Os10g0559200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0559200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 175.32 | 0.622 | 10.2 | -2.35 | 1.62 | 0.121 | 0.0749 | 3.6 | 0.261 | 9.26 | 90.32 | 90 | -- | -- |
| 200.99 | 0.66 | 10.2 | -2.22 | 1.6 | 0.477 | -0.281 | -- | 0.317 | 9.22 | 93.03 | 85 | -- | -- |
| 175.31 | 0.617 | 10.2 | -2.34 | 1.61 | 0.136 | -- | 3.63 | 0.264 | 9.27 | 90.49 | 98 | -- | -- |
| 200.94 | 0.66 | 10.2 | -2.23 | 1.59 | 0.584 | -- | -- | 0.332 | 9.28 | 93.25 | 58 | -- | -- |
| 310.5 | 0.821 | 10.2 | -2.27 | -- | 1.11 | -- | 6.09 | 0.346 | -- | 93.96 | 150 | -- | -- |
| 205.84 | 0.673 | 10.2 | -2.18 | 1.65 | -- | -0.157 | -- | 0.264 | 8.88 | -- | -- | -- | -- |
| 205.92 | 0.672 | 10.2 | -2.18 | 1.65 | -- | -- | -- | 0.264 | 8.86 | -- | -- | -- | -- |
| 340.09 | 0.859 | 10.3 | -2.26 | -- | 1.18 | -- | -- | 0.381 | -- | 93.56 | 168 | -- | -- |
| 330.24 | 0.846 | 10.2 | -- | 1.61 | 0.286 | -- | -- | 0.529 | 9.12 | 93.67 | 68 | -- | -- |
| 360.76 | 0.888 | 10.3 | -2.18 | -- | -- | -- | -- | 0.276 | -- | -- | -- | -- | -- |
| 331.34 | 0.851 | 10.2 | -- | 1.64 | -- | -- | -- | 0.507 | 8.96 | -- | -- | -- | -- |
| 457.38 | 0.996 | 10.2 | -- | -- | 0.764 | -- | -- | 0.624 | -- | 81.55 | 579 | -- | -- |
| 486.23 | 1.03 | 10.2 | -- | -- | -- | -- | -- | 0.518 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 167.29 | humidity | 50 | 720 | > th | dose dependent | rect. | 16 | 10 |
| 3 | 167.42 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 17 |
| 7 | 167.53 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 10 |
| 8 | 167.54 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 8 |
| 14 | 167.58 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 17 |
| 36 | 167.70 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 8 |
| 37 | 167.70 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 10 |
| 84 | 168.29 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 8 |
| 163 | 168.68 | radiation | 1 | 1440 | < th | dose dependent | sin | 18 | NA |
| 165 | 168.74 | radiation | 1 | 1440 | < th | dose independent | sin | 17 | NA |
| 199 | 169.24 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 9 |
| 211 | 169.30 | radiation | 1 | 1440 | > th | dose independent | sin | 17 | NA |
| 221 | 169.78 | wind | 7 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 223 | 169.80 | wind | 7 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 227 | 169.81 | wind | 5 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 228 | 169.85 | humidity | 80 | 720 | < th | dose dependent | rect. | 18 | 4 |
| 272 | 170.14 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 22 |
| 316 | 171.22 | wind | 7 | 43200 | < th | dose independent | rect. | 14 | 5 |
| 336 | 171.58 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 355 | 171.76 | wind | 7 | 43200 | > th | dose independent | rect. | 14 | 5 |
| 375 | 172.09 | temperature | 30 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 406 | 172.38 | humidity | 60 | 720 | > th | dose dependent | rect. | 17 | 4 |
| 457 | 172.93 | humidity | 50 | 720 | > th | dose dependent | sin | 15 | NA |
| 494 | 173.09 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 9 |
| 560 | 173.50 | wind | 5 | 14400 | > th | dose independent | rect. | 11 | 5 |
| 585 | 173.71 | radiation | 1 | 720 | < th | dose dependent | rect. | 21 | 22 |
| 592 | 173.77 | humidity | 70 | 720 | < th | dose independent | rect. | 18 | 2 |
| 614 | 173.81 | radiation | 1 | 1440 | > th | dose independent | rect. | 13 | 3 |
| 616 | 173.81 | wind | 5 | 14400 | > th | dose independent | rect. | 10 | 8 |
| 617 | 173.81 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 10 |
| 632 | 173.94 | radiation | 1 | 720 | < th | dose independent | rect. | 5 | 22 |
| 636 | 173.97 | wind | 5 | 14400 | < th | dose independent | rect. | 11 | 5 |
| 667 | 174.13 | radiation | 1 | 1440 | > th | dose independent | rect. | 14 | 1 |
| 681 | 174.18 | temperature | 30 | 720 | > th | dose independent | rect. | 18 | 1 |
| 730 | 174.37 | wind | 5 | 14400 | < th | dose independent | rect. | 10 | 8 |
| 762 | 174.52 | humidity | 90 | 90 | > th | dose dependent | rect. | 1 | 23 |
| 775 | 174.63 | humidity | 80 | 720 | > th | dose independent | rect. | 17 | 5 |
| 782 | 174.66 | humidity | 80 | 720 | > th | dose independent | rect. | 11 | 15 |
| 791 | 174.69 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 14 |
| 812 | 174.72 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 4 |
| 815 | 174.72 | humidity | 90 | 90 | > th | dose dependent | rect. | 10 | 22 |
| 886 | 175.02 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 14 |
| 890 | 175.04 | temperature | 25 | 1440 | > th | dose independent | rect. | 11 | 11 |
| 900 | 175.07 | temperature | 25 | 1440 | < th | dose independent | rect. | 11 | 12 |
| 930 | 175.17 | humidity | 90 | 90 | > th | dose dependent | rect. | 16 | 22 |
| 940 | 175.21 | humidity | 90 | 90 | > th | dose dependent | rect. | 16 | 20 |
| 973 | 175.33 | humidity | 90 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 981 | 175.35 | temperature | 25 | 1440 | > th | dose dependent | sin | 17 | NA |
| 982 | 175.35 | humidity | 90 | 90 | > th | dose dependent | no | NA | NA |
| 983 | 175.35 | humidity | 90 | 90 | > th | dose dependent | rect. | 13 | 23 |