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Os10g0556200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to SPATULA.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.3 (0.0239) R2 : 0.806
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -2.65 (0.061) R2dE : 0.805 R2E : 0.805
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0781 (0.0503) R2dN8 : 0.00132 R2N8 : 0.000353
σ : 0.449
deviance : 92.87
__
_____
C
peak time of C : --
E
wheather : radiation
threshold : 14.2
memory length : 8
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 12.1
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
85.59 0.435 13.3 -0.296 0.904 -2.09 0.818 0.463 -0.112 8.99 10.36 10 13.6 --
85.8 0.431 13.3 -0.289 0.9 -2.08 0.519 -- -0.112 8.98 10.51 10 13.6 --
86.51 0.433 13.3 -0.269 0.832 -2.13 -- -0.288 -0.111 8.91 10.86 10 13.4 --
86.45 0.433 13.3 -0.257 0.872 -2.1 -- -- -0.0989 8.93 10.2 8 13.5 --
92.94 0.449 13.3 -0.183 -- -2.49 -- 0.234 -0.1 -- 16.67 10 12 --
147.43 0.569 13.3 -0.284 2.43 -- 0.574 -- -0.106 8.32 -- -- -- --
148.45 0.571 13.3 -0.267 2.43 -- -- -- -0.107 8.31 -- -- -- --
90.38 0.443 13.4 -0.312 -- -2.65 -- -- -0.106 -- 14.61 8 12.1 --
88.11 0.437 13.3 -- 0.928 -2.08 -- -- -0.0745 8.93 9.359 8 13.7 --
476.45 1.02 13.3 -0.252 -- -- -- -- -0.0804 -- -- -- -- --
150.34 0.574 13.3 -- 2.43 -- -- -- -0.0769 8.32 -- -- -- --
92.87 0.449 13.3 -- -- -2.65 -- -- -0.0781 -- 14.2 8 12.1 --
478.12 1.02 13.3 -- -- -- -- -- -0.0525 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 85.82 radiation 10.0 10 < th dose dependent sin 20 NA
2 86.27 humidity 50.0 270 > th dose independent rect. 15 4
10 89.43 radiation 10.0 90 < th dose dependent rect. 7 14
19 91.72 radiation 10.0 90 < th dose dependent rect. 9 12
21 92.00 radiation 1.0 30 > th dose independent sin 21 NA
22 92.00 radiation 1.0 30 < th dose independent sin 21 NA
27 92.41 radiation 10.0 90 < th dose dependent rect. 12 9
30 92.46 radiation 10.0 10 < th dose dependent rect. 7 14
43 93.23 temperature 10.0 270 > th dose dependent rect. 8 7
46 93.82 temperature 30.0 90 < th dose independent rect. 16 5
56 94.73 radiation 10.0 90 < th dose dependent rect. 15 6
57 94.86 humidity 50.0 270 > th dose independent rect. 15 17
65 95.19 radiation 1.0 30 < th dose independent rect. 7 14
74 95.43 radiation 40.0 270 < th dose dependent rect. 15 4
93 96.08 radiation 30.0 270 < th dose independent rect. 15 4
146 97.69 radiation 10.0 90 < th dose independent rect. 13 8
160 98.05 wind 9.0 270 < th dose independent rect. 20 19
161 98.05 precipitation 0.1 270 < th dose independent rect. 20 19
163 98.05 precipitation 0.1 270 < th dose dependent rect. 20 19
171 98.19 wind 1.0 270 > th dose independent rect. 15 5
182 98.49 temperature 10.0 270 > th dose independent rect. 15 5
183 98.49 atmosphere 1015.0 270 < th dose independent rect. 15 5
184 98.49 temperature 10.0 270 > th dose independent rect. 20 19
199 98.66 radiation 10.0 90 < th dose independent rect. 15 6
216 98.96 wind 9.0 270 < th dose independent rect. 15 5
222 99.04 radiation 1.0 270 > th dose independent rect. 9 6
237 99.18 wind 9.0 270 < th dose independent rect. 19 21
240 99.32 precipitation 0.1 270 < th dose independent rect. 19 21
241 99.32 precipitation 0.1 270 < th dose dependent rect. 19 21
261 99.57 atmosphere 995.0 270 > th dose independent rect. 20 19
269 99.72 temperature 10.0 270 > th dose independent rect. 16 3
271 99.72 atmosphere 1010.0 270 < th dose independent rect. 16 3
274 99.72 temperature 10.0 270 > th dose independent rect. 19 21
285 99.87 wind 1.0 270 > th dose independent rect. 16 3
293 99.94 humidity 50.0 270 > th dose independent rect. 3 16
294 99.97 humidity 50.0 90 > th dose dependent rect. 16 5
309 100.11 wind 9.0 270 < th dose independent rect. 16 3
340 100.49 precipitation 0.1 270 < th dose independent rect. 15 5
341 100.49 precipitation 0.1 270 < th dose dependent rect. 15 5
354 100.61 humidity 50.0 10 > th dose dependent rect. 16 5
364 100.73 radiation 10.0 270 < th dose independent rect. 17 1
376 100.85 atmosphere 995.0 270 > th dose independent rect. 15 5
381 100.88 wind 1.0 270 > th dose dependent rect. 15 5
415 101.34 radiation 30.0 270 < th dose independent rect. 15 17
431 101.60 precipitation 0.1 270 < th dose independent rect. 16 3
432 101.60 precipitation 0.1 270 < th dose dependent rect. 16 3
444 101.68 temperature 15.0 270 > th dose independent rect. 9 6
457 101.76 precipitation 0.1 270 < th dose independent rect. 9 6
458 101.76 precipitation 0.1 270 < th dose dependent rect. 9 6
482 101.96 atmosphere 995.0 270 > th dose dependent rect. 15 4
484 101.99 wind 7.0 270 < th dose independent rect. 9 6
559 102.55 atmosphere 995.0 270 > th dose independent rect. 16 3
565 102.60 atmosphere 1015.0 270 < th dose independent rect. 9 6
566 102.60 temperature 10.0 270 > th dose independent rect. 15 18
593 102.89 humidity 90.0 270 < th dose independent rect. 9 6
628 103.10 radiation 40.0 270 < th dose dependent rect. 3 16
638 103.20 radiation 10.0 270 > th dose independent rect. 10 4
641 103.21 atmosphere 1015.0 270 < th dose independent rect. 15 18
642 103.22 wind 9.0 270 < th dose independent rect. 15 18
662 103.35 radiation 20.0 270 < th dose dependent rect. 17 1
676 103.41 radiation 1.0 90 > th dose dependent sin 18 NA
699 103.57 radiation 1.0 30 > th dose dependent sin 16 NA
704 103.60 humidity 50.0 270 > th dose independent rect. 20 19
722 103.74 radiation 40.0 270 < th dose independent rect. 3 16
734 103.86 atmosphere 995.0 270 > th dose independent rect. 9 6
797 104.35 temperature 10.0 270 > th dose independent rect. 19 9
798 104.35 temperature 30.0 270 < th dose independent rect. 19 9
799 104.35 humidity 50.0 270 > th dose independent rect. 19 9
800 104.35 atmosphere 995.0 270 > th dose independent rect. 19 9
801 104.35 radiation 1.0 270 < th dose independent rect. 19 9
806 104.35 temperature 10.0 270 > th dose independent rect. 4 15
807 104.35 atmosphere 1015.0 270 < th dose independent rect. 4 15
808 104.35 radiation 1.0 270 < th dose dependent rect. 19 9
823 104.42 wind 9.0 270 < th dose independent rect. 19 9
849 104.59 radiation 10.0 90 > th dose independent rect. 11 7
869 104.62 radiation 40.0 270 < th dose independent rect. 13 21
889 104.78 temperature 10.0 270 > th dose dependent rect. 20 19
897 104.82 radiation 40.0 270 < th dose dependent rect. 15 17
968 105.22 precipitation 0.1 270 < th dose independent rect. 19 9
969 105.22 precipitation 0.1 270 < th dose dependent rect. 19 9