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Os10g0556900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.94 (0.0265) R2 : 0.00667
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0978 (0.0559) R2dN8 : 0.00862 R2N8 : 0.00667
σ : 0.5
deviance : 114.62
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
90.89 0.448 7.93 0.0246 0.301 -0.99 -0.219 -0.608 -0.0354 16.5 77 1345 -- --
91.29 0.445 7.93 0.0539 0.303 -1.02 -0.138 -- -0.0336 16.7 77 1337 -- --
91 0.444 7.94 0.028 0.298 -0.992 -- -0.571 -0.0361 16.7 77 1337 -- --
91.33 0.445 7.93 0.0803 0.298 -1.02 -- -- -0.022 16.8 76.6 1324 -- --
95.28 0.455 7.93 0.0245 -- -1.09 -- -0.554 -0.0354 -- 76.86 1294 -- --
106.65 0.484 7.95 -0.00152 0.384 -- -0.0544 -- -0.0892 16.2 -- -- -- --
106.66 0.484 7.95 -0.00207 0.384 -- -- -- -0.0895 16.3 -- -- -- --
95.3 0.455 7.92 0.102 -- -1.03 -- -- -0.00996 -- 75.19 1263 -- --
91.26 0.445 7.93 -- 0.317 -0.927 -- -- -0.0277 17.2 76 1303 -- --
114.61 0.5 7.94 -0.0174 -- -- -- -- -0.0997 -- -- -- -- --
106.66 0.483 7.95 -- 0.384 -- -- -- -0.0893 16.3 -- -- -- --
95.57 0.455 7.93 -- -- -1.01 -- -- -0.0221 -- 75.61 1263 -- --
114.62 0.5 7.94 -- -- -- -- -- -0.0978 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 80.79 radiation 1.0 270 < th dose dependent rect. 5 21
3 81.35 temperature 10.0 270 > th dose dependent rect. 13 7
5 81.54 temperature 15.0 270 > th dose independent rect. 14 16
9 81.90 radiation 1.0 270 < th dose dependent rect. 9 17
11 81.94 radiation 1.0 270 < th dose dependent rect. 15 11
19 82.16 precipitation 0.1 270 < th dose independent rect. 14 16
21 82.16 precipitation 0.1 270 < th dose dependent rect. 14 16
22 82.17 radiation 1.0 270 < th dose independent rect. 6 20
23 82.18 precipitation 0.1 270 < th dose independent rect. 1 7
24 82.18 precipitation 0.1 270 < th dose dependent rect. 1 7
26 82.22 atmosphere 1010.0 270 < th dose independent rect. 12 9
29 82.29 atmosphere 1010.0 270 < th dose independent rect. 13 7
33 82.38 humidity 50.0 270 > th dose dependent rect. 8 17
36 82.49 precipitation 0.1 270 < th dose independent rect. 2 16
37 82.49 precipitation 0.1 270 < th dose dependent rect. 2 16
39 82.57 atmosphere 1010.0 270 < th dose independent rect. 13 18
40 82.58 wind 9.0 270 < th dose independent rect. 8 17
43 82.61 temperature 20.0 270 > th dose independent rect. 13 6
44 82.62 temperature 10.0 270 > th dose independent rect. 6 8
45 82.62 atmosphere 995.0 270 > th dose independent rect. 6 8
46 82.62 atmosphere 1015.0 270 < th dose independent rect. 6 8
50 82.65 wind 1.0 270 > th dose independent rect. 13 7
51 82.70 radiation 30.0 270 < th dose independent rect. 1 7
54 82.74 precipitation 0.1 270 < th dose independent rect. 13 7
56 82.74 precipitation 0.1 270 < th dose dependent rect. 13 7
58 82.77 radiation 1.0 270 < th dose independent rect. 9 17
63 82.81 wind 9.0 270 < th dose independent rect. 6 8
64 82.81 radiation 1.0 270 < th dose independent rect. 15 11
66 82.83 wind 7.0 270 < th dose independent rect. 1 7
73 82.88 temperature 10.0 270 > th dose independent rect. 1 7
75 82.88 temperature 30.0 270 < th dose independent rect. 1 7
76 82.88 humidity 50.0 270 > th dose independent rect. 1 7
78 82.88 atmosphere 995.0 270 > th dose independent rect. 1 7
79 82.88 atmosphere 1015.0 270 < th dose independent rect. 1 7
80 82.88 temperature 10.0 270 > th dose independent rect. 8 17
87 82.96 precipitation 0.1 270 < th dose independent rect. 6 8
88 82.96 precipitation 0.1 270 < th dose dependent rect. 6 8
92 83.02 radiation 1.0 270 < th dose independent rect. 18 8
103 83.16 humidity 60.0 270 > th dose independent rect. 18 8
104 83.17 radiation 40.0 270 < th dose dependent rect. 1 7
128 83.22 humidity 50.0 270 > th dose dependent rect. 18 7
135 83.25 wind 9.0 270 < th dose independent rect. 18 8
136 83.25 temperature 10.0 270 > th dose independent rect. 20 17
137 83.25 atmosphere 995.0 270 > th dose independent rect. 20 17
140 83.27 temperature 10.0 270 > th dose independent rect. 18 8
143 83.27 radiation 20.0 270 < th dose independent rect. 18 8
146 83.27 temperature 10.0 270 > th dose independent rect. 2 16
147 83.27 atmosphere 1015.0 270 < th dose independent rect. 2 16
158 83.34 humidity 90.0 270 < th dose independent rect. 13 7
159 83.38 humidity 50.0 270 > th dose independent rect. 8 17
163 83.41 atmosphere 995.0 270 > th dose independent rect. 18 8
165 83.41 wind 9.0 270 < th dose independent rect. 20 17
166 83.42 temperature 30.0 270 < th dose independent rect. 18 8
167 83.43 wind 9.0 270 < th dose independent rect. 14 16
186 83.50 temperature 10.0 270 > th dose dependent rect. 13 18
193 83.57 radiation 1.0 270 < th dose dependent sin 15 NA
225 83.72 radiation 1.0 270 > th dose independent rect. 14 16
259 83.98 wind 9.0 270 < th dose independent rect. 13 7
271 84.04 wind 9.0 270 < th dose independent rect. 2 16
273 84.06 humidity 50.0 270 > th dose independent rect. 20 17
278 84.10 precipitation 0.1 270 < th dose independent rect. 8 17
279 84.10 precipitation 0.1 270 < th dose dependent rect. 8 17
284 84.12 precipitation 0.1 270 < th dose independent rect. 20 17
285 84.12 precipitation 0.1 270 < th dose dependent rect. 20 17
287 84.13 precipitation 0.1 270 < th dose independent rect. 18 8
292 84.13 precipitation 0.1 270 < th dose dependent rect. 18 8
327 84.26 humidity 50.0 270 > th dose independent rect. 6 8
359 84.37 atmosphere 995.0 270 > th dose independent rect. 14 16
364 84.41 atmosphere 995.0 270 > th dose independent rect. 13 7
369 84.45 radiation 40.0 270 < th dose independent rect. 14 16
383 84.52 wind 1.0 270 > th dose independent rect. 7 6
430 84.67 atmosphere 995.0 270 > th dose independent rect. 2 16
431 84.68 radiation 1.0 270 > th dose independent sin 15 NA
460 84.76 wind 9.0 270 < th dose dependent rect. 1 7
481 84.90 wind 9.0 270 < th dose dependent rect. 18 7
489 84.94 radiation 1.0 270 < th dose independent sin 15 NA
523 85.07 temperature 15.0 10 > th dose independent rect. 16 17
577 85.28 wind 1.0 270 > th dose independent rect. 13 17
580 85.30 radiation 1.0 270 > th dose independent rect. 7 7
587 85.34 atmosphere 995.0 270 > th dose independent rect. 8 17
603 85.40 temperature 10.0 270 > th dose dependent rect. 2 17
608 85.45 precipitation 0.1 90 < th dose independent rect. 3 6
610 85.45 precipitation 0.1 90 < th dose dependent rect. 3 6
616 85.48 temperature 10.0 10 > th dose dependent rect. 16 17
625 85.54 wind 1.0 270 > th dose independent rect. 1 6
635 85.58 wind 9.0 270 < th dose dependent rect. 8 17
656 85.66 radiation 20.0 4320 > th dose dependent rect. 6 2
683 85.72 wind 3.0 43200 < th dose independent rect. 1 3
686 85.72 atmosphere 1015.0 10 < th dose independent rect. 16 17
688 85.73 wind 9.0 14400 < th dose independent rect. 5 6
727 85.83 humidity 50.0 270 > th dose dependent rect. 1 6
748 85.85 humidity 80.0 270 > th dose independent rect. 7 18
758 85.88 humidity 60.0 90 > th dose independent rect. 3 6
773 85.94 wind 3.0 43200 > th dose independent rect. 2 2
774 85.94 wind 9.0 90 < th dose independent rect. 3 6
775 85.94 temperature 10.0 90 > th dose independent rect. 3 6
778 85.94 atmosphere 995.0 90 > th dose independent rect. 3 6
779 85.94 atmosphere 1015.0 90 < th dose independent rect. 3 6
780 85.94 radiation 40.0 90 < th dose independent rect. 3 6
796 86.01 temperature 10.0 90 > th dose independent rect. 9 6
797 86.01 atmosphere 1015.0 90 < th dose independent rect. 9 6
814 86.06 temperature 30.0 90 < th dose independent rect. 3 6
833 86.10 radiation 1.0 270 > th dose independent rect. 14 5
858 86.12 wind 9.0 90 < th dose dependent rect. 3 6
891 86.22 wind 3.0 43200 < th dose independent rect. 1 6
920 86.30 wind 1.0 270 > th dose independent rect. 19 7
930 86.32 wind 3.0 43200 > th dose independent rect. 1 6
942 86.36 humidity 90.0 14400 > th dose dependent rect. 15 13
948 86.37 wind 1.0 270 > th dose dependent rect. 13 6
955 86.39 precipitation 0.1 10 < th dose independent rect. 16 17
957 86.39 precipitation 0.1 10 < th dose dependent rect. 16 17
963 86.41 humidity 90.0 14400 > th dose dependent rect. 15 17
966 86.42 humidity 90.0 14400 > th dose dependent rect. 15 19
1000 86.51 humidity 90.0 14400 > th dose dependent rect. 18 16