Os10g0558600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein prenyltransferase domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os10g0558600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein prenyltransferase domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 138.96 | 0.554 | 5.21 | 1.9 | 2.11 | -0.285 | 1.44 | 3.49 | 0.377 | 20.2 | 19.4 | 1808 | -- | -- |
| 149.23 | 0.569 | 5.3 | 1.24 | 2.03 | -0.302 | 1.77 | -- | 0.205 | 20.1 | 15.18 | 27830 | -- | -- |
| 142.8 | 0.557 | 5.21 | 1.73 | 2.11 | -0.321 | -- | 3.97 | 0.377 | 20.3 | 18.94 | 613 | -- | -- |
| 154.93 | 0.58 | 5.28 | 1.23 | 2.1 | -0.498 | -- | -- | 0.285 | 20.2 | 12.97 | 19475 | -- | -- |
| 323.83 | 0.838 | 5.22 | 1.32 | -- | 1.37 | -- | 4.18 | 0.141 | -- | 24.5 | 561 | -- | -- |
| 150.31 | 0.575 | 5.33 | 0.883 | 2.09 | -- | 1.57 | -- | 0.0773 | 20.2 | -- | -- | -- | -- |
| 157.87 | 0.588 | 5.33 | 0.837 | 2.09 | -- | -- | -- | 0.0781 | 20.2 | -- | -- | -- | -- |
| 315.58 | 0.827 | 5.31 | 0.5 | -- | 1.7 | -- | -- | -0.0988 | -- | 24.5 | 575 | -- | -- |
| 166.66 | 0.601 | 5.39 | -- | 2.08 | 0.501 | -- | -- | -0.165 | 20.2 | 7.788 | 47520 | -- | -- |
| 398.22 | 0.932 | 5.28 | 0.822 | -- | -- | -- | -- | 0.0546 | -- | -- | -- | -- | -- |
| 176.34 | 0.621 | 5.35 | -- | 2.08 | -- | -- | -- | -0.0151 | 20.3 | -- | -- | -- | -- |
| 321.98 | 0.836 | 5.33 | -- | -- | 1.78 | -- | -- | -0.16 | -- | 24.5 | 579 | -- | -- |
| 416.05 | 0.952 | 5.3 | -- | -- | -- | -- | -- | -0.0366 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 134.49 | radiation | 20.0 | 270 | > th | dose independent | rect. | 11 | 3 |
| 2 | 134.67 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 11 | 3 |
| 4 | 135.20 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 10 | 5 |
| 6 | 135.45 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 20 | 14 |
| 10 | 135.53 | wind | 7.0 | 270 | < th | dose independent | rect. | 10 | 5 |
| 12 | 135.63 | radiation | 1.0 | 270 | < th | dose independent | rect. | 20 | 11 |
| 13 | 135.70 | radiation | 1.0 | 270 | < th | dose dependent | sin | 10 | NA |
| 14 | 135.71 | radiation | 40.0 | 270 | < th | dose independent | rect. | 6 | 14 |
| 15 | 135.71 | radiation | 1.0 | 270 | < th | dose independent | rect. | 20 | 14 |
| 16 | 135.71 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 11 | 3 |
| 23 | 135.83 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 10 | 5 |
| 26 | 135.87 | radiation | 40.0 | 270 | < th | dose independent | rect. | 13 | 22 |
| 27 | 135.97 | wind | 7.0 | 270 | < th | dose independent | rect. | 11 | 3 |
| 32 | 136.15 | radiation | 1.0 | 270 | < th | dose independent | sin | 10 | NA |
| 33 | 136.15 | radiation | 10.0 | 90 | > th | dose dependent | rect. | 12 | 6 |
| 46 | 136.16 | radiation | 1.0 | 270 | > th | dose independent | sin | 10 | NA |
| 58 | 136.33 | radiation | 20.0 | 270 | < th | dose independent | rect. | 6 | 14 |
| 62 | 136.37 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 6 | 13 |
| 85 | 136.47 | radiation | 1.0 | 270 | > th | dose independent | rect. | 17 | 17 |
| 94 | 136.54 | humidity | 90.0 | 90 | < th | dose independent | rect. | 6 | 5 |
| 95 | 136.54 | radiation | 1.0 | 270 | > th | dose independent | rect. | 18 | 15 |
| 106 | 136.62 | radiation | 40.0 | 30 | < th | dose dependent | sin | 16 | NA |
| 117 | 136.70 | radiation | 1.0 | 30 | > th | dose dependent | sin | 15 | NA |
| 135 | 136.76 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 17 | 19 |
| 136 | 136.77 | radiation | 40.0 | 270 | < th | dose independent | rect. | 15 | 19 |
| 142 | 136.82 | radiation | 40.0 | 270 | > th | dose independent | rect. | 12 | 1 |
| 155 | 136.83 | radiation | 1.0 | 270 | > th | dose independent | rect. | 5 | 4 |
| 161 | 136.86 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 11 | 3 |
| 182 | 136.93 | wind | 9.0 | 270 | < th | dose dependent | rect. | 11 | 3 |
| 190 | 136.97 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 10 | 19 |
| 202 | 137.00 | humidity | 90.0 | 270 | < th | dose independent | rect. | 10 | 5 |
| 215 | 137.04 | wind | 9.0 | 270 | < th | dose dependent | rect. | 10 | 5 |
| 216 | 137.04 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 23 | 8 |
| 217 | 137.05 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 19 |
| 218 | 137.05 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 19 |
| 229 | 137.12 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 15 | 19 |
| 240 | 137.18 | humidity | 90.0 | 270 | < th | dose independent | rect. | 11 | 3 |
| 249 | 137.26 | humidity | 70.0 | 270 | < th | dose independent | rect. | 11 | 3 |
| 250 | 137.26 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 10 | 5 |
| 252 | 137.26 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 10 | 5 |
| 317 | 137.41 | temperature | 10.0 | 270 | > th | dose independent | rect. | 10 | 5 |
| 318 | 137.41 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 10 | 5 |
| 319 | 137.41 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 19 |
| 357 | 137.49 | humidity | 90.0 | 10 | < th | dose independent | rect. | 6 | 6 |
| 364 | 137.50 | wind | 7.0 | 270 | < th | dose independent | rect. | 9 | 21 |
| 366 | 137.53 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 370 | 137.54 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 21 | 15 |
| 407 | 137.65 | temperature | 20.0 | 90 | > th | dose dependent | sin | 9 | NA |
| 411 | 137.68 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 10 | 5 |
| 412 | 137.69 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 11 | 3 |
| 415 | 137.69 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 11 | 3 |
| 421 | 137.72 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 19 |
| 457 | 137.77 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 21 |
| 462 | 137.77 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 21 |
| 488 | 137.81 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 20 | 15 |
| 504 | 137.84 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 20 | 3 |
| 514 | 137.88 | temperature | 10.0 | 270 | > th | dose independent | rect. | 11 | 3 |
| 515 | 137.88 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 11 | 3 |
| 516 | 137.88 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 11 | 3 |
| 517 | 137.88 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 21 |
| 525 | 137.90 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 10 | 5 |
| 551 | 137.94 | wind | 7.0 | 270 | < th | dose independent | rect. | 10 | 18 |
| 563 | 137.99 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 566 | 138.00 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 567 | 138.02 | wind | 7.0 | 10 | < th | dose independent | rect. | 12 | 18 |
| 591 | 138.06 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 14 | 21 |
| 593 | 138.06 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 1 | 11 |
| 594 | 138.07 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 20 | 3 |
| 607 | 138.12 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 15 | 19 |
| 617 | 138.16 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 17 | 16 |
| 627 | 138.20 | radiation | 20.0 | 10 | < th | dose independent | rect. | 9 | 14 |
| 631 | 138.22 | radiation | 20.0 | 90 | < th | dose independent | sin | 17 | NA |
| 677 | 138.27 | temperature | 25.0 | 270 | > th | dose independent | rect. | 11 | 3 |
| 699 | 138.34 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 12 | 4 |
| 714 | 138.36 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 8 | 15 |
| 724 | 138.39 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 15 | 19 |
| 728 | 138.41 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 21 |
| 729 | 138.42 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 733 | 138.43 | temperature | 20.0 | 30 | > th | dose independent | rect. | 6 | 6 |
| 736 | 138.44 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 739 | 138.45 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 8 |
| 752 | 138.48 | humidity | 50.0 | 90 | > th | dose independent | rect. | 17 | 18 |
| 772 | 138.52 | humidity | 70.0 | 270 | > th | dose independent | rect. | 5 | 5 |
| 829 | 138.58 | radiation | 20.0 | 270 | < th | dose independent | rect. | 6 | 3 |
| 835 | 138.58 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 844 | 138.61 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 6 | 3 |
| 878 | 138.64 | temperature | 15.0 | 270 | > th | dose independent | rect. | 6 | 14 |
| 887 | 138.66 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 889 | 138.66 | temperature | 10.0 | 270 | > th | dose independent | rect. | 20 | 10 |
| 890 | 138.66 | temperature | 30.0 | 270 | < th | dose independent | rect. | 20 | 10 |
| 891 | 138.66 | humidity | 50.0 | 270 | > th | dose independent | rect. | 20 | 10 |
| 894 | 138.66 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 20 | 10 |
| 895 | 138.66 | radiation | 20.0 | 270 | < th | dose independent | rect. | 20 | 10 |
| 899 | 138.66 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 14 |
| 937 | 138.68 | wind | 9.0 | 270 | < th | dose independent | rect. | 20 | 10 |
| 964 | 138.71 | wind | 1.0 | 270 | > th | dose independent | rect. | 10 | 5 |
| 967 | 138.71 | radiation | 40.0 | 270 | < th | dose independent | rect. | 4 | 23 |
| 979 | 138.74 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 10 | 1 |