Os10g0558900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : 2OG-Fe(II) oxygenase domain containing protein.
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Os10g0558900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : 2OG-Fe(II) oxygenase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 167.88 | 0.609 | 7.28 | -3.9 | 1.03 | 1.66 | -0.627 | -3.2 | 0.0978 | 8.85 | 19.93 | 1402 | -- | -- |
| 176.47 | 0.619 | 7.18 | -3.05 | 1.01 | 1.74 | -0.516 | -- | 0.33 | 9.04 | 17.9 | 1334 | -- | -- |
| 169.2 | 0.606 | 7.28 | -3.91 | 1.03 | 1.66 | -- | -3.17 | 0.1 | 8.81 | 19.95 | 1401 | -- | -- |
| 177.08 | 0.62 | 7.17 | -3.01 | 1.06 | 1.67 | -- | -- | 0.354 | 9.04 | 18.3 | 1295 | -- | -- |
| 228.95 | 0.705 | 7.3 | -3.86 | -- | 1.65 | -- | -3.01 | 0.123 | -- | 19.31 | 1441 | -- | -- |
| 245.15 | 0.734 | 7.09 | -2.4 | 1.02 | -- | -0.581 | -- | 0.711 | 8.4 | -- | -- | -- | -- |
| 246.21 | 0.735 | 7.09 | -2.42 | 1.02 | -- | -- | -- | 0.711 | 8.36 | -- | -- | -- | -- |
| 237.22 | 0.717 | 7.19 | -3.01 | -- | 1.62 | -- | -- | 0.361 | -- | 18 | 1421 | -- | -- |
| 388.82 | 0.918 | 7.07 | -- | 1.07 | 0.685 | -- | -- | 0.882 | 8.52 | 20 | 982 | -- | -- |
| 304.22 | 0.815 | 7.11 | -2.42 | -- | -- | -- | -- | 0.722 | -- | -- | -- | -- | -- |
| 400.81 | 0.937 | 7.03 | -- | 1.01 | -- | -- | -- | 0.981 | 8.54 | -- | -- | -- | -- |
| 443.49 | 0.981 | 7.08 | -- | -- | 0.608 | -- | -- | 0.874 | -- | 21.8 | 1402 | -- | -- |
| 458.18 | 0.999 | 7.05 | -- | -- | -- | -- | -- | 0.99 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 158.67 | wind | 5 | 43200 | > th | dose independent | rect. | 10 | 7 |
| 2 | 158.71 | wind | 5 | 43200 | < th | dose independent | rect. | 9 | 8 |
| 6 | 159.13 | wind | 5 | 43200 | > th | dose independent | sin | 20 | NA |
| 8 | 159.22 | wind | 5 | 43200 | < th | dose independent | sin | 21 | NA |
| 14 | 159.40 | wind | 5 | 43200 | > th | dose independent | rect. | 13 | 14 |
| 15 | 159.44 | wind | 5 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 18 | 159.50 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 14 |
| 26 | 159.66 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 15 |
| 29 | 159.68 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 5 |
| 32 | 159.70 | wind | 5 | 43200 | > th | dose independent | rect. | 9 | 12 |
| 38 | 159.86 | wind | 5 | 43200 | < th | dose independent | rect. | 9 | 12 |
| 39 | 159.89 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 6 |
| 114 | 160.52 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 132 | 160.71 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 165 | 161.07 | wind | 3 | 43200 | > th | dose dependent | rect. | 9 | 8 |
| 186 | 161.28 | wind | 5 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 208 | 161.64 | wind | 3 | 43200 | > th | dose dependent | rect. | 8 | 13 |
| 229 | 161.92 | wind | 3 | 43200 | > th | dose dependent | sin | 22 | NA |
| 282 | 162.51 | wind | 3 | 43200 | > th | dose dependent | rect. | 9 | 16 |
| 298 | 162.66 | wind | 3 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 352 | 163.27 | wind | 9 | 43200 | < th | dose dependent | rect. | 8 | 9 |
| 376 | 163.39 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 10 |
| 379 | 163.44 | wind | 9 | 43200 | < th | dose dependent | rect. | 9 | 7 |
| 382 | 163.47 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 395 | 163.54 | temperature | 20 | 1440 | > th | dose dependent | sin | 15 | NA |
| 409 | 163.65 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 500 | 164.32 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 549 | 164.71 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 580 | 164.93 | wind | 1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 625 | 165.22 | wind | 9 | 43200 | < th | dose dependent | rect. | 8 | 14 |
| 629 | 165.26 | wind | 9 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 712 | 165.95 | humidity | 80 | 43200 | < th | dose independent | rect. | 21 | 2 |
| 743 | 166.15 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 744 | 166.16 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 14 | 2 |
| 809 | 166.49 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 850 | 166.68 | humidity | 80 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 891 | 166.84 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 15 |
| 991 | 167.25 | wind | 9 | 43200 | < th | dose dependent | sin | 22 | NA |