Os10g0553800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Flavin-containing monooxygenase FMO family protein.
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Os10g0553800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Flavin-containing monooxygenase FMO family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 120.06 | 0.515 | 9.62 | -1.85 | 3.71 | -1.46 | 1.18 | -2.02 | -0.603 | 7.48 | 20.6 | 1411 | -- | -- |
| 127.32 | 0.526 | 9.55 | -1.48 | 3.7 | -1.15 | 1.2 | -- | -0.51 | 7.48 | 20.9 | 1305 | -- | -- |
| 123.86 | 0.518 | 9.62 | -1.81 | 3.71 | -1.47 | -- | -1.97 | -0.598 | 7.47 | 20.64 | 1392 | -- | -- |
| 131.14 | 0.533 | 9.56 | -1.43 | 3.71 | -1.19 | -- | -- | -0.518 | 7.44 | 20.8 | 1304 | -- | -- |
| 786.68 | 1.31 | 9.64 | -1.73 | -- | -1.5 | -- | -1.79 | -0.5 | -- | 21.4 | 684 | -- | -- |
| 160.86 | 0.595 | 9.62 | -1.96 | 3.71 | -- | 1.31 | -- | -0.803 | 7.52 | -- | -- | -- | -- |
| 165.63 | 0.603 | 9.63 | -1.93 | 3.71 | -- | -- | -- | -0.805 | 7.52 | -- | -- | -- | -- |
| 530.02 | 1.07 | 9.61 | -1.17 | -- | -2.47 | -- | -- | -0.14 | -- | 25.81 | 518 | -- | -- |
| 166.31 | 0.601 | 9.49 | -- | 3.76 | -1.85 | -- | -- | -0.239 | 7.41 | 20 | 4088 | -- | -- |
| 901.72 | 1.4 | 9.71 | -1.88 | -- | -- | -- | -- | -0.748 | -- | -- | -- | -- | -- |
| 263.93 | 0.76 | 9.58 | -- | 3.69 | -- | -- | -- | -0.59 | 7.56 | -- | -- | -- | -- |
| 560.24 | 1.1 | 9.5 | -- | -- | -2.76 | -- | -- | 0.195 | -- | 25.8 | 517 | -- | -- |
| 994.54 | 1.47 | 9.67 | -- | -- | -- | -- | -- | -0.539 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 120.22 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 9 |
| 3 | 120.35 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 9 |
| 30 | 121.31 | temperature | 20 | 1440 | > th | dose independent | sin | 9 | NA |
| 47 | 121.49 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 52 | 121.51 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 62 | 121.66 | temperature | 20 | 1440 | < th | dose independent | sin | 9 | NA |
| 357 | 123.15 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 384 | 123.28 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 23 |
| 405 | 123.39 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 23 |
| 419 | 123.47 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 428 | 123.59 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 23 |
| 528 | 124.83 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 539 | 124.92 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 601 | 125.85 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 611 | 125.98 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 6 |
| 661 | 126.82 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 2 |
| 664 | 126.86 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 6 |
| 666 | 126.90 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 684 | 127.20 | wind | 3 | 14400 | < th | dose dependent | rect. | 23 | 3 |
| 687 | 127.28 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 700 | 127.47 | wind | 3 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 701 | 127.48 | wind | 3 | 14400 | < th | dose dependent | rect. | 20 | 10 |
| 714 | 127.59 | temperature | 10 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 722 | 127.65 | wind | 3 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 792 | 128.11 | temperature | 25 | 1440 | < th | dose dependent | rect. | 9 | 21 |
| 794 | 128.12 | temperature | 25 | 1440 | < th | dose dependent | rect. | 10 | 19 |
| 799 | 128.14 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 17 |
| 820 | 128.31 | temperature | 25 | 1440 | < th | dose dependent | sin | 13 | NA |
| 891 | 128.62 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 17 |
| 894 | 128.63 | wind | 5 | 43200 | < th | dose dependent | rect. | 1 | 1 |