Os10g0553600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Exostosin-like family protein.
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Os10g0553600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Exostosin-like family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 44.42 | 0.313 | 10.5 | 0.719 | 1.87 | -0.68 | -0.432 | 1.45 | -0.187 | 5.46 | 19.75 | 2870 | -- | -- |
| 49.12 | 0.326 | 10.6 | 0.604 | 1.89 | -0.825 | -0.391 | -- | -0.227 | 5.47 | 20.3 | 5844 | -- | -- |
| 44.83 | 0.312 | 10.5 | 0.709 | 1.87 | -0.689 | -- | 1.41 | -0.187 | 5.49 | 19.6 | 2947 | -- | -- |
| 47.74 | 0.322 | 10.5 | 0.81 | 1.87 | -1.04 | -- | -- | -0.187 | 5.59 | 18.9 | 9957 | -- | -- |
| 122.99 | 0.517 | 10.5 | 0.732 | -- | -1.4 | -- | 1.55 | 0.129 | -- | 26.22 | 379 | -- | -- |
| 64.1 | 0.375 | 10.6 | -0.00101 | 1.84 | -- | -0.223 | -- | -0.46 | 5.49 | -- | -- | -- | -- |
| 64.22 | 0.375 | 10.6 | -0.00163 | 1.84 | -- | -- | -- | -0.459 | 5.5 | -- | -- | -- | -- |
| 128.3 | 0.528 | 10.5 | 0.407 | -- | -1.33 | -- | -- | -0.0607 | -- | 26.39 | 377 | -- | -- |
| 52.9 | 0.339 | 10.6 | -- | 1.87 | -0.543 | -- | -- | -0.269 | 5.37 | 22.3 | 2572 | -- | -- |
| 240.83 | 0.725 | 10.6 | 0.0592 | -- | -- | -- | -- | -0.414 | -- | -- | -- | -- | -- |
| 64.22 | 0.375 | 10.6 | -- | 1.84 | -- | -- | -- | -0.459 | 5.5 | -- | -- | -- | -- |
| 132.53 | 0.536 | 10.6 | -- | -- | -1.29 | -- | -- | -0.116 | -- | 26.32 | 375 | -- | -- |
| 240.92 | 0.724 | 10.6 | -- | -- | -- | -- | -- | -0.42 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 41.85 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 20 |
| 3 | 42.11 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 4 | 42.19 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 4 |
| 5 | 42.21 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 6 | 42.24 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 9 | 42.28 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 4 |
| 22 | 42.59 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 20 |
| 60 | 42.91 | humidity | 90 | 14400 | > th | dose dependent | sin | 4 | NA |
| 72 | 42.99 | humidity | 90 | 14400 | > th | dose dependent | rect. | 11 | 20 |
| 151 | 43.25 | humidity | 90 | 14400 | > th | dose dependent | rect. | 16 | 23 |
| 163 | 43.27 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |
| 207 | 43.38 | humidity | 90 | 14400 | > th | dose dependent | rect. | 12 | 16 |
| 226 | 43.42 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 23 |
| 247 | 43.49 | humidity | 90 | 14400 | > th | dose dependent | rect. | 2 | 23 |
| 271 | 43.62 | humidity | 90 | 14400 | > th | dose dependent | sin | 14 | NA |
| 272 | 43.62 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 3 |
| 284 | 43.65 | temperature | 20 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 300 | 43.73 | temperature | 20 | 1440 | < th | dose independent | rect. | 24 | 8 |
| 302 | 43.74 | temperature | 20 | 4320 | > th | dose independent | sin | 14 | NA |
| 309 | 43.77 | temperature | 20 | 4320 | < th | dose independent | sin | 14 | NA |
| 318 | 43.79 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 325 | 43.80 | temperature | 20 | 1440 | > th | dose independent | rect. | 24 | 8 |
| 393 | 43.99 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 395 | 44.00 | radiation | 30 | 4320 | < th | dose independent | rect. | 16 | 16 |
| 408 | 44.03 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 412 | 44.04 | temperature | 15 | 4320 | > th | dose dependent | rect. | 22 | 1 |
| 423 | 44.08 | humidity | 90 | 14400 | > th | dose independent | rect. | 22 | 15 |
| 444 | 44.13 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 4 |
| 451 | 44.14 | temperature | 25 | 4320 | < th | dose dependent | rect. | 22 | 1 |
| 453 | 44.15 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 463 | 44.16 | temperature | 10 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 468 | 44.17 | temperature | 25 | 1440 | < th | dose dependent | rect. | 2 | 1 |
| 475 | 44.18 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 477 | 44.18 | wind | 3 | 43200 | < th | dose dependent | rect. | 8 | 3 |
| 488 | 44.21 | temperature | 20 | 1440 | > th | dose independent | sin | 8 | NA |
| 500 | 44.24 | temperature | 20 | 1440 | < th | dose independent | sin | 8 | NA |
| 526 | 44.28 | temperature | 15 | 1440 | > th | dose dependent | rect. | 24 | 9 |
| 541 | 44.31 | humidity | 90 | 14400 | > th | dose independent | sin | 7 | NA |
| 562 | 44.33 | temperature | 30 | 1440 | < th | dose dependent | rect. | 24 | 9 |
| 593 | 44.37 | humidity | 90 | 14400 | > th | dose independent | rect. | 14 | 17 |
| 608 | 44.39 | humidity | 90 | 14400 | > th | dose independent | rect. | 14 | 14 |
| 613 | 44.39 | temperature | 30 | 1440 | < th | dose dependent | rect. | 22 | 11 |
| 662 | 44.44 | temperature | 15 | 1440 | > th | dose dependent | rect. | 22 | 6 |
| 733 | 44.51 | temperature | 20 | 270 | > th | dose independent | rect. | 21 | 20 |
| 826 | 44.57 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 1 |
| 894 | 44.61 | temperature | 10 | 270 | > th | dose dependent | rect. | 20 | 23 |
| 979 | 44.68 | humidity | 90 | 14400 | > th | dose independent | rect. | 18 | 17 |