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Os10g0550700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.29 (0.0332) R2 : 0.574
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.52 (0.0828) R2dC : 0.318 R2C : 0.282
β3 : -1.37 (0.125) R2dE : 0.114 R2E : 0.0663
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.925 (0.0702) R2dN8 : 0.214 R2N8 : 0.123
σ : 0.621
deviance : 177.66
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C
peak time of C : 20.9
E
wheather : temperature
threshold : 24.62
memory length : 12
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
165.36 0.604 7.27 0.634 1.5 -1.64 1.57 2.59 0.963 21 25.7 10 -- --
167.73 0.603 7.28 0.385 1.52 -1.42 1.44 -- 0.962 20.9 24.6 11 -- --
173.47 0.613 7.27 0.544 1.51 -1.65 -- 2.12 0.954 20.8 25.7 11 -- --
174.64 0.615 7.28 0.346 1.52 -1.46 -- -- 0.97 20.8 24.6 11 -- --
300.33 0.812 7.22 0.655 -- -1.85 -- 3.11 0.971 -- 25.7 11 -- --
197.94 0.66 7.31 0.173 1.61 -- 1.53 -- 0.827 22.2 -- -- -- --
207.29 0.674 7.31 0.114 1.6 -- -- -- 0.824 22.2 -- -- -- --
295.3 0.804 7.21 0.461 -- -1.72 -- -- 1.1 -- 20.4 6 -- --
177.66 0.621 7.29 -- 1.52 -1.37 -- -- 0.925 20.9 24.62 12 -- --
363.03 0.89 7.27 0.136 -- -- -- -- 0.827 -- -- -- -- --
207.63 0.674 7.32 -- 1.6 -- -- -- 0.811 22.2 -- -- -- --
300.65 0.81 7.23 -- -- -1.61 -- -- 1.03 -- 21.28 3 -- --
363.52 0.89 7.28 -- -- -- -- -- 0.812 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 152.88 temperature 15 720 > th dose dependent rect. 2 5
8 155.93 temperature 10 720 > th dose dependent rect. 19 18
13 156.59 temperature 30 720 < th dose dependent rect. 23 12
14 156.67 temperature 30 720 < th dose dependent rect. 24 10
22 157.18 temperature 10 720 > th dose dependent sin 8 NA
26 157.50 temperature 30 720 < th dose dependent sin 7 NA
59 158.91 temperature 10 270 > th dose dependent rect. 2 13
74 159.61 temperature 25 720 < th dose dependent rect. 1 6
86 159.91 temperature 20 720 > th dose independent rect. 4 1
106 160.29 temperature 30 270 < th dose dependent sin 2 NA
123 160.45 temperature 10 720 > th dose dependent rect. 3 10
128 160.52 temperature 10 270 > th dose dependent sin 4 NA
168 161.01 wind 9 43200 > th dose independent rect. 19 4
192 161.38 wind 9 43200 > th dose dependent rect. 19 4
224 161.70 wind 9 43200 < th dose independent rect. 19 4
240 161.87 wind 9 43200 > th dose independent rect. 19 6
246 161.93 temperature 30 270 < th dose dependent rect. 5 12
251 161.98 temperature 10 270 > th dose dependent sin 2 NA
257 162.05 wind 9 43200 < th dose independent rect. 19 6
261 162.09 radiation 1 4320 > th dose dependent rect. 18 12
262 162.11 radiation 1 4320 > th dose dependent rect. 4 2
295 162.32 temperature 25 10 > th dose dependent rect. 10 23
303 162.40 temperature 30 10 < th dose dependent rect. 7 13
330 162.66 wind 7 43200 > th dose dependent rect. 19 6
339 162.73 radiation 10 14400 < th dose independent rect. 17 1
350 162.80 radiation 10 14400 < th dose independent rect. 17 5
351 162.80 wind 9 43200 > th dose independent rect. 19 11
368 162.85 radiation 10 14400 < th dose independent rect. 17 7
369 162.86 radiation 10 14400 < th dose independent rect. 17 12
377 162.88 temperature 30 720 < th dose dependent rect. 5 5
380 162.89 radiation 10 14400 < th dose independent rect. 17 9
388 162.93 wind 9 43200 > th dose dependent rect. 19 11
424 163.27 temperature 25 10 > th dose dependent rect. 12 21
439 163.39 wind 9 43200 < th dose independent rect. 19 11
447 163.43 temperature 20 10 > th dose dependent rect. 4 18
453 163.47 temperature 30 10 < th dose dependent sin 22 NA
458 163.53 temperature 30 720 < th dose dependent rect. 7 2
460 163.54 temperature 30 30 < th dose dependent rect. 7 10
500 163.82 wind 9 43200 > th dose independent rect. 17 8
511 163.92 temperature 10 10 > th dose dependent sin 22 NA
542 164.10 radiation 40 4320 < th dose dependent rect. 1 5
580 164.26 radiation 40 4320 < th dose dependent rect. 3 3
598 164.33 radiation 40 4320 < th dose dependent rect. 18 12
620 164.41 wind 9 43200 > th dose dependent rect. 17 13
621 164.42 humidity 90 43200 < th dose independent rect. 4 5
673 164.59 radiation 40 4320 < th dose dependent rect. 18 4
709 164.78 wind 9 43200 > th dose independent rect. 17 13
711 164.79 radiation 1 14400 > th dose dependent rect. 18 1
718 164.79 radiation 20 4320 < th dose dependent rect. 23 7
729 164.82 wind 7 43200 > th dose independent rect. 18 18
766 164.95 radiation 40 14400 < th dose independent rect. 1 8
768 164.96 radiation 40 14400 < th dose independent rect. 17 16
770 164.97 radiation 40 14400 < th dose independent rect. 3 6
777 164.98 humidity 90 43200 > th dose independent rect. 6 1
789 165.02 radiation 1 14400 > th dose independent rect. 17 2
799 165.02 radiation 40 14400 < th dose independent rect. 23 10
813 165.05 radiation 30 4320 < th dose independent sin 11 NA
826 165.09 temperature 25 270 < th dose independent rect. 6 7
848 165.15 wind 7 43200 < th dose independent rect. 18 18
926 165.40 humidity 90 43200 > th dose independent rect. 4 5
950 165.47 wind 7 43200 > th dose independent rect. 15 21
970 165.52 radiation 20 4320 > th dose dependent rect. 16 16
983 165.57 humidity 90 43200 < th dose independent rect. 3 9
989 165.58 wind 7 43200 < th dose independent rect. 15 21