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Os10g0554300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Flavin-containing monooxygenase FMO family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.84 (0.0264) R2 : 0.658
β1 : -1.19 (0.0966) R2dD : 0.116 R2D : 0.0758
β2 : 2.71 (0.115) R2dC : 1.34 R2C : -0.0791
β3 : 1.51 (0.0987) R2dE : 0.555 R2E : -0.893
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.561 (0.0564) R2dN8 : 0.0994 R2N8 : 0.0601
σ : 0.489
deviance : 108.81
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_____
C
peak time of C : 14.3
E
wheather : radiation
threshold : 2.067
memory length : 8
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 4.37
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
100.02 0.47 6.82 -1.03 2.84 1.65 -3.68 -2.52 -0.531 14.1 1.233 9 4.91 --
104.09 0.479 6.84 -1.15 2.68 1.47 -1.15 -- -0.555 14.4 2.067 8 4.37 --
109.25 0.491 6.84 -1.18 2.65 1.49 -- 0.222 -0.568 14.2 1.233 9 4.91 --
108.81 0.489 6.84 -1.19 2.71 1.51 -- -- -0.561 14.3 2.067 8 4.37 --
125.44 0.522 6.86 -1.25 -- -1.55 -- 1.15 -0.59 -- 56.67 157 1.91 --
132.07 0.539 6.87 -1.21 1.53 -- -1.58 -- -0.592 16.3 -- -- -- --
138.95 0.552 6.88 -1.23 1.52 -- -- -- -0.601 16.3 -- -- -- --
130.73 0.533 6.86 -1.24 -- -1.51 -- -- -0.595 -- 39.97 200 2.2 --
145.6 0.565 6.81 -- 2.8 1.61 -- -- -0.429 14.2 1.765 3 4.76 --
263.65 0.759 6.87 -1.29 -- -- -- -- -0.641 -- -- -- -- --
178.64 0.625 6.85 -- 1.54 -- -- -- -0.464 16.3 -- -- -- --
164.32 0.597 6.86 -- -- -1.54 -- -- -0.449 -- 9.943 325 1.95 --
307.38 0.818 6.84 -- -- -- -- -- -0.498 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 93.17 temperature 25.0 270 < th dose independent rect. 3 3
2 95.08 temperature 25.0 270 < th dose independent rect. 2 5
4 96.22 humidity 50.0 270 > th dose dependent rect. 3 3
9 96.51 precipitation 0.1 270 < th dose independent rect. 3 3
10 96.51 precipitation 0.1 270 < th dose dependent rect. 3 3
11 96.59 wind 7.0 270 < th dose independent rect. 3 3
12 96.59 atmosphere 1010.0 270 < th dose independent rect. 3 3
14 96.65 temperature 10.0 270 > th dose independent rect. 3 3
17 96.65 humidity 50.0 270 > th dose independent rect. 3 3
20 96.65 atmosphere 995.0 270 > th dose independent rect. 3 3
22 96.65 radiation 20.0 270 < th dose independent rect. 3 3
25 96.65 temperature 10.0 270 > th dose independent rect. 6 21
30 96.74 radiation 40.0 270 < th dose dependent rect. 3 3
31 96.76 radiation 20.0 270 < th dose independent rect. 2 5
33 96.86 humidity 70.0 270 > th dose independent rect. 2 5
37 97.09 wind 7.0 270 < th dose independent rect. 2 5
38 97.09 precipitation 0.1 270 < th dose independent rect. 2 5
39 97.09 precipitation 0.1 270 < th dose dependent rect. 2 5
43 97.16 temperature 10.0 270 > th dose independent rect. 2 5
46 97.16 humidity 50.0 270 > th dose independent rect. 2 5
48 97.16 atmosphere 995.0 270 > th dose independent rect. 2 5
49 97.16 atmosphere 1015.0 270 < th dose independent rect. 2 5
51 97.16 temperature 10.0 270 > th dose independent rect. 7 19
52 97.23 precipitation 0.1 270 < th dose independent rect. 6 21
53 97.23 precipitation 0.1 270 < th dose dependent rect. 6 21
63 97.58 precipitation 0.1 270 < th dose independent rect. 7 19
64 97.58 precipitation 0.1 270 < th dose dependent rect. 7 19
66 97.64 wind 9.0 270 < th dose independent rect. 6 21
80 97.82 wind 9.0 270 < th dose independent rect. 7 19
84 97.96 humidity 50.0 270 > th dose independent rect. 6 21
86 98.10 humidity 50.0 270 > th dose independent rect. 7 19
100 98.48 wind 9.0 270 < th dose dependent rect. 3 4
112 99.01 wind 7.0 10 < th dose dependent rect. 5 4
115 99.08 atmosphere 995.0 270 > th dose independent rect. 7 19
122 99.28 humidity 90.0 270 > th dose independent rect. 4 1
141 99.42 atmosphere 995.0 270 > th dose independent rect. 6 21
167 99.72 atmosphere 995.0 270 > th dose dependent rect. 3 3
169 99.74 temperature 10.0 270 > th dose dependent rect. 3 3
178 99.86 radiation 1.0 270 < th dose dependent rect. 18 9
205 100.07 wind 1.0 270 > th dose independent rect. 12 9
209 100.15 wind 9.0 270 < th dose independent rect. 14 17
210 100.16 radiation 1.0 270 < th dose independent rect. 18 9
219 100.30 wind 9.0 270 < th dose independent rect. 7 7
232 100.37 precipitation 0.1 270 < th dose independent rect. 3 15
233 100.37 precipitation 0.1 270 < th dose dependent rect. 3 15
234 100.38 temperature 20.0 30 > th dose independent rect. 5 4
236 100.39 temperature 10.0 270 > th dose independent rect. 7 7
237 100.39 atmosphere 995.0 270 > th dose independent rect. 7 7
238 100.39 atmosphere 1015.0 270 < th dose independent rect. 7 7
239 100.39 temperature 10.0 270 > th dose independent rect. 14 17
257 100.47 precipitation 0.1 270 < th dose independent rect. 7 7
258 100.47 precipitation 0.1 270 < th dose dependent rect. 7 7
259 100.49 precipitation 0.1 10 < th dose independent rect. 9 20
260 100.49 precipitation 0.1 10 < th dose dependent rect. 9 20
262 100.54 radiation 40.0 10 < th dose independent rect. 5 4
263 100.58 precipitation 0.1 270 < th dose independent rect. 14 17
264 100.58 precipitation 0.1 270 < th dose dependent rect. 14 17
265 100.59 radiation 1.0 10 < th dose dependent sin 11 NA
268 100.62 precipitation 0.1 270 < th dose independent rect. 18 9
269 100.62 precipitation 0.1 270 < th dose dependent rect. 18 9
270 100.63 wind 7.0 10 < th dose independent rect. 5 4
272 100.63 temperature 10.0 10 > th dose independent rect. 5 4
274 100.63 temperature 30.0 10 < th dose independent rect. 5 4
275 100.63 humidity 50.0 10 > th dose independent rect. 5 4
277 100.63 atmosphere 995.0 10 > th dose independent rect. 5 4
278 100.63 atmosphere 1015.0 10 < th dose independent rect. 5 4
279 100.63 precipitation 0.1 10 < th dose independent rect. 5 4
280 100.63 temperature 10.0 10 > th dose independent rect. 9 20
281 100.63 precipitation 0.1 10 < th dose dependent rect. 5 4
283 100.65 humidity 60.0 270 > th dose independent rect. 18 9
313 100.83 atmosphere 995.0 90 > th dose independent rect. 9 18
314 100.86 wind 9.0 270 < th dose independent rect. 18 9
317 100.91 temperature 30.0 270 < th dose independent rect. 18 9
318 100.91 atmosphere 995.0 270 > th dose independent rect. 18 9
320 100.92 temperature 10.0 270 > th dose independent rect. 18 9
325 100.92 temperature 10.0 270 > th dose independent rect. 3 15
326 100.92 atmosphere 1015.0 270 < th dose independent rect. 3 15
343 101.12 wind 1.0 270 > th dose independent rect. 7 19
358 101.24 wind 9.0 270 < th dose independent rect. 3 15
359 101.29 radiation 1.0 270 > th dose independent rect. 7 7
365 101.35 wind 9.0 270 < th dose independent rect. 21 15
367 101.36 precipitation 0.1 270 < th dose independent rect. 12 9
368 101.36 precipitation 0.1 270 < th dose dependent rect. 12 9
374 101.41 wind 9.0 10 < th dose independent rect. 9 20
375 101.42 radiation 40.0 270 < th dose independent rect. 14 17
381 101.48 temperature 10.0 270 > th dose independent rect. 12 9
382 101.48 temperature 10.0 270 > th dose independent rect. 21 15
383 101.48 atmosphere 995.0 270 > th dose independent rect. 21 15
398 101.50 precipitation 0.1 270 < th dose independent rect. 21 15
400 101.50 atmosphere 995.0 10 > th dose independent rect. 9 20
401 101.50 precipitation 0.1 270 < th dose dependent rect. 21 15
410 101.59 wind 9.0 270 < th dose dependent rect. 7 19
411 101.62 radiation 1.0 10 > th dose independent rect. 16 17
412 101.64 wind 9.0 270 < th dose independent rect. 12 9
427 101.78 atmosphere 995.0 270 > th dose independent rect. 14 17
429 101.80 atmosphere 995.0 10 > th dose dependent rect. 5 4
442 101.84 temperature 10.0 10 > th dose dependent rect. 5 4
443 101.84 wind 9.0 90 < th dose dependent rect. 9 19
458 101.87 humidity 50.0 270 > th dose independent rect. 7 7
463 101.92 radiation 1.0 10 > th dose independent sin 11 NA
466 101.95 radiation 1.0 10 < th dose independent sin 11 NA
468 101.98 radiation 40.0 10 < th dose dependent rect. 5 4
477 102.09 atmosphere 1015.0 270 < th dose independent rect. 12 9
482 102.15 humidity 50.0 10 > th dose dependent rect. 5 4
483 102.16 wind 1.0 270 > th dose independent rect. 2 5
544 102.51 atmosphere 1015.0 270 < th dose independent rect. 7 19
545 102.52 wind 9.0 10 < th dose independent rect. 16 17
552 102.55 temperature 30.0 270 < th dose dependent rect. 3 3
567 102.59 temperature 30.0 270 < th dose independent rect. 7 19
606 102.86 radiation 1.0 10 > th dose independent rect. 9 7
615 102.94 humidity 50.0 270 > th dose independent rect. 21 15
631 103.02 temperature 10.0 1440 > th dose independent rect. 4 6
634 103.02 atmosphere 995.0 1440 > th dose independent rect. 4 6
635 103.02 atmosphere 1015.0 1440 < th dose independent rect. 4 6
636 103.02 temperature 10.0 1440 > th dose independent rect. 10 18
657 103.05 humidity 50.0 4320 > th dose independent rect. 4 6
661 103.06 atmosphere 995.0 270 > th dose independent rect. 3 15
663 103.07 atmosphere 995.0 10 > th dose independent rect. 9 7
667 103.08 radiation 40.0 10 < th dose independent rect. 16 17
670 103.11 temperature 10.0 10 > th dose independent rect. 9 7
672 103.11 atmosphere 1015.0 10 < th dose independent rect. 9 7
674 103.11 precipitation 0.1 10 < th dose independent rect. 9 7
675 103.11 temperature 10.0 10 > th dose independent rect. 16 17
676 103.11 precipitation 0.1 10 < th dose dependent rect. 9 7
709 103.21 wind 9.0 270 < th dose dependent rect. 18 8
731 103.29 wind 9.0 10 < th dose independent rect. 9 7
749 103.33 atmosphere 995.0 10 > th dose independent rect. 16 17
754 103.36 wind 1.0 270 > th dose independent rect. 3 3
767 103.43 radiation 1.0 270 < th dose independent rect. 3 12
849 103.75 atmosphere 1015.0 90 < th dose independent rect. 9 18
860 103.78 atmosphere 995.0 270 > th dose independent rect. 12 9
927 103.92 wind 1.0 270 > th dose independent rect. 7 6
940 103.97 radiation 1.0 10 > th dose independent rect. 5 4
966 104.01 temperature 30.0 270 < th dose dependent rect. 2 5
993 104.05 precipitation 0.1 10 < th dose independent rect. 16 17
995 104.05 precipitation 0.1 10 < th dose dependent rect. 16 17