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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os10g0549200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Major sperm protein domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.93 (0.0267) R2 : 0.00412
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0771 (0.0561) R2dN8 : 0.00531 R2N8 : 0.00412
σ : 0.502
deviance : 115.74
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
108.28 0.489 2.92 -0.138 0.0922 0.77 0.519 -0.681 0.0867 8.88 57.61 10 -- --
108.4 0.485 2.93 -0.139 0.0966 0.954 0.474 -- 0.0848 8.59 57.92 9 -- --
108.93 0.486 2.93 -0.128 0.119 0.833 -- -0.313 0.0847 6.75 57.44 9 -- --
108.96 0.486 2.93 -0.128 0.115 0.921 -- -- 0.0836 6.67 57.64 9 -- --
109.61 0.488 2.93 -0.122 -- 0.854 -- -0.297 0.0871 -- 57.49 9 -- --
113.32 0.499 2.93 -0.206 0.138 -- 0.331 -- 0.0542 8.63 -- -- -- --
113.68 0.499 2.93 -0.195 0.139 -- -- -- 0.054 8.37 -- -- -- --
109.64 0.488 2.93 -0.124 -- 0.929 -- -- 0.0865 -- 57.54 9 -- --
109.37 0.487 2.92 -- 0.113 0.965 -- -- 0.0988 6.65 57.65 9 -- --
114.74 0.501 2.94 -0.195 -- -- -- -- 0.0555 -- -- -- -- --
114.68 0.501 2.93 -- 0.138 -- -- -- 0.0758 8.47 -- -- -- --
110.04 0.489 2.93 -- -- 0.971 -- -- 0.101 -- 57.56 9 -- --
115.74 0.502 2.93 -- -- -- -- -- 0.0771 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 104.28 atmosphere 1015.0 10 < th dose independent rect. 3 23
3 105.30 wind 1.0 10 < th dose dependent rect. 2 1
4 105.37 temperature 25.0 30 < th dose dependent rect. 2 1
5 105.60 humidity 90.0 10 > th dose dependent rect. 2 1
7 106.21 precipitation 0.1 10 < th dose independent rect. 3 23
8 106.21 precipitation 0.1 10 < th dose dependent rect. 3 23
11 106.43 temperature 25.0 90 > th dose dependent rect. 1 1
12 106.44 wind 1.0 30 > th dose independent rect. 2 1
13 106.47 atmosphere 1010.0 30 < th dose dependent rect. 2 1
14 106.48 humidity 90.0 10 > th dose independent rect. 2 1
17 106.62 atmosphere 1015.0 270 < th dose independent rect. 12 10
25 106.68 radiation 40.0 30 < th dose independent rect. 3 8
27 106.69 wind 9.0 30 < th dose independent rect. 3 23
28 106.70 wind 5.0 10 < th dose independent rect. 2 1
31 106.72 temperature 25.0 90 > th dose independent rect. 1 1
36 106.75 temperature 10.0 10 > th dose independent rect. 2 1
38 106.75 temperature 25.0 10 < th dose independent rect. 2 1
40 106.75 humidity 50.0 10 > th dose independent rect. 2 1
43 106.75 atmosphere 995.0 10 > th dose independent rect. 2 1
45 106.75 atmosphere 1010.0 10 < th dose independent rect. 2 1
47 106.75 radiation 1.0 10 < th dose independent rect. 2 1
52 106.75 precipitation 0.1 10 < th dose independent rect. 2 1
53 106.75 temperature 10.0 10 > th dose independent rect. 3 23
54 106.75 radiation 1.0 10 < th dose dependent rect. 2 1
59 106.75 precipitation 0.1 10 < th dose dependent rect. 2 1
65 106.79 radiation 40.0 10 < th dose dependent rect. 3 23
94 106.83 atmosphere 995.0 30 > th dose independent rect. 3 23
96 106.84 atmosphere 995.0 10 > th dose dependent rect. 2 1
97 106.86 wind 9.0 10 < th dose dependent rect. 2 1
98 106.86 radiation 1.0 43200 < th dose dependent rect. 3 1
109 106.90 temperature 10.0 30 > th dose dependent rect. 2 1
115 106.94 wind 9.0 1440 < th dose independent rect. 3 1
116 106.94 temperature 10.0 1440 > th dose independent rect. 3 1
119 106.94 temperature 30.0 1440 < th dose independent rect. 3 1
123 106.94 humidity 50.0 1440 > th dose independent rect. 3 1
132 106.94 atmosphere 995.0 1440 > th dose independent rect. 3 1
133 106.94 radiation 1.0 1440 < th dose independent rect. 3 1
153 106.94 temperature 10.0 1440 > th dose independent rect. 4 23
157 106.94 radiation 1.0 1440 < th dose dependent rect. 3 1
178 107.03 wind 1.0 10 < th dose independent rect. 2 1
192 107.19 radiation 40.0 30 < th dose independent rect. 3 23
199 107.30 humidity 50.0 10 > th dose independent rect. 3 23
201 107.35 radiation 40.0 10 < th dose independent rect. 3 21
212 107.51 wind 1.0 30 > th dose independent rect. 3 8
219 107.59 temperature 15.0 30 > th dose independent rect. 11 16
220 107.60 wind 9.0 30 < th dose independent rect. 3 8
221 107.60 temperature 10.0 30 > th dose independent rect. 3 8
223 107.60 humidity 50.0 30 > th dose independent rect. 3 8
224 107.60 atmosphere 995.0 30 > th dose independent rect. 3 8
225 107.60 atmosphere 1015.0 30 < th dose independent rect. 3 8
230 107.65 precipitation 0.1 30 < th dose independent rect. 3 8
232 107.65 precipitation 0.1 30 < th dose dependent rect. 3 8
238 107.76 precipitation 0.1 30 < th dose independent rect. 11 16
239 107.76 precipitation 0.1 30 < th dose dependent rect. 11 16
247 107.80 atmosphere 995.0 30 > th dose independent rect. 11 16
260 107.83 humidity 90.0 10 > th dose independent rect. 24 3
267 107.85 wind 1.0 10 > th dose independent rect. 15 18
270 107.86 wind 9.0 30 < th dose independent rect. 11 16
271 107.86 atmosphere 995.0 30 > th dose dependent rect. 3 8
286 107.93 wind 9.0 270 < th dose independent rect. 12 10
288 107.97 temperature 10.0 30 > th dose dependent rect. 3 8
298 108.03 temperature 10.0 1440 > th dose independent rect. 4 8
302 108.03 atmosphere 995.0 1440 > th dose independent rect. 4 8
303 108.03 temperature 10.0 1440 > th dose independent rect. 12 16
308 108.04 humidity 50.0 30 > th dose independent rect. 11 16
314 108.07 atmosphere 1015.0 270 < th dose independent rect. 1 22
316 108.08 atmosphere 1015.0 10 < th dose independent rect. 15 9
322 108.11 humidity 80.0 10 > th dose dependent rect. 24 3
324 108.12 wind 1.0 30 > th dose independent rect. 3 6
325 108.12 temperature 30.0 30 < th dose independent rect. 3 8
326 108.14 temperature 25.0 10 > th dose independent rect. 16 19
334 108.18 temperature 20.0 720 < th dose independent rect. 14 4
336 108.18 precipitation 0.1 270 < th dose independent rect. 22 14
338 108.18 precipitation 0.1 270 < th dose dependent rect. 22 14
343 108.25 humidity 50.0 270 > th dose independent rect. 22 14
345 108.25 atmosphere 995.0 90 > th dose dependent rect. 23 4
347 108.25 radiation 40.0 90 < th dose dependent rect. 3 8
349 108.27 wind 1.0 270 > th dose independent rect. 12 10
350 108.27 temperature 10.0 270 > th dose independent rect. 12 10
351 108.27 precipitation 0.1 270 < th dose independent rect. 12 10
352 108.27 temperature 10.0 270 > th dose independent rect. 22 14
354 108.27 atmosphere 995.0 270 > th dose independent rect. 22 14
355 108.27 precipitation 0.1 270 < th dose dependent rect. 12 10
356 108.28 precipitation 0.1 90 > th dose independent rect. 1 2
360 108.28 precipitation 0.1 90 > th dose dependent rect. 1 2
362 108.28 radiation 40.0 10 < th dose dependent rect. 3 21
363 108.29 precipitation 0.1 10 > th dose independent rect. 1 1
373 108.29 precipitation 0.1 10 > th dose dependent rect. 1 1
401 108.36 wind 1.0 10 > th dose independent rect. 15 20
429 108.43 wind 9.0 270 < th dose independent rect. 22 14
495 108.52 wind 1.0 90 > th dose independent rect. 11 16
511 108.54 atmosphere 1015.0 270 < th dose independent rect. 12 21
534 108.58 radiation 30.0 30 < th dose independent rect. 3 16
536 108.58 radiation 1.0 270 < th dose dependent rect. 15 12
539 108.59 wind 9.0 30 < th dose dependent rect. 11 16
548 108.62 temperature 30.0 90 < th dose independent rect. 3 6
552 108.62 atmosphere 1015.0 270 < th dose independent rect. 13 19
577 108.67 humidity 60.0 90 < th dose dependent rect. 9 1
592 108.68 atmosphere 995.0 270 > th dose independent rect. 12 10
607 108.72 radiation 1.0 270 < th dose independent rect. 15 12
618 108.73 humidity 50.0 30 > th dose dependent rect. 3 8
630 108.76 temperature 25.0 270 > th dose dependent rect. 23 3
638 108.78 wind 9.0 90 < th dose dependent rect. 3 8
640 108.79 humidity 80.0 10 > th dose independent rect. 12 1
642 108.79 wind 5.0 90 < th dose independent rect. 23 4
644 108.79 wind 1.0 270 > th dose independent rect. 8 19
651 108.82 humidity 60.0 90 < th dose independent rect. 9 1
686 108.86 temperature 30.0 30 < th dose independent rect. 11 16
695 108.88 radiation 30.0 30 < th dose independent rect. 3 14
698 108.88 radiation 40.0 270 < th dose dependent rect. 3 5
700 108.89 temperature 25.0 270 > th dose independent rect. 23 2
702 108.89 temperature 15.0 90 > th dose independent rect. 23 4
740 108.93 wind 1.0 270 > th dose independent rect. 22 15
790 109.00 temperature 30.0 270 < th dose independent rect. 22 14
799 109.01 wind 1.0 30 > th dose independent rect. 3 20
800 109.01 wind 9.0 90 < th dose independent rect. 3 20
810 109.02 atmosphere 995.0 270 > th dose dependent rect. 3 5
852 109.07 radiation 40.0 1440 < th dose independent rect. 16 8
860 109.08 wind 3.0 30 < th dose dependent rect. 11 16
862 109.09 humidity 50.0 1440 > th dose independent rect. 4 7
876 109.11 temperature 30.0 30 < th dose independent rect. 3 23
882 109.12 wind 1.0 10 > th dose independent rect. 13 22
920 109.18 temperature 30.0 90 < th dose independent rect. 23 4
921 109.18 humidity 50.0 90 > th dose independent rect. 23 4
924 109.18 atmosphere 995.0 90 > th dose independent rect. 23 4
925 109.18 radiation 1.0 90 < th dose independent rect. 23 4
931 109.18 temperature 10.0 90 > th dose independent rect. 3 20
932 109.18 radiation 1.0 90 < th dose dependent rect. 23 4
937 109.18 wind 9.0 270 < th dose dependent rect. 3 5
939 109.19 precipitation 0.1 90 < th dose independent rect. 23 4
946 109.19 precipitation 0.1 90 < th dose dependent rect. 23 4
966 109.21 atmosphere 1015.0 30 < th dose independent rect. 15 20