temperature | 30 | 270 | < th | dose dependent | rect. | 20 | 23 |
| 354 | 203.50 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 4 |
| 399 | 203.70 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 596 | 204.47 | temperature | 25 | 1440 | < th | dose dependent | rect. | 10 | 21 |
| 689 | 204.76 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 9 |
| 715 | 204.84 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 9 |
| 769 | 205.03 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 10 |
| 780 | 205.06 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 799 | 205.10 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 829 | 205.22 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 4 |
| 842 | 205.25 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 852 | 205.28 | temperature | 25 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 872 | 205.34 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 13 |
| 892 | 205.39 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 23 |
| 944 | 205.54 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 6 |