Os10g0551100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0551100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 91.59 | 0.45 | 7.08 | -0.822 | 0.0628 | -1.46 | 1.16 | -0.837 | 0.31 | 2.63 | 24.27 | 62 | -- | -- |
| 92.45 | 0.448 | 7.09 | -0.951 | 0.0447 | -1.42 | 0.948 | -- | 0.305 | 2.59 | 23.78 | 67 | -- | -- |
| 95.06 | 0.454 | 7.09 | -0.924 | 0.0447 | -1.46 | -- | -0.202 | 0.314 | 2.82 | 23.53 | 62 | -- | -- |
| 95.09 | 0.454 | 7.09 | -0.959 | 0.0474 | -1.44 | -- | -- | 0.302 | 4.39 | 23.63 | 67 | -- | -- |
| 95.16 | 0.454 | 7.09 | -0.932 | -- | -1.45 | -- | -0.177 | 0.312 | -- | 23.5 | 62 | -- | -- |
| 119.32 | 0.512 | 7.04 | -0.612 | 0.175 | -- | -0.852 | -- | 0.52 | 13.9 | -- | -- | -- | -- |
| 121.9 | 0.517 | 7.04 | -0.639 | 0.181 | -- | -- | -- | 0.514 | 12.5 | -- | -- | -- | -- |
| 95.2 | 0.454 | 7.09 | -0.952 | -- | -1.42 | -- | -- | 0.308 | -- | 23.56 | 62 | -- | -- |
| 117.16 | 0.504 | 7.06 | -- | 0.00853 | -1.08 | -- | -- | 0.459 | 16.6 | 23.4 | 57 | -- | -- |
| 123.95 | 0.52 | 7.04 | -0.646 | -- | -- | -- | -- | 0.511 | -- | -- | -- | -- | -- |
| 132.68 | 0.539 | 7.02 | -- | 0.19 | -- | -- | -- | 0.586 | 12.7 | -- | -- | -- | -- |
| 117.16 | 0.504 | 7.05 | -- | -- | -1.08 | -- | -- | 0.458 | -- | 23.4 | 58 | -- | -- |
| 134.95 | 0.542 | 7.03 | -- | -- | -- | -- | -- | 0.583 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 91.47 | temperature | 25 | 30 | < th | dose dependent | rect. | 16 | 21 |
| 23 | 92.14 | temperature | 25 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 29 | 92.26 | temperature | 25 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 32 | 92.27 | temperature | 25 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 33 | 92.28 | temperature | 25 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 34 | 92.29 | temperature | 25 | 30 | < th | dose dependent | no | NA | NA |
| 35 | 92.29 | temperature | 25 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 37 | 92.29 | temperature | 25 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 43 | 92.36 | temperature | 25 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 47 | 92.41 | temperature | 25 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 66 | 92.71 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 206 | 95.18 | temperature | 25 | 720 | < th | dose dependent | rect. | 10 | 14 |
| 297 | 95.72 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 9 |
| 325 | 95.91 | temperature | 25 | 720 | < th | dose dependent | rect. | 16 | 6 |
| 333 | 95.96 | temperature | 25 | 720 | < th | dose dependent | rect. | 15 | 8 |
| 446 | 96.47 | temperature | 15 | 270 | > th | dose independent | rect. | 6 | 22 |
| 569 | 96.93 | temperature | 25 | 90 | < th | dose dependent | sin | 9 | NA |
| 647 | 97.29 | temperature | 20 | 90 | < th | dose dependent | sin | 7 | NA |
| 677 | 97.46 | temperature | 15 | 270 | > th | dose independent | rect. | 9 | 16 |
| 717 | 97.65 | temperature | 15 | 270 | > th | dose independent | rect. | 7 | 19 |
| 757 | 97.82 | humidity | 70 | 1440 | > th | dose dependent | rect. | 9 | 3 |
| 782 | 97.98 | temperature | 25 | 270 | < th | dose dependent | sin | 13 | NA |
| 825 | 98.20 | temperature | 25 | 720 | < th | dose dependent | sin | 19 | NA |
| 893 | 98.50 | humidity | 90 | 720 | > th | dose dependent | rect. | 8 | 13 |
| 905 | 98.56 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 9 |
| 919 | 98.65 | temperature | 15 | 270 | > th | dose independent | rect. | 21 | 15 |