Os10g0551700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor domain containing protein.
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Os10g0551700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 150.51 | 0.576 | 3.21 | -0.637 | 0.463 | 2.05 | -0.366 | -5.1 | 0.111 | 12.3 | 26.35 | 40 | -- | -- |
| 156.95 | 0.588 | 3.15 | -0.154 | 0.493 | 1.58 | -0.757 | -- | 0.206 | 12.9 | 26.35 | 40 | -- | -- |
| 150.51 | 0.571 | 3.2 | -0.631 | 0.494 | 2.12 | -- | -5.53 | 0.134 | 12.4 | 26.66 | 36 | -- | -- |
| 158.74 | 0.587 | 3.15 | -0.178 | 0.525 | 1.59 | -- | -- | 0.215 | 12.6 | 26.54 | 31 | -- | -- |
| 161.8 | 0.592 | 3.22 | -0.687 | -- | 2.43 | -- | -5.38 | 0.0904 | -- | 26.45 | 27 | -- | -- |
| 193.61 | 0.652 | 3.14 | 0.0445 | 0.969 | -- | -0.388 | -- | 0.252 | 13.8 | -- | -- | -- | -- |
| 194.2 | 0.653 | 3.14 | 0.0324 | 0.969 | -- | -- | -- | 0.25 | 13.8 | -- | -- | -- | -- |
| 170.47 | 0.611 | 3.17 | -0.251 | -- | 1.9 | -- | -- | 0.154 | -- | 25.8 | 27 | -- | -- |
| 159.52 | 0.588 | 3.14 | -- | 0.542 | 1.55 | -- | -- | 0.238 | 12.7 | 26.6 | 30 | -- | -- |
| 251.05 | 0.74 | 3.15 | -0.00739 | -- | -- | -- | -- | 0.228 | -- | -- | -- | -- | -- |
| 194.23 | 0.652 | 3.14 | -- | 0.968 | -- | -- | -- | 0.246 | 13.8 | -- | -- | -- | -- |
| 172.1 | 0.613 | 3.16 | -- | -- | 1.86 | -- | -- | 0.183 | -- | 25.8 | 27 | -- | -- |
| 251.05 | 0.74 | 3.15 | -- | -- | -- | -- | -- | 0.229 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 144.16 | temperature | 25 | 30 | > th | dose dependent | rect. | 8 | 10 |
| 13 | 146.31 | temperature | 25 | 90 | > th | dose dependent | rect. | 1 | 17 |
| 22 | 146.64 | temperature | 25 | 90 | > th | dose dependent | rect. | 21 | 21 |
| 54 | 148.73 | temperature | 25 | 90 | > th | dose dependent | sin | 0 | NA |
| 117 | 151.58 | temperature | 25 | 270 | > th | dose dependent | sin | 4 | NA |
| 125 | 152.09 | temperature | 25 | 10 | > th | dose dependent | rect. | 8 | 16 |
| 129 | 152.21 | temperature | 25 | 10 | > th | dose dependent | rect. | 8 | 22 |
| 130 | 152.22 | temperature | 25 | 10 | > th | dose dependent | rect. | 8 | 18 |
| 286 | 154.92 | temperature | 25 | 30 | > th | dose dependent | rect. | 5 | 19 |
| 287 | 154.93 | temperature | 25 | 30 | > th | dose dependent | rect. | 1 | 23 |
| 322 | 155.03 | temperature | 25 | 30 | > th | dose dependent | no | NA | NA |
| 497 | 156.85 | temperature | 10 | 30 | > th | dose dependent | sin | 23 | NA |
| 664 | 160.57 | temperature | 25 | 90 | > th | dose dependent | rect. | 11 | 23 |
| 684 | 161.05 | temperature | 25 | 90 | > th | dose dependent | rect. | 13 | 23 |
| 739 | 161.77 | temperature | 30 | 30 | < th | dose dependent | sin | 23 | NA |
| 744 | 161.90 | temperature | 25 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 760 | 162.11 | temperature | 25 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 783 | 162.35 | temperature | 25 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 824 | 163.10 | temperature | 30 | 10 | < th | dose independent | rect. | 17 | 21 |
| 859 | 163.38 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 14 |
| 902 | 163.64 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 15 |
| 981 | 163.67 | temperature | 30 | 90 | > th | dose independent | rect. | 8 | 10 |