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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os10g0546100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Pollen Ole e 1 allergen and extensin domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.44 (0.0271) R2 : 0.000125
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0137 (0.0571) R2dN8 : 0.000162 R2N8 : 0.000125
σ : 0.511
deviance : 119.79
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
111.47 0.496 3.42 0.00506 0.261 -0.608 -0.165 4.62 0.00382 6.27 0.1228 10 -- --
115.98 0.502 3.44 -0.0457 0.229 0.244 -0.124 -- -0.00157 6.67 4.216e-05 6 -- --
111.53 0.492 3.42 0.003 0.26 -0.61 -- 4.64 0.00461 6.41 0.1145 9 -- --
114.67 0.499 3.43 -0.0475 0.185 0.395 -- -- 0.0206 7.02 1.457 2 -- --
114.94 0.499 3.43 0.00353 -- -0.423 -- 4.24 0.0133 -- 0.07444 9 -- --
116.57 0.506 3.44 -0.00914 0.248 -- -0.151 -- 0.00721 6.15 -- -- -- --
116.63 0.506 3.44 -0.0107 0.247 -- -- -- 0.00775 6.14 -- -- -- --
115.62 0.501 3.44 -0.0953 -- 0.376 -- -- 0.0253 -- 2.9 2 -- --
114.69 0.499 3.43 -- 0.179 0.377 -- -- 0.0227 7.12 1.6 2 -- --
119.79 0.511 3.44 -0.00379 -- -- -- -- 0.0132 -- -- -- -- --
116.63 0.505 3.44 -- 0.247 -- -- -- 0.00894 6.15 -- -- -- --
115.85 0.503 3.44 -- -- 0.345 -- -- 0.0342 -- 2.9 2 -- --
119.79 0.511 3.44 -- -- -- -- -- 0.0137 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 109.47 humidity 80 14400 < th dose dependent rect. 7 2
3 109.50 humidity 70 14400 > th dose independent rect. 8 1
4 109.54 humidity 70 14400 > th dose independent rect. 20 13
6 109.56 humidity 70 14400 > th dose independent rect. 4 5
17 109.77 humidity 70 14400 < th dose independent rect. 8 1
20 110.02 humidity 70 14400 < th dose independent rect. 20 13
33 110.41 wind 1 10 < th dose independent rect. 5 22
35 110.66 wind 1 10 < th dose independent rect. 14 13
36 110.71 wind 1 10 < th dose independent rect. 22 5
40 110.80 wind 1 14400 < th dose dependent rect. 4 3
41 110.83 wind 1 10 < th dose independent rect. 17 10
43 110.85 wind 1 30 < th dose dependent rect. 22 5
54 111.07 humidity 60 14400 < th dose dependent rect. 12 1
58 111.13 wind 1 10 < th dose independent rect. 8 19
71 111.16 humidity 50 14400 > th dose independent rect. 15 1
102 111.30 humidity 60 14400 < th dose dependent rect. 18 22
113 111.31 humidity 60 14400 < th dose dependent rect. 8 8
132 111.33 humidity 60 14400 < th dose dependent rect. 10 6
141 111.35 wind 1 30 < th dose dependent rect. 14 13
148 111.38 humidity 60 14400 < th dose dependent sin 5 NA
205 111.44 wind 1 10 < th dose dependent rect. 5 22
206 111.45 wind 1 10 < th dose independent rect. 23 1
210 111.45 wind 1 10 < th dose dependent rect. 23 1
217 111.46 wind 1 14400 < th dose independent rect. 5 2
240 111.49 atmosphere 1005 270 > th dose dependent rect. 2 1
242 111.49 wind 1 10 < th dose dependent rect. 7 19
254 111.52 wind 1 14400 > th dose independent rect. 5 2
257 111.52 wind 1 14400 < th dose dependent rect. 1 6
271 111.55 atmosphere 1015 14400 > th dose independent rect. 21 1
272 111.55 atmosphere 1015 14400 < th dose independent rect. 21 1
279 111.57 atmosphere 995 30 > th dose independent rect. 3 23
280 111.57 atmosphere 1005 10 > th dose dependent rect. 2 6
314 111.62 humidity 60 14400 < th dose dependent rect. 8 12
319 111.63 humidity 60 14400 < th dose dependent no NA NA
440 111.65 humidity 70 14400 < th dose dependent rect. 19 14
453 111.65 humidity 60 14400 < th dose dependent rect. 14 23
521 111.74 humidity 50 14400 > th dose independent rect. 14 22
531 111.75 wind 1 14400 < th dose dependent rect. 4 7
569 111.80 humidity 50 14400 > th dose independent rect. 13 7
577 111.80 humidity 50 14400 > th dose independent rect. 13 13
578 111.80 humidity 50 14400 > th dose independent rect. 13 16
583 111.80 atmosphere 1005 10 > th dose dependent rect. 2 2
612 111.82 humidity 60 14400 < th dose independent rect. 19 17
654 111.86 humidity 60 14400 < th dose independent rect. 10 2
679 111.86 humidity 50 14400 < th dose dependent sin 14 NA
682 111.87 humidity 50 14400 > th dose independent sin 17 NA
701 111.87 wind 1 10 < th dose dependent sin 17 NA
735 111.89 humidity 50 14400 > th dose independent rect. 18 23
738 111.89 atmosphere 1015 14400 > th dose dependent rect. 8 1
739 111.89 atmosphere 1015 14400 > th dose dependent rect. 2 2
740 111.89 atmosphere 1015 14400 > th dose dependent rect. 6 2
749 111.89 atmosphere 1015 14400 > th dose dependent rect. 1 6
763 111.90 atmosphere 1015 14400 < th dose independent rect. 4 1
768 111.90 humidity 50 14400 > th dose independent rect. 8 9
804 111.91 atmosphere 1015 14400 > th dose independent sin 8 NA
806 111.91 atmosphere 1015 14400 < th dose independent sin 8 NA
882 111.92 humidity 50 14400 > th dose independent no NA NA
893 111.92 humidity 50 14400 > th dose independent rect. 8 13
896 111.92 humidity 50 14400 > th dose independent rect. 6 14
936 111.92 humidity 50 14400 > th dose independent rect. 8 21