Os10g0559600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Agenet domain containing protein.
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Os10g0559600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Agenet domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21.97 | 0.22 | 13 | 0.996 | 0.22 | -0.038 | -0.397 | 1.41 | 0.354 | 15.6 | 19.3 | 1690 | -- | -- |
| 24.47 | 0.232 | 13 | 0.787 | 0.239 | -0.333 | -0.474 | -- | 0.294 | 15.4 | 18.41 | 3003 | -- | -- |
| 22.43 | 0.221 | 13 | 0.987 | 0.219 | -0.0394 | -- | 1.4 | 0.351 | 15.8 | 19.35 | 1667 | -- | -- |
| 24.4 | 0.23 | 13 | 0.874 | 0.198 | -0.425 | -- | -- | 0.332 | 16 | 18.1 | 2774 | -- | -- |
| 25.05 | 0.233 | 13 | 0.975 | -- | -0.0473 | -- | 1.38 | 0.345 | -- | 19.39 | 1597 | -- | -- |
| 26.12 | 0.24 | 13 | 0.707 | 0.22 | -- | -0.384 | -- | 0.267 | 15.8 | -- | -- | -- | -- |
| 26.55 | 0.241 | 13 | 0.701 | 0.219 | -- | -- | -- | 0.265 | 16 | -- | -- | -- | -- |
| 26.51 | 0.24 | 13 | 0.882 | -- | -0.465 | -- | -- | 0.336 | -- | 18 | 2689 | -- | -- |
| 28.1 | 0.247 | 13.1 | -- | 0.221 | 0.492 | -- | -- | 0.0301 | 16.1 | 22.26 | 47520 | -- | -- |
| 29.16 | 0.252 | 13 | 0.692 | -- | -- | -- | -- | 0.259 | -- | -- | -- | -- | -- |
| 39.51 | 0.294 | 13.1 | -- | 0.205 | -- | -- | -- | 0.187 | 16 | -- | -- | -- | -- |
| 30.77 | 0.258 | 13.1 | -- | -- | 0.486 | -- | -- | 0.013 | -- | 22.07 | 47520 | -- | -- |
| 41.8 | 0.302 | 13.1 | -- | -- | -- | -- | -- | 0.183 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20.96 | humidity | 90 | 14400 | < th | dose independent | rect. | 23 | 9 |
| 2 | 20.97 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 9 |
| 10 | 21.05 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 2 |
| 26 | 21.21 | humidity | 90 | 14400 | > th | dose independent | rect. | 21 | 7 |
| 30 | 21.23 | humidity | 90 | 14400 | > th | dose independent | rect. | 22 | 5 |
| 32 | 21.25 | humidity | 90 | 14400 | < th | dose independent | rect. | 23 | 2 |
| 35 | 21.26 | wind | 1 | 43200 | < th | dose independent | rect. | 2 | 2 |
| 48 | 21.31 | wind | 1 | 43200 | > th | dose independent | rect. | 2 | 2 |
| 51 | 21.31 | humidity | 80 | 14400 | > th | dose dependent | rect. | 24 | 7 |
| 67 | 21.36 | humidity | 80 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 69 | 21.37 | humidity | 90 | 14400 | > th | dose independent | sin | 10 | NA |
| 96 | 21.43 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 3 |
| 107 | 21.46 | humidity | 90 | 14400 | < th | dose independent | sin | 10 | NA |
| 119 | 21.48 | radiation | 1 | 4320 | > th | dose independent | rect. | 18 | 11 |
| 128 | 21.51 | humidity | 90 | 14400 | > th | dose independent | rect. | 3 | 5 |
| 151 | 21.57 | radiation | 1 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 170 | 21.59 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 187 | 21.63 | wind | 1 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 212 | 21.68 | radiation | 1 | 4320 | < th | dose independent | rect. | 18 | 11 |
| 216 | 21.68 | radiation | 10 | 90 | < th | dose independent | rect. | 24 | 14 |
| 223 | 21.70 | humidity | 90 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 228 | 21.70 | temperature | 15 | 270 | > th | dose dependent | rect. | 11 | 18 |
| 246 | 21.74 | radiation | 1 | 4320 | < th | dose independent | rect. | 18 | 7 |
| 249 | 21.74 | radiation | 10 | 10 | < th | dose independent | rect. | 24 | 15 |
| 254 | 21.75 | humidity | 90 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 259 | 21.75 | humidity | 90 | 14400 | > th | dose dependent | sin | 7 | NA |
| 280 | 21.76 | temperature | 15 | 10 | > th | dose dependent | rect. | 13 | 18 |
| 306 | 21.80 | radiation | 1 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 328 | 21.81 | temperature | 15 | 270 | > th | dose dependent | rect. | 13 | 15 |
| 347 | 21.83 | radiation | 1 | 14400 | < th | dose dependent | rect. | 23 | 6 |
| 349 | 21.83 | radiation | 1 | 14400 | < th | dose dependent | rect. | 20 | 9 |
| 352 | 21.83 | humidity | 90 | 14400 | > th | dose dependent | rect. | 17 | 14 |
| 370 | 21.85 | radiation | 10 | 90 | < th | dose independent | rect. | 24 | 10 |
| 374 | 21.85 | temperature | 15 | 10 | > th | dose dependent | sin | 14 | NA |
| 411 | 21.89 | radiation | 10 | 10 | < th | dose independent | rect. | 24 | 23 |
| 420 | 21.90 | radiation | 10 | 90 | < th | dose independent | rect. | 24 | 17 |
| 422 | 21.90 | humidity | 50 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 471 | 21.93 | temperature | 30 | 270 | < th | dose dependent | rect. | 17 | 16 |
| 489 | 21.95 | temperature | 15 | 10 | > th | dose dependent | rect. | 16 | 15 |
| 518 | 21.98 | temperature | 20 | 14400 | > th | dose independent | rect. | 12 | 2 |
| 519 | 21.98 | temperature | 20 | 14400 | < th | dose independent | rect. | 12 | 2 |
| 549 | 22.00 | radiation | 40 | 43200 | < th | dose dependent | rect. | 24 | 5 |
| 571 | 22.02 | temperature | 20 | 14400 | < th | dose independent | rect. | 11 | 5 |
| 583 | 22.03 | humidity | 90 | 43200 | > th | dose independent | rect. | 10 | 2 |
| 584 | 22.03 | temperature | 20 | 14400 | > th | dose independent | rect. | 11 | 5 |
| 591 | 22.03 | temperature | 20 | 14400 | < th | dose dependent | rect. | 11 | 2 |
| 619 | 22.04 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 654 | 22.06 | temperature | 20 | 30 | > th | dose independent | rect. | 13 | 18 |
| 672 | 22.06 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 12 |
| 686 | 22.07 | temperature | 30 | 720 | < th | dose dependent | sin | 15 | NA |
| 716 | 22.08 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 9 |
| 738 | 22.09 | radiation | 1 | 4320 | < th | dose dependent | rect. | 18 | 7 |
| 771 | 22.10 | radiation | 20 | 90 | < th | dose dependent | rect. | 24 | 14 |
| 786 | 22.11 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 815 | 22.12 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 816 | 22.12 | radiation | 1 | 4320 | < th | dose dependent | rect. | 18 | 1 |
| 860 | 22.14 | temperature | 20 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 893 | 22.15 | temperature | 30 | 720 | < th | dose dependent | rect. | 12 | 18 |
| 898 | 22.16 | temperature | 20 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 912 | 22.16 | temperature | 10 | 720 | > th | dose dependent | sin | 14 | NA |
| 923 | 22.16 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 10 |
| 924 | 22.16 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 10 |
| 940 | 22.17 | temperature | 15 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 944 | 22.17 | temperature | 20 | 30 | > th | dose independent | rect. | 24 | 7 |
| 955 | 22.17 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 4 |
| 956 | 22.17 | temperature | 20 | 14400 | < th | dose dependent | rect. | 14 | 6 |
| 963 | 22.17 | radiation | 40 | 43200 | > th | dose dependent | rect. | 15 | 17 |
| 979 | 22.18 | temperature | 20 | 270 | > th | dose independent | rect. | 11 | 18 |
| 986 | 22.18 | humidity | 90 | 43200 | > th | dose dependent | rect. | 10 | 2 |
| 988 | 22.18 | temperature | 20 | 14400 | < th | dose dependent | rect. | 16 | 4 |