Os10g0560000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF828, plant family protein.
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Os10g0560000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF828, plant family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 346.67 | 0.875 | 7.46 | -1.18 | 0.0512 | -3.61 | 3.1 | 1.43 | 0.455 | 0.00614 | 24.1 | 10 | -- | -- |
| 349 | 0.87 | 7.43 | -0.973 | 0.0896 | -3.81 | 3.53 | -- | 0.515 | 0.248 | 23.88 | 10 | -- | -- |
| 367.89 | 0.9 | 7.53 | -1.75 | 0.512 | -3.35 | -- | 4.21 | 0.222 | 5.3 | 25.13 | 10 | -- | -- |
| 394.02 | 0.925 | 7.44 | -1.12 | 0.405 | -3.83 | -- | -- | 0.418 | 5.2 | 24.05 | 10 | -- | -- |
| 378.24 | 0.906 | 7.51 | -1.62 | -- | -3.35 | -- | 3.9 | 0.362 | -- | 24.2 | 10 | -- | -- |
| 549.77 | 1.1 | 7.29 | -0.127 | 0.574 | -- | -3.56 | -- | 1.1 | 11.4 | -- | -- | -- | -- |
| 602.64 | 1.15 | 7.29 | -0.278 | 0.622 | -- | -- | -- | 1.08 | 10.3 | -- | -- | -- | -- |
| 403.03 | 0.935 | 7.44 | -1.1 | -- | -3.81 | -- | -- | 0.507 | -- | 23.78 | 10 | -- | -- |
| 424.91 | 0.96 | 7.39 | -- | 0.384 | -3.51 | -- | -- | 0.671 | 6.36 | 23.67 | 10 | -- | -- |
| 626.13 | 1.17 | 7.31 | -0.287 | -- | -- | -- | -- | 1.08 | -- | -- | -- | -- | -- |
| 604.67 | 1.15 | 7.28 | -- | 0.623 | -- | -- | -- | 1.11 | 10.3 | -- | -- | -- | -- |
| 432.7 | 0.969 | 7.4 | -- | -- | -3.48 | -- | -- | 0.687 | -- | 23.62 | 10 | -- | -- |
| 628.3 | 1.17 | 7.3 | -- | -- | -- | -- | -- | 1.11 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 327.82 | wind | 5 | 43200 | < th | dose independent | rect. | 14 | 11 |
| 2 | 328.32 | wind | 5 | 43200 | > th | dose independent | rect. | 14 | 11 |
| 8 | 329.74 | wind | 5 | 14400 | < th | dose independent | rect. | 6 | 11 |
| 9 | 329.93 | wind | 5 | 14400 | > th | dose independent | rect. | 6 | 12 |
| 33 | 332.13 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 34 | 332.23 | wind | 3 | 43200 | > th | dose dependent | rect. | 14 | 11 |
| 39 | 332.41 | wind | 5 | 14400 | > th | dose independent | sin | 23 | NA |
| 40 | 332.48 | wind | 5 | 14400 | > th | dose independent | rect. | 9 | 7 |
| 41 | 332.50 | wind | 5 | 14400 | < th | dose independent | rect. | 9 | 7 |
| 53 | 333.31 | wind | 5 | 14400 | < th | dose independent | sin | 23 | NA |
| 60 | 333.66 | wind | 3 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 72 | 334.31 | wind | 5 | 14400 | > th | dose independent | rect. | 5 | 16 |
| 98 | 335.62 | wind | 5 | 14400 | < th | dose independent | rect. | 5 | 16 |
| 162 | 338.35 | wind | 5 | 14400 | > th | dose independent | rect. | 9 | 16 |
| 202 | 339.55 | wind | 5 | 43200 | < th | dose independent | sin | 17 | NA |
| 231 | 340.40 | wind | 9 | 43200 | < th | dose dependent | rect. | 13 | 10 |
| 254 | 341.01 | wind | 5 | 14400 | < th | dose independent | rect. | 9 | 16 |
| 266 | 341.29 | wind | 5 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 270 | 341.41 | wind | 9 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 272 | 341.44 | wind | 3 | 43200 | > th | dose dependent | sin | 17 | NA |
| 276 | 341.47 | humidity | 80 | 43200 | < th | dose dependent | rect. | 20 | 16 |
| 280 | 341.51 | wind | 5 | 43200 | > th | dose independent | sin | 17 | NA |
| 295 | 341.71 | wind | 1 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 304 | 341.85 | wind | 5 | 14400 | > th | dose independent | rect. | 11 | 20 |
| 306 | 341.95 | wind | 5 | 14400 | > th | dose independent | rect. | 24 | 21 |
| 334 | 342.61 | wind | 5 | 14400 | < th | dose independent | rect. | 24 | 21 |
| 346 | 342.86 | wind | 5 | 14400 | < th | dose independent | rect. | 5 | 20 |
| 350 | 342.93 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 11 |
| 371 | 343.23 | wind | 5 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 390 | 343.62 | wind | 5 | 14400 | < th | dose independent | rect. | 10 | 21 |
| 405 | 343.77 | wind | 3 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 485 | 345.22 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 492 | 345.39 | humidity | 80 | 43200 | < th | dose independent | rect. | 20 | 4 |
| 500 | 345.52 | wind | 9 | 43200 | < th | dose dependent | rect. | 18 | 3 |
| 514 | 345.86 | humidity | 80 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 577 | 346.88 | humidity | 80 | 43200 | > th | dose independent | rect. | 20 | 4 |
| 598 | 347.34 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 602 | 347.40 | wind | 5 | 14400 | > th | dose independent | rect. | 20 | 22 |
| 604 | 347.42 | wind | 9 | 43200 | < th | dose dependent | sin | 18 | NA |
| 621 | 347.68 | wind | 1 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 645 | 348.03 | wind | 5 | 14400 | < th | dose independent | rect. | 20 | 22 |
| 646 | 348.04 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 672 | 348.48 | humidity | 80 | 43200 | < th | dose dependent | sin | 8 | NA |
| 693 | 348.78 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 802 | 350.52 | humidity | 80 | 43200 | < th | dose dependent | rect. | 20 | 2 |
| 824 | 350.83 | temperature | 25 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 828 | 350.87 | humidity | 80 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 830 | 350.89 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 842 | 351.04 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 845 | 351.07 | wind | 5 | 14400 | > th | dose independent | no | NA | NA |
| 849 | 351.12 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 853 | 351.16 | temperature | 25 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 854 | 351.16 | temperature | 25 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 869 | 351.30 | temperature | 25 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 877 | 351.41 | temperature | 25 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 887 | 351.57 | temperature | 25 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 903 | 351.79 | temperature | 25 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 929 | 352.26 | wind | 5 | 14400 | < th | dose independent | no | NA | NA |
| 934 | 352.30 | temperature | 25 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 946 | 352.52 | wind | 5 | 14400 | > th | dose dependent | rect. | 5 | 16 |
| 963 | 352.75 | temperature | 25 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 966 | 352.79 | temperature | 25 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 981 | 353.01 | wind | 5 | 43200 | < th | dose independent | rect. | 19 | 1 |